Strain Fitness in Escherichia fergusonii Becca around EFB2_02678

Experiment: phage mixed community; hk phage cocktail 1 MOI; 14 member community plus Klebsiella pneumoniae

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	phage mixed community; hk phage cocktail 1 MOI; 14 member community plus Klebsiella pneumoniae
2,833,284	+		EFB2_02676	0.61	+1.9
2,833,285	-		EFB2_02676	0.61	+0.9
2,833,285	-		EFB2_02676	0.61	-1.4
2,833,402	+		EFB2_02676	0.69	-0.4
2,833,423	+		EFB2_02676	0.70	-0.3
2,833,424	-		EFB2_02676	0.70	-0.1
2,833,445	+		EFB2_02676	0.72	+0.2
2,833,445	+		EFB2_02676	0.72	+0.5
2,833,445	+		EFB2_02676	0.72	+0.2
2,833,491	+		EFB2_02676	0.75	-2.4
2,833,491	+		EFB2_02676	0.75	+0.7
2,833,491	+		EFB2_02676	0.75	-0.3
2,833,494	+		EFB2_02676	0.75	+2.1
2,833,601	+		EFB2_02676	0.82	-0.9
2,833,608	+		EFB2_02676	0.83	+2.8
2,833,637	+		EFB2_02676	0.85	-1.3
2,833,637	+		EFB2_02676	0.85	+0.2
2,833,637	+		EFB2_02676	0.85	+0.8
2,833,637	+		EFB2_02676	0.85	+2.3
2,833,637	+		EFB2_02676	0.85	-1.8
2,833,638	-		EFB2_02676	0.85	-0.5
2,833,638	-		EFB2_02676	0.85	+1.0
2,833,665	+		EFB2_02676	0.87	+0.6
2,833,665	+		EFB2_02676	0.87	+2.2
2,833,665	+		EFB2_02676	0.87	+0.5
2,833,665	+		EFB2_02676	0.87	-0.4
2,833,665	+		EFB2_02676	0.87	+1.5
2,833,665	+		EFB2_02676	0.87	+0.9
2,833,695	+		EFB2_02676	0.89	+0.9
2,833,753	+				+0.9
2,833,753	+				+1.5
2,833,753	+				-0.3
2,833,755	+				+2.8
2,833,755	+				+0.8
2,833,755	+				-0.5
2,833,834	+				-0.1
2,833,834	+				+0.8
2,833,855	+				+0.8
2,833,855	+				+0.3
2,833,855	+				+0.2
2,833,856	-				+2.4
2,833,876	+				+1.3
2,833,884	+				-0.6
2,833,884	+				+0.1
2,833,884	+				-0.1
2,833,884	+				-0.5
2,833,884	+				-1.2
2,833,884	+				+0.3
2,833,891	+				+1.2
2,833,891	+				-0.8
2,833,891	+				-0.0
2,833,891	+				+2.5
2,833,905	+				-1.5
2,833,905	+				+0.6
2,833,905	+				-2.3
2,833,905	+				+1.2
2,833,905	+				-0.3
2,833,946	+		EFB2_02677	0.16	+0.9
2,833,946	+		EFB2_02677	0.16	+0.9
2,833,946	+		EFB2_02677	0.16	-1.3
2,833,946	+		EFB2_02677	0.16	-0.6
2,834,040	+		EFB2_02677	0.45	-1.2
2,834,172	+		EFB2_02677	0.85	+0.3
2,834,203	+				-0.4
2,834,203	+				+1.9
2,834,203	+				-0.1
2,834,203	+				+1.0
2,834,219	+				+1.1
2,834,219	+				+0.1
2,834,223	+				-0.1
2,834,242	+				-2.1
2,834,242	+				+0.6
2,834,266	+				+0.3
2,834,266	+				+1.1
2,834,266	+				+0.5
2,834,275	+				-2.7
2,834,275	+				+1.5
2,834,276	-				-1.1
2,834,415	+		EFB2_02678	0.14	-0.3
2,834,416	-		EFB2_02678	0.14	+0.1
2,834,431	-		EFB2_02678	0.16	-2.3
2,834,431	-		EFB2_02678	0.16	-0.6
2,834,469	+		EFB2_02678	0.19	+0.9
2,834,470	-		EFB2_02678	0.20	-0.7
2,834,470	-		EFB2_02678	0.20	-1.8
