Strain Fitness in Escherichia fergusonii Becca around EFB2_02023

Experiment: phage mixed community; hk phage cocktail 1 MOI; 14 member community plus Klebsiella pneumoniae

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	phage mixed community; hk phage cocktail 1 MOI; 14 member community plus Klebsiella pneumoniae
2,179,276	-		EFB2_02022	0.48	-1.1
2,179,276	-		EFB2_02022	0.48	+1.3
2,179,276	-		EFB2_02022	0.48	+0.1
2,179,287	+		EFB2_02022	0.49	+1.1
2,179,287	+		EFB2_02022	0.49	+0.8
2,179,288	-		EFB2_02022	0.49	+1.7
2,179,288	-		EFB2_02022	0.49	-1.2
2,179,306	-		EFB2_02022	0.50	+0.8
2,179,316	+		EFB2_02022	0.51	-0.2
2,179,317	-		EFB2_02022	0.51	-0.1
2,179,317	-		EFB2_02022	0.51	+1.0
2,179,317	-		EFB2_02022	0.51	-1.1
2,179,317	-		EFB2_02022	0.51	-1.0
2,179,317	-		EFB2_02022	0.51	-0.4
2,179,347	+		EFB2_02022	0.53	+1.3
2,179,347	+		EFB2_02022	0.53	+2.0
2,179,347	+		EFB2_02022	0.53	+1.3
2,179,347	+		EFB2_02022	0.53	+0.9
2,179,347	+		EFB2_02022	0.53	-0.1
2,179,347	+		EFB2_02022	0.53	+0.9
2,179,347	+		EFB2_02022	0.53	+0.1
2,179,347	+		EFB2_02022	0.53	+0.8
2,179,347	+		EFB2_02022	0.53	+0.9
2,179,347	+		EFB2_02022	0.53	+0.4
2,179,347	+		EFB2_02022	0.53	-0.6
2,179,347	+		EFB2_02022	0.53	+1.9
2,179,347	+		EFB2_02022	0.53	+1.5
2,179,347	+		EFB2_02022	0.53	+0.9
2,179,347	+		EFB2_02022	0.53	-1.3
2,179,347	+		EFB2_02022	0.53	+1.5
2,179,348	-		EFB2_02022	0.54	-0.2
2,179,348	-		EFB2_02022	0.54	+0.8
2,179,348	-		EFB2_02022	0.54	+1.9
2,179,348	-		EFB2_02022	0.54	+0.6
2,179,348	-		EFB2_02022	0.54	+0.2
2,179,348	-		EFB2_02022	0.54	+2.3
2,179,348	-		EFB2_02022	0.54	+0.9
2,179,348	-		EFB2_02022	0.54	+1.9
2,179,348	-		EFB2_02022	0.54	+2.2
2,179,348	-		EFB2_02022	0.54	+0.6
2,179,348	-		EFB2_02022	0.54	-0.3
2,179,348	-		EFB2_02022	0.54	+2.0
2,179,348	-		EFB2_02022	0.54	+1.9
2,179,348	-		EFB2_02022	0.54	+0.7
2,179,398	+		EFB2_02022	0.57	+1.6
2,179,398	+		EFB2_02022	0.57	-0.2
2,179,398	+		EFB2_02022	0.57	-0.9
2,179,404	+		EFB2_02022	0.58	-1.3
2,179,405	-		EFB2_02022	0.58	+1.1
2,179,405	-		EFB2_02022	0.58	-0.9
2,179,405	-		EFB2_02022	0.58	-0.4
2,179,405	-		EFB2_02022	0.58	-0.1
2,179,405	-		EFB2_02022	0.58	-0.5
2,179,405	-		EFB2_02022	0.58	-3.1
2,179,405	-		EFB2_02022	0.58	-0.1
2,179,428	+		EFB2_02022	0.60	+0.8
2,179,429	-		EFB2_02022	0.60	+0.5
2,179,444	+		EFB2_02022	0.61	+0.2
2,179,466	+		EFB2_02022	0.63	+0.1
