Strain Fitness in Escherichia fergusonii Becca around EFB2_04558

Experiment: phage mixed community; hk phage cocktail 1 MOI; 14 member community plus Klebsiella pneumoniae

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	phage mixed community; hk phage cocktail 1 MOI; 14 member community plus Klebsiella pneumoniae
4,787,516	+		EFB2_04556	0.73	-0.3
4,787,517	-		EFB2_04556	0.73	+1.0
4,787,588	-		EFB2_04556	0.80	+0.9
4,787,609	+		EFB2_04556	0.82	-0.0
4,787,609	+		EFB2_04556	0.82	-0.3
4,787,609	+		EFB2_04556	0.82	-1.5
4,787,609	+		EFB2_04556	0.82	-1.3
4,787,609	+		EFB2_04556	0.82	-1.5
4,787,609	+		EFB2_04556	0.82	-1.4
4,787,618	+		EFB2_04556	0.83	-0.1
4,787,618	+		EFB2_04556	0.83	-0.6
4,787,618	+		EFB2_04556	0.83	-0.0
4,787,618	+		EFB2_04556	0.83	+0.6
4,787,619	-		EFB2_04556	0.83	-0.5
4,787,619	-		EFB2_04556	0.83	-2.3
4,787,619	-		EFB2_04556	0.83	-0.3
4,787,628	+		EFB2_04556	0.84	+0.8
4,787,629	-		EFB2_04556	0.84	-1.0
4,787,664	+		EFB2_04556	0.88	+1.4
4,787,666	+		EFB2_04556	0.88	-1.1
4,787,666	+		EFB2_04556	0.88	+0.9
4,787,666	+		EFB2_04556	0.88	+0.2
4,787,666	+		EFB2_04556	0.88	-2.1
4,787,666	+		EFB2_04556	0.88	-0.7
4,787,666	+		EFB2_04556	0.88	+0.4
4,787,666	+		EFB2_04556	0.88	-2.4
4,787,666	+		EFB2_04556	0.88	+0.4
4,787,666	+		EFB2_04556	0.88	-1.1
4,787,666	+		EFB2_04556	0.88	+0.5
4,787,667	-		EFB2_04556	0.88	-1.3
4,787,667	-		EFB2_04556	0.88	-0.4
4,787,667	-		EFB2_04556	0.88	-1.3
4,787,667	-		EFB2_04556	0.88	+0.2
4,787,667	-		EFB2_04556	0.88	-1.0
4,787,667	-		EFB2_04556	0.88	-0.5
4,787,676	+		EFB2_04556	0.89	-1.2
4,787,676	+		EFB2_04556	0.89	-1.4
4,787,676	+		EFB2_04556	0.89	-2.0
4,787,676	+		EFB2_04556	0.89	+0.1
4,787,676	+		EFB2_04556	0.89	+1.4
4,787,676	+		EFB2_04556	0.89	-1.3
4,787,676	+		EFB2_04556	0.89	-0.9
4,787,677	-		EFB2_04556	0.89	+1.1
4,787,677	-		EFB2_04556	0.89	+1.0
4,787,677	-		EFB2_04556	0.89	-0.3
4,787,702	+				+1.3
4,787,703	-				-0.6
4,787,798	+				-0.0
4,787,809	+				-1.2
4,787,810	-				-0.9
4,787,823	+				+0.7
4,787,823	+				-2.0
4,787,823	+				-0.1
4,787,823	+				-0.4
4,787,823	+				+0.5
4,787,824	-				+0.4
4,787,824	-				-0.0
4,787,824	-				+0.4
4,787,826	+				-0.8
4,787,826	+				-0.4
4,787,826	+				+1.5
4,787,826	+				-0.8
4,787,826	+				-2.7
4,787,826	+				-0.1
4,787,826	+				-0.7
4,787,826	+				-2.8
4,787,826	+				+0.1
4,787,826	+				-0.2
4,787,826	+				+0.2
4,787,826	+				-0.6
4,787,826	+				-0.4
4,787,826	+				-3.0
4,787,826	+				+0.6
4,787,826	+				+0.1
4,787,826	+				-1.3
4,787,826	+				-3.8
4,787,826	+				+0.0
4,787,826	+				+0.5
4,787,826	+				-0.4
4,787,826	+				+0.0