2,834,500	+		EFB2_02678	0.22	-0.8
2,834,500	+		EFB2_02678	0.22	-2.0
2,834,501	-		EFB2_02678	0.23	-1.1
2,834,501	-		EFB2_02678	0.23	-0.1
2,834,501	-		EFB2_02678	0.23	-1.9
2,834,501	-		EFB2_02678	0.23	-2.2
2,834,501	-		EFB2_02678	0.23	-1.4
2,834,501	-		EFB2_02678	0.23	-1.9
2,834,508	+		EFB2_02678	0.23	+0.1
2,834,509	-		EFB2_02678	0.23	-0.2
2,834,509	-		EFB2_02678	0.23	-0.5
2,834,521	+		EFB2_02678	0.25	-0.7
2,834,521	+		EFB2_02678	0.25	-0.5
2,834,522	-		EFB2_02678	0.25	-0.7
2,834,533	+		EFB2_02678	0.26	+0.5
2,834,533	+		EFB2_02678	0.26	+1.8
2,834,533	+		EFB2_02678	0.26	-0.5
2,834,533	+		EFB2_02678	0.26	-1.4
2,834,533	+		EFB2_02678	0.26	-1.2
2,834,533	+		EFB2_02678	0.26	+0.1
2,834,533	+		EFB2_02678	0.26	-0.9
2,834,533	+		EFB2_02678	0.26	+0.5
2,834,533	+		EFB2_02678	0.26	+0.2
2,834,533	+		EFB2_02678	0.26	+2.5
2,834,533	+		EFB2_02678	0.26	+0.9
2,834,533	+		EFB2_02678	0.26	+0.8
2,834,533	+		EFB2_02678	0.26	+2.3
2,834,533	+		EFB2_02678	0.26	+0.9
2,834,533	+		EFB2_02678	0.26	-1.2
2,834,533	+		EFB2_02678	0.26	+0.9
2,834,534	-		EFB2_02678	0.26	+0.5
2,834,534	-		EFB2_02678	0.26	-0.3
2,834,534	-		EFB2_02678	0.26	-1.0
2,834,534	-		EFB2_02678	0.26	-1.2
2,834,534	-		EFB2_02678	0.26	-0.5
2,834,534	-		EFB2_02678	0.26	-1.3
2,834,534	-		EFB2_02678	0.26	+0.8
2,834,534	-		EFB2_02678	0.26	+0.1
2,834,534	-		EFB2_02678	0.26	+1.1
2,834,534	-		EFB2_02678	0.26	+0.5
2,834,534	-		EFB2_02678	0.26	+1.1
2,834,534	-		EFB2_02678	0.26	+2.3
2,834,534	-		EFB2_02678	0.26	+1.9
2,834,547	+		EFB2_02678	0.27	+1.2
2,834,547	+		EFB2_02678	0.27	-0.8
2,834,563	+		EFB2_02678	0.29	+0.5
2,834,563	+		EFB2_02678	0.29	+3.1
2,834,563	+		EFB2_02678	0.29	+0.9
2,834,563	+		EFB2_02678	0.29	+0.5
2,834,563	+		EFB2_02678	0.29	+0.4
2,834,563	+		EFB2_02678	0.29	-0.7
2,834,564	-		EFB2_02678	0.29	+0.5
2,834,564	-		EFB2_02678	0.29	-0.9
2,834,564	-		EFB2_02678	0.29	-0.9
2,834,564	-		EFB2_02678	0.29	-0.8
2,834,564	-		EFB2_02678	0.29	-1.3
2,834,564	-		EFB2_02678	0.29	-1.4
2,834,564	-		EFB2_02678	0.29	-1.5
2,834,564	-		EFB2_02678	0.29	+2.3
2,834,564	-		EFB2_02678	0.29	+0.2
2,834,564	-		EFB2_02678	0.29	+1.0
2,834,564	-		EFB2_02678	0.29	+1.7
2,834,595	+		EFB2_02678	0.32	-2.2
2,834,721	-		EFB2_02678	0.44	-0.5
2,834,721	-		EFB2_02678	0.44	-0.9
2,834,721	-		EFB2_02678	0.44	-2.5
2,834,741	+		EFB2_02678	0.46	+2.5
2,834,741	+		EFB2_02678	0.46	-1.1
2,834,741	+		EFB2_02678	0.46	-1.3
2,834,742	-		EFB2_02678	0.47	-1.7
2,834,742	-		EFB2_02678	0.47	+1.5
2,834,742	-		EFB2_02678	0.47	-0.1
2,834,742	-		EFB2_02678	0.47	-0.7
2,834,814	-		EFB2_02678	0.54	+0.2
2,834,887	+		EFB2_02678	0.61	+0.5
2,834,887	+		EFB2_02678	0.61	-0.1
2,834,887	+		EFB2_02678	0.61	+0.2