2,179,537	+		EFB2_02022	0.68	+0.9
2,179,537	+		EFB2_02022	0.68	+0.5
2,179,538	-		EFB2_02022	0.68	-2.3
2,179,538	-		EFB2_02022	0.68	-0.1
2,179,538	-		EFB2_02022	0.68	-3.0
2,179,538	-		EFB2_02022	0.68	+0.2
2,179,538	-		EFB2_02022	0.68	-1.4
2,179,541	+		EFB2_02022	0.68	+0.4
2,179,541	+		EFB2_02022	0.68	+1.1
2,179,541	+		EFB2_02022	0.68	+0.4
2,179,541	+		EFB2_02022	0.68	-0.5
2,179,541	+		EFB2_02022	0.68	+0.9
2,179,541	+		EFB2_02022	0.68	+0.5
2,179,541	+		EFB2_02022	0.68	+0.5
2,179,541	+		EFB2_02022	0.68	-0.5
2,179,541	+		EFB2_02022	0.68	+1.6
2,179,541	+		EFB2_02022	0.68	-2.2
2,179,541	+		EFB2_02022	0.68	+1.5
2,179,541	+		EFB2_02022	0.68	+0.4
2,179,541	+		EFB2_02022	0.68	-0.3
2,179,541	+		EFB2_02022	0.68	+1.5
2,179,541	+		EFB2_02022	0.68	-1.7
2,179,541	+		EFB2_02022	0.68	-1.2
2,179,542	-		EFB2_02022	0.68	-1.9
2,179,542	-		EFB2_02022	0.68	+0.6
2,179,542	-		EFB2_02022	0.68	-1.2
2,179,542	-		EFB2_02022	0.68	+0.2
2,179,542	-		EFB2_02022	0.68	-1.2
2,179,542	-		EFB2_02022	0.68	+4.0
2,179,542	-		EFB2_02022	0.68	-0.1
2,179,542	-		EFB2_02022	0.68	-0.5
2,179,542	-		EFB2_02022	0.68	-0.9
2,179,542	-		EFB2_02022	0.68	+0.8
2,179,542	-		EFB2_02022	0.68	+0.2
2,179,542	-		EFB2_02022	0.68	-1.0
2,179,542	-		EFB2_02022	0.68	-0.9
2,179,542	-		EFB2_02022	0.68	+4.0
2,179,555	-		EFB2_02022	0.69	-1.0
2,179,561	+		EFB2_02022	0.70	-1.9
2,179,562	-		EFB2_02022	0.70	+0.3
2,179,562	-		EFB2_02022	0.70	+0.1
2,179,566	+		EFB2_02022	0.70	+0.5
2,179,566	+		EFB2_02022	0.70	+0.5
2,179,566	+		EFB2_02022	0.70	+0.9
2,179,566	+		EFB2_02022	0.70	+1.5
2,179,566	+		EFB2_02022	0.70	+2.0
2,179,567	-		EFB2_02022	0.70	-1.1
2,179,567	-		EFB2_02022	0.70	+0.6
2,179,567	-		EFB2_02022	0.70	-1.5
2,179,567	-		EFB2_02022	0.70	+0.1
2,179,567	-		EFB2_02022	0.70	-0.1
2,179,567	-		EFB2_02022	0.70	+2.3
2,179,567	-		EFB2_02022	0.70	-0.1
2,179,593	+		EFB2_02022	0.72	-0.9
2,179,594	-		EFB2_02022	0.72	+1.5
2,179,594	-		EFB2_02022	0.72	-0.1
2,179,596	+		EFB2_02022	0.72	+0.6
2,179,596	+		EFB2_02022	0.72	-2.5
2,179,596	+		EFB2_02022	0.72	+0.1
2,179,596	+		EFB2_02022	0.72	-1.0
2,179,597	-		EFB2_02022	0.73	-2.2
2,179,597	-		EFB2_02022	0.73	-1.3
2,179,597	-		EFB2_02022	0.73	+1.2
2,179,617	+		EFB2_02022	0.74	+1.5
2,179,617	+		EFB2_02022	0.74	-0.1
2,179,617	+		EFB2_02022	0.74	+0.9
2,179,618	-		EFB2_02022	0.74	+1.2
2,179,618	-		EFB2_02022	0.74	+4.6