4,787,827	-				-0.7
4,787,827	-				-0.0
4,787,827	-				-0.1
4,787,827	-				+0.1
4,787,827	-				+1.0
4,787,827	-				-1.3
4,787,827	-				+0.1
4,787,827	-				+0.5
4,787,827	-				+0.4
4,787,827	-				-0.1
4,787,827	-				+0.5
4,787,827	-				+0.3
4,787,827	-				+0.7
4,787,827	-				-1.5
4,787,827	-				+0.0
4,787,827	-				-0.1
4,787,827	-				+0.5
4,787,827	-				+1.2
4,787,827	-				+1.1
4,787,827	-				-1.2
4,787,827	-				-1.0
4,787,827	-				+0.7
4,787,827	-				-1.0
4,787,827	-				+0.2
4,787,827	-				-0.0
4,787,828	+				+1.7
4,787,828	+				-0.7
4,787,828	+				-0.2
4,787,828	+				-0.2
4,787,828	+				-1.4
4,787,828	+				-0.3
4,787,828	+				+0.2
4,787,828	+				+1.2
4,787,828	+				-0.3
4,787,828	+				-0.2
4,787,828	+				-1.3
4,787,828	+				-2.2
4,787,828	+				+0.7
4,787,828	+				+0.2
4,787,828	+				-0.2
4,787,828	+				-0.6
4,787,828	+				+1.5
4,787,828	+				-0.6
4,787,828	+				+0.2
4,787,828	+				-1.2
4,787,828	+				+0.2
4,787,828	+				-2.8
4,787,828	+				-0.2
4,787,828	+				+0.3
4,787,828	+				+0.1
4,787,828	+				-1.3
4,787,828	+				-0.1
4,787,828	+				-0.4
4,787,828	+				+2.5
4,787,828	+				+1.2
4,787,828	+				-0.2
4,787,828	+				+0.2
4,787,828	+				+0.6
4,787,828	+				-0.9
4,787,828	+				-1.1
4,787,828	+				+0.1
4,787,828	+				-0.4
4,787,828	+				+1.4
4,787,828	+				-0.5
4,787,828	+				-0.7
4,787,828	+				-1.1
4,787,828	+				+0.1
4,787,828	+				-0.7
4,787,828	+				+0.0
4,787,829	-				+0.9
4,787,829	-				+0.6
4,787,829	-				+0.6
4,787,829	-				+2.2
4,787,829	-				+0.3
4,787,829	-				-1.1
4,787,829	-				+1.0
4,787,829	-				+0.1
4,787,829	-				+0.0
4,787,829	-				+0.2
4,787,829	-				-1.0
4,787,829	-				+1.5
4,787,829	-				-0.1
4,787,829	-				+0.1
4,787,829	-				+0.6
4,787,829	-				-0.1
4,787,829	-				-0.5
4,787,829	-				-0.8
4,787,829	-				+0.8
4,787,829	-				+1.4
4,787,829	-				-0.4
4,787,829	-				-0.5
4,787,829	-				+0.1
4,787,829	-				-1.2
4,787,829	-				+0.3
4,787,829	-				+0.1
4,787,829	-				-0.0
4,787,829	-				-2.0
4,787,833	+				-1.6
4,787,833	+				+0.1
4,787,833	+				+1.8
4,787,834	-				-0.0
4,787,834	-				-0.3
4,787,840	+				-2.0
4,787,840	+				+0.6
4,787,840	+				-0.1
4,787,840	+				+0.6
4,787,841	-				+0.4
4,787,841	-				-0.8
4,787,887	+				-1.2
4,787,887	+				-0.7
4,787,887	+				+0.6
4,787,888	-				-0.7
4,787,888	-				+0.2
4,787,898	+				+0.4
4,787,898	+				-0.4
4,787,898	+				+0.2
4,787,898	+				-1.7
4,787,898	+				+1.6
4,787,898	+				-1.4
4,787,898	+				-1.4
4,787,898	+				-2.6
4,787,898	+				-0.3
4,787,898	+				-0.7
4,787,898	+				+0.3
4,787,898	+				-1.4
4,787,898	+				-0.2
4,787,898	+				+0.1