2,834,887	+		EFB2_02678	0.61	+0.2
2,834,887	+		EFB2_02678	0.61	-1.2
2,834,887	+		EFB2_02678	0.61	-0.5
2,834,887	+		EFB2_02678	0.61	-1.1
2,834,888	-		EFB2_02678	0.61	+0.3
2,834,888	-		EFB2_02678	0.61	-0.9
2,834,888	-		EFB2_02678	0.61	-2.2
2,834,888	-		EFB2_02678	0.61	-1.6
2,834,888	-		EFB2_02678	0.61	-2.4
2,834,888	-		EFB2_02678	0.61	+1.9
2,834,888	-		EFB2_02678	0.61	-1.6
2,834,888	-		EFB2_02678	0.61	+1.2
2,834,888	-		EFB2_02678	0.61	+0.3
2,834,888	-		EFB2_02678	0.61	+1.8
2,834,888	-		EFB2_02678	0.61	-2.1
2,834,888	-		EFB2_02678	0.61	-0.1
2,834,888	-		EFB2_02678	0.61	-0.2
2,834,888	-		EFB2_02678	0.61	+0.5
2,834,888	-		EFB2_02678	0.61	-0.5
2,834,888	-		EFB2_02678	0.61	-0.1
2,834,891	+		EFB2_02678	0.61	-0.4
2,834,891	+		EFB2_02678	0.61	+0.1
2,834,891	+		EFB2_02678	0.61	-0.7
2,834,891	+		EFB2_02678	0.61	-0.9
2,834,892	-		EFB2_02678	0.61	+1.2
2,834,892	-		EFB2_02678	0.61	+2.0
2,834,892	-		EFB2_02678	0.61	+0.9
2,834,892	-		EFB2_02678	0.61	-1.1
2,834,928	-		EFB2_02678	0.65	+0.9
2,834,972	+		EFB2_02678	0.69	+0.0
2,834,983	-		EFB2_02678	0.71	-0.4
2,835,024	-		EFB2_02678	0.75	+0.7
2,835,024	-		EFB2_02678	0.75	-2.0
2,835,027	+		EFB2_02678	0.75	-1.4
2,835,028	-		EFB2_02678	0.75	-0.3
2,835,028	-		EFB2_02678	0.75	-1.3
2,835,028	-		EFB2_02678	0.75	-0.0
2,835,028	-		EFB2_02678	0.75	+0.7
2,835,028	-		EFB2_02678	0.75	+1.8
2,835,057	-		EFB2_02678	0.78	-0.3
2,835,112	-		EFB2_02678	0.83	-0.0
2,835,120	+		EFB2_02678	0.84	-0.9
2,835,120	+		EFB2_02678	0.84	-1.1
2,835,120	+		EFB2_02678	0.84	-0.3
2,835,121	-		EFB2_02678	0.84	+1.7
2,835,121	-		EFB2_02678	0.84	-1.5
2,835,121	-		EFB2_02678	0.84	+0.2
2,835,121	-		EFB2_02678	0.84	-2.6
2,835,121	-		EFB2_02678	0.84	+0.8
2,835,121	-		EFB2_02678	0.84	+0.1
2,835,121	-		EFB2_02678	0.84	-0.4
2,835,136	+		EFB2_02678	0.86	-0.8
2,835,136	+		EFB2_02678	0.86	-0.0
2,835,137	-		EFB2_02678	0.86	-2.1
2,835,137	-		EFB2_02678	0.86	+1.9
2,835,150	+		EFB2_02678	0.87	-0.9
2,835,151	-		EFB2_02678	0.87	-0.3
2,835,278	+				+0.5
2,835,278	+				+1.5
2,835,278	+				-1.2
2,835,279	-				+1.1
2,835,279	-				-0.5
2,835,279	-				-0.3
2,835,325	+				-1.1
2,835,326	-				-0.9
2,835,326	-				+0.4
2,835,349	+				-1.3
2,835,350	-				-1.9
2,835,350	-				+2.5
2,835,352	+				-1.1
2,835,353	-				-0.0
2,835,353	-				+0.3
2,835,353	-				+2.5
2,835,436	+		EFB2_02679	0.16	-0.9
2,835,437	-		EFB2_02679	0.16	+0.5
2,835,437	-		EFB2_02679	0.16	+0.3
2,835,437	-		EFB2_02679	0.16	+0.4
2,835,493	+		EFB2_02679	0.21	+0.2
2,835,494	-		EFB2_02679	0.22	+0.5
2,835,494	-		EFB2_02679	0.22	+1.9
2,835,494	-		EFB2_02679	0.22	+1.9
2,835,498	+		EFB2_02679	0.22	+1.0
2,835,499	-		EFB2_02679	0.22	+0.2
2,835,499	-		EFB2_02679	0.22	+0.9