2,179,618	-		EFB2_02022	0.74	+1.7
2,179,618	-		EFB2_02022	0.74	-0.9
2,179,618	-		EFB2_02022	0.74	-1.7
2,179,618	-		EFB2_02022	0.74	+0.6
2,179,618	-		EFB2_02022	0.74	+2.1
2,179,620	+		EFB2_02022	0.74	-1.2
2,179,620	+		EFB2_02022	0.74	-3.1
2,179,620	+		EFB2_02022	0.74	+0.5
2,179,621	-		EFB2_02022	0.74	-1.9
2,179,621	-		EFB2_02022	0.74	+0.5
2,179,621	-		EFB2_02022	0.74	-1.3
2,179,621	-		EFB2_02022	0.74	+2.9
2,179,621	-		EFB2_02022	0.74	+0.8
2,179,621	-		EFB2_02022	0.74	-1.8
2,179,621	-		EFB2_02022	0.74	-1.1
2,179,638	-		EFB2_02022	0.76	+1.7
2,179,638	-		EFB2_02022	0.76	+1.8
2,179,700	+		EFB2_02022	0.80	-0.3
2,179,701	-		EFB2_02022	0.80	+1.1
2,179,710	+		EFB2_02022	0.81	+2.1
2,179,710	+		EFB2_02022	0.81	+0.0
2,179,710	+		EFB2_02022	0.81	+0.0
2,179,710	+		EFB2_02022	0.81	-0.2
2,179,711	-		EFB2_02022	0.81	+1.7
2,179,711	-		EFB2_02022	0.81	+0.5
2,179,711	-		EFB2_02022	0.81	+1.5
2,179,711	-		EFB2_02022	0.81	+0.7
2,179,711	-		EFB2_02022	0.81	-1.5
2,179,711	-		EFB2_02022	0.81	+2.2
2,179,711	-		EFB2_02022	0.81	+1.6
2,179,711	-		EFB2_02022	0.81	-0.7
2,179,725	+		EFB2_02022	0.82	-0.9
2,179,725	+		EFB2_02022	0.82	-0.1
2,179,726	-		EFB2_02022	0.82	+1.3
2,179,726	-		EFB2_02022	0.82	+0.6
2,179,726	-		EFB2_02022	0.82	-0.4
2,179,726	-		EFB2_02022	0.82	+0.8
2,179,776	-		EFB2_02022	0.86	-0.3
2,179,840	+				+0.2
2,179,840	+				-1.0
2,179,840	+				+0.1
2,179,841	-				-2.2
2,179,841	-				+1.5
2,179,841	-				-1.2
2,179,841	-				-0.0
2,179,841	-				+0.1
2,179,841	-				-2.4
2,179,841	-				+1.8
2,179,845	+				+2.3
2,179,845	+				-0.8
2,179,845	+				-1.7
2,179,845	+				+2.6
2,179,845	+				-0.6
2,179,846	-				+1.3
2,179,846	-				+1.0
2,179,846	-				-0.2
2,179,846	-				+0.9
2,179,846	-				-0.8
2,179,893	+				-2.1
2,179,893	+				+0.9
2,179,893	+				-0.5
2,179,893	+				+1.1
2,179,893	+				+1.4
2,179,914	+				-0.5
2,179,914	+				-1.6
2,179,915	-				-0.3
2,179,915	-				-0.2
2,179,915	-				+1.5
2,179,955	-				-2.1
2,179,972	+				-0.3
2,180,027	-				-0.1
2,180,084	+				-0.9
2,180,111	-				-1.3
2,180,183	+				-0.1
2,180,183	+				-0.1
2,180,184	-				-1.8
2,180,184	-				+0.4
2,180,184	-				-3.1
2,180,184	-				+1.9
2,180,184	-				-1.3
2,180,184	-				-1.3
2,180,203	+				+0.7
2,180,204	-				-0.9
2,180,249	-				+0.1
2,180,255	+				+0.9
2,180,255	+				-1.6
2,180,255	+				+1.5
2,180,255	+				+1.6
2,180,255	+				+0.3