4,787,898	+				-2.2
4,787,898	+				-1.9
4,787,898	+				-0.8
4,787,898	+				-0.3
4,787,898	+				-0.3
4,787,898	+				-2.4
4,787,898	+				+0.2
4,787,898	+				-1.1
4,787,898	+				-1.6
4,787,898	+				-0.5
4,787,898	+				+0.6
4,787,898	+				-1.3
4,787,898	+				+0.2
4,787,898	+				+0.4
4,787,898	+				-0.4
4,787,898	+				+0.4
4,787,899	-				-1.4
4,787,899	-				-2.0
4,787,899	-				-1.8
4,787,899	-				+0.1
4,787,899	-				-0.8
4,787,899	-				+0.8
4,787,899	-				-0.1
4,787,899	-				+0.6
4,787,899	-				+0.6
4,787,899	-				+0.1
4,787,899	-				-1.3
4,787,899	-				+2.0
4,787,899	-				+0.3
4,787,899	-				-0.3
4,787,899	-				+0.9
4,787,899	-				-2.3
4,787,899	-				-0.8
4,787,899	-				+0.4
4,787,899	-				+0.6
4,787,899	-				-1.4
4,787,899	-				-0.2
4,787,903	+				+1.0
4,787,903	+				+2.2
4,787,903	+				+0.1
4,787,904	-				+0.6
4,787,904	-				-2.6
4,787,904	-				-1.6
4,787,908	+				-0.5
4,787,908	+				+0.2
4,787,908	+				-0.6
4,787,908	+				+0.0
4,787,908	+				-0.6
4,787,908	+				+0.4
4,787,908	+				-2.2
4,787,908	+				+0.5
4,787,908	+				-1.3
4,787,908	+				+1.2
4,787,908	+				-0.5
4,787,908	+				-1.3
4,787,908	+				-0.2
4,787,909	-				-0.3
4,787,909	-				-2.4
4,787,909	-				-2.0
4,787,909	-				-1.2
4,787,909	-				+0.6
4,787,909	-				-2.0
4,787,920	+				+0.2
4,787,968	+				-0.3
4,787,968	+				-0.1
4,787,968	+				-1.9
4,787,968	+				-0.2
4,787,968	+				+0.8
4,787,968	+				-0.3
4,787,968	+				-0.5
4,787,969	-				-1.6
4,787,969	-				-0.4
4,787,969	-				+0.9
4,787,969	-				-0.8
4,787,971	+				+0.9
4,787,971	+				-1.8
4,788,002	+		EFB2_04557	0.11	-2.0
4,788,002	+		EFB2_04557	0.11	-1.3
4,788,002	+		EFB2_04557	0.11	-2.0
4,788,002	+		EFB2_04557	0.11	-2.2
4,788,002	+		EFB2_04557	0.11	-0.5
4,788,002	+		EFB2_04557	0.11	-2.4
4,788,003	-		EFB2_04557	0.12	-1.1
4,788,003	-		EFB2_04557	0.12	-1.7
4,788,003	-		EFB2_04557	0.12	-0.4
4,788,075	+		EFB2_04557	0.26	+1.6
4,788,075	+		EFB2_04557	0.26	-0.5
4,788,075	+		EFB2_04557	0.26	-0.6
4,788,075	+		EFB2_04557	0.26	+0.2
4,788,075	+		EFB2_04557	0.26	-0.6
4,788,075	+		EFB2_04557	0.26	+0.7
4,788,076	-		EFB2_04557	0.26	-1.0
4,788,076	-		EFB2_04557	0.26	-0.5
4,788,076	-		EFB2_04557	0.26	-1.4
4,788,076	-		EFB2_04557	0.26	-0.0
4,788,133	-		EFB2_04557	0.37	-3.6
4,788,173	+		EFB2_04557	0.45	+0.6
4,788,173	+		EFB2_04557	0.45	-1.0
4,788,173	+		EFB2_04557	0.45	-0.1
4,788,174	-		EFB2_04557	0.45	+0.5
4,788,174	-		EFB2_04557	0.45	-0.7
4,788,174	-		EFB2_04557	0.45	-2.6
4,788,195	+		EFB2_04557	0.49	+0.2
4,788,195	+		EFB2_04557	0.49	+1.1
4,788,195	+		EFB2_04557	0.49	-2.8
4,788,195	+		EFB2_04557	0.49	-3.5
4,788,195	+		EFB2_04557	0.49	+0.2