2,835,499	-		EFB2_02679	0.22	+1.5
2,835,499	-		EFB2_02679	0.22	+1.3
2,835,499	-		EFB2_02679	0.22	+1.3
2,835,507	-		EFB2_02679	0.23	-1.9
2,835,507	-		EFB2_02679	0.23	-1.2
2,835,507	-		EFB2_02679	0.23	-0.8
2,835,507	-		EFB2_02679	0.23	+0.7
2,835,507	-		EFB2_02679	0.23	+0.1
2,835,507	-		EFB2_02679	0.23	-1.9
2,835,507	-		EFB2_02679	0.23	-2.4
2,835,507	-		EFB2_02679	0.23	-0.0
2,835,517	-		EFB2_02679	0.24	+0.3
2,835,517	-		EFB2_02679	0.24	-0.3
2,835,517	-		EFB2_02679	0.24	-0.3
2,835,517	-		EFB2_02679	0.24	-0.3
2,835,561	+		EFB2_02679	0.28	-1.5
2,835,561	+		EFB2_02679	0.28	+1.0
2,835,562	-		EFB2_02679	0.28	-0.2
2,835,562	-		EFB2_02679	0.28	+1.6
2,835,562	-		EFB2_02679	0.28	-2.4
2,835,562	-		EFB2_02679	0.28	-0.6
2,835,562	-		EFB2_02679	0.28	-0.1
2,835,562	-		EFB2_02679	0.28	+2.2
2,835,567	-		EFB2_02679	0.29	-1.6
2,835,567	-		EFB2_02679	0.29	+1.7
2,835,619	+		EFB2_02679	0.34	+1.5
2,835,620	-		EFB2_02679	0.34	+1.4
2,835,620	-		EFB2_02679	0.34	-2.0
2,835,620	-		EFB2_02679	0.34	-1.6
2,835,634	+		EFB2_02679	0.35	+1.3
2,835,635	-		EFB2_02679	0.36	-1.0
2,835,635	-		EFB2_02679	0.36	-0.7
2,835,660	-		EFB2_02679	0.38	-1.9
2,835,680	+		EFB2_02679	0.40	+1.1
2,835,681	-		EFB2_02679	0.40	-0.1
2,835,681	-		EFB2_02679	0.40	+1.3
2,835,681	-		EFB2_02679	0.40	+1.1
2,835,701	-		EFB2_02679	0.42	+0.5
2,835,701	-		EFB2_02679	0.42	+0.4
2,835,727	+		EFB2_02679	0.45	-0.5
2,835,727	+		EFB2_02679	0.45	+0.6
2,835,727	+		EFB2_02679	0.45	-1.7
2,835,728	-		EFB2_02679	0.45	+0.3
2,835,728	-		EFB2_02679	0.45	+1.4
2,835,728	-		EFB2_02679	0.45	+0.7
2,835,728	-		EFB2_02679	0.45	+0.6
2,835,728	-		EFB2_02679	0.45	-2.4
2,835,728	-		EFB2_02679	0.45	+0.0
2,835,737	+		EFB2_02679	0.46	-0.3
2,835,737	+		EFB2_02679	0.46	+0.8
2,835,737	+		EFB2_02679	0.46	-1.4
2,835,738	-		EFB2_02679	0.46	-2.5
2,835,738	-		EFB2_02679	0.46	+0.3
2,835,738	-		EFB2_02679	0.46	+0.3
2,835,738	-		EFB2_02679	0.46	+3.7
2,835,738	-		EFB2_02679	0.46	-0.5
2,835,738	-		EFB2_02679	0.46	-1.3
2,835,738	-		EFB2_02679	0.46	+1.1
2,835,738	-		EFB2_02679	0.46	+2.3
2,835,738	-		EFB2_02679	0.46	-0.8
2,835,738	-		EFB2_02679	0.46	-0.7
2,835,738	-		EFB2_02679	0.46	+1.9
2,835,738	-		EFB2_02679	0.46	+1.2
2,835,738	-		EFB2_02679	0.46	-2.5
2,835,738	-		EFB2_02679	0.46	-1.1
2,835,738	-		EFB2_02679	0.46	-1.5
2,835,738	-		EFB2_02679	0.46	+0.1
2,835,796	-		EFB2_02679	0.51	-1.2
2,835,812	-		EFB2_02679	0.53	+0.7
2,835,831	-		EFB2_02679	0.55	-0.9
2,835,880	+		EFB2_02679	0.60	-0.1
2,835,881	-		EFB2_02679	0.60	-2.4
2,835,881	-		EFB2_02679	0.60	-0.1
2,835,881	-		EFB2_02679	0.60	-1.3
2,835,881	-		EFB2_02679	0.60	-1.7
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