4,788,195	+		EFB2_04557	0.49	-0.1
4,788,195	+		EFB2_04557	0.49	+0.9
4,788,195	+		EFB2_04557	0.49	-1.0
4,788,195	+		EFB2_04557	0.49	-1.3
4,788,195	+		EFB2_04557	0.49	-0.6
4,788,195	+		EFB2_04557	0.49	-0.1
4,788,195	+		EFB2_04557	0.49	+0.6
4,788,195	+		EFB2_04557	0.49	+0.7
4,788,195	+		EFB2_04557	0.49	+1.1
4,788,195	+		EFB2_04557	0.49	+0.1
4,788,195	+		EFB2_04557	0.49	-2.8
4,788,195	+		EFB2_04557	0.49	+0.5
4,788,195	+		EFB2_04557	0.49	-0.3
4,788,196	-		EFB2_04557	0.49	-3.9
4,788,196	-		EFB2_04557	0.49	-0.8
4,788,196	-		EFB2_04557	0.49	-0.5
4,788,196	-		EFB2_04557	0.49	-1.0
4,788,196	-		EFB2_04557	0.49	-1.0
4,788,196	-		EFB2_04557	0.49	+0.6
4,788,196	-		EFB2_04557	0.49	-2.3
4,788,196	-		EFB2_04557	0.49	-2.7
4,788,196	-		EFB2_04557	0.49	-0.1
4,788,196	-		EFB2_04557	0.49	-0.1
4,788,196	-		EFB2_04557	0.49	-3.4
4,788,196	-		EFB2_04557	0.49	-1.8
4,788,196	-		EFB2_04557	0.49	+0.3
4,788,230	+		EFB2_04557	0.56	+0.2
4,788,230	+		EFB2_04557	0.56	-2.8
4,788,230	+		EFB2_04557	0.56	+0.4
4,788,230	+		EFB2_04557	0.56	-1.3
4,788,230	+		EFB2_04557	0.56	+0.6
4,788,230	+		EFB2_04557	0.56	-1.7
4,788,230	+		EFB2_04557	0.56	-2.2
4,788,230	+		EFB2_04557	0.56	+0.4
4,788,231	-		EFB2_04557	0.56	-2.3
4,788,231	-		EFB2_04557	0.56	-1.6
4,788,231	-		EFB2_04557	0.56	+2.2
4,788,231	-		EFB2_04557	0.56	-0.8
4,788,231	-		EFB2_04557	0.56	-1.0
4,788,231	-		EFB2_04557	0.56	-0.4
4,788,231	-		EFB2_04557	0.56	+0.2
4,788,231	-		EFB2_04557	0.56	-2.2
4,788,245	+		EFB2_04557	0.59	+1.8
4,788,245	+		EFB2_04557	0.59	-0.2
4,788,245	+		EFB2_04557	0.59	-1.7
4,788,245	+		EFB2_04557	0.59	-0.1
4,788,245	+		EFB2_04557	0.59	+0.3
4,788,245	+		EFB2_04557	0.59	+2.2
4,788,245	+		EFB2_04557	0.59	-1.5
4,788,245	+		EFB2_04557	0.59	-1.8
4,788,246	-		EFB2_04557	0.59	-0.6
4,788,246	-		EFB2_04557	0.59	-0.6
4,788,246	-		EFB2_04557	0.59	-1.2
4,788,246	-		EFB2_04557	0.59	-0.1
4,788,308	+		EFB2_04557	0.71	+1.0
4,788,308	+		EFB2_04557	0.71	-0.6
4,788,308	+		EFB2_04557	0.71	-0.4
4,788,308	+		EFB2_04557	0.71	-0.6
4,788,308	+		EFB2_04557	0.71	+1.2
4,788,308	+		EFB2_04557	0.71	-0.3
4,788,308	+		EFB2_04557	0.71	-2.3
4,788,308	+		EFB2_04557	0.71	+0.3
4,788,308	+		EFB2_04557	0.71	+0.9
4,788,308	+		EFB2_04557	0.71	-1.4
4,788,308	+		EFB2_04557	0.71	-0.8
4,788,308	+		EFB2_04557	0.71	-1.9
4,788,308	+		EFB2_04557	0.71	-1.2
4,788,309	-		EFB2_04557	0.71	+2.6
4,788,309	-		EFB2_04557	0.71	-2.8
4,788,309	-		EFB2_04557	0.71	+1.2
4,788,309	-		EFB2_04557	0.71	-1.0
4,788,309	-		EFB2_04557	0.71	+0.5
4,788,309	-		EFB2_04557	0.71	+0.3
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