2,180,255	+				+0.5
2,180,255	+				-2.0
2,180,255	+				-1.7
2,180,256	-				+0.6
2,180,256	-				+0.1
2,180,256	-				-0.7
2,180,256	-				+0.7
2,180,256	-				+1.1
2,180,256	-				-1.7
2,180,256	-				+2.3
2,180,256	-				-1.2
2,180,256	-				+0.1
2,180,256	-				+0.3
2,180,256	-				+0.5
2,180,257	+				-0.2
2,180,257	+				+0.3
2,180,257	+				-2.6
2,180,257	+				-1.3
2,180,257	+				+1.9
2,180,257	+				+0.9
2,180,257	+				-1.9
2,180,257	+				+0.1
2,180,257	+				-0.1
2,180,257	+				-0.1
2,180,257	+				-0.7
2,180,258	-				+2.1
2,180,258	-				-2.6
2,180,258	-				-0.2
2,180,258	-				+0.5
2,180,258	-				-0.3
2,180,258	-				-2.3
2,180,258	-				-0.3
2,180,258	-				+0.6
2,180,258	-				+0.5
2,180,258	-				+0.5
2,180,272	+				+2.6
2,180,273	-				+0.3
2,180,288	+				+1.0
2,180,288	+				-2.0
2,180,288	+				-2.3
2,180,288	+				+2.8
2,180,288	+				+0.3
2,180,288	+				-0.5
2,180,288	+				+0.4
2,180,288	+				-1.2
2,180,289	-				-2.3
2,180,289	-				+1.1
2,180,289	-				-1.0
2,180,289	-				+0.9
2,180,290	+				-0.9
2,180,304	+				-1.1
2,180,304	+				+1.0
2,180,304	+				-3.1
2,180,304	+				+0.6
2,180,304	+				-2.0
2,180,305	-				+0.6
2,180,305	-				+1.2
2,180,333	+				+0.1
2,180,333	+				-0.6
2,180,333	+				-2.3
2,180,333	+				-0.1
2,180,333	+				+1.1
2,180,333	+				+0.9
2,180,333	+				-1.3
2,180,333	+				-2.2
2,180,333	+				-0.5
2,180,333	+				-0.2
2,180,333	+				-0.1
2,180,334	-				-0.9
2,180,334	-				+0.5
2,180,334	-				-1.0
2,180,409	+		EFB2_02023	0.18	-0.9
2,180,409	+		EFB2_02023	0.18	-0.0
2,180,409	+		EFB2_02023	0.18	+0.5
2,180,410	-		EFB2_02023	0.19	+0.6
2,180,410	-		EFB2_02023	0.19	+0.5
2,180,430	+		EFB2_02023	0.21	-0.3
2,180,430	+		EFB2_02023	0.21	-0.3
2,180,430	+		EFB2_02023	0.21	+0.5
2,180,430	+		EFB2_02023	0.21	+0.6
2,180,431	-		EFB2_02023	0.22	-0.5
2,180,431	-		EFB2_02023	0.22	-1.3
2,180,434	+		EFB2_02023	0.22	+1.5
2,180,434	+		EFB2_02023	0.22	+2.7
2,180,434	+		EFB2_02023	0.22	-0.5
2,180,434	+		EFB2_02023	0.22	+1.4
2,180,434	+		EFB2_02023	0.22	+2.7
2,180,434	+		EFB2_02023	0.22	-1.3
2,180,434	+		EFB2_02023	0.22	+0.1
2,180,434	+		EFB2_02023	0.22	+0.6
2,180,435	-		EFB2_02023	0.22	-0.1
2,180,435	-		EFB2_02023	0.22	+1.4
2,180,435	-		EFB2_02023	0.22	+0.3
2,180,435	-		EFB2_02023	0.22	-0.5
2,180,435	-		EFB2_02023	0.22	+0.5
2,180,435	-		EFB2_02023	0.22	-1.1
2,180,435	-		EFB2_02023	0.22	+0.1
2,180,435	-		EFB2_02023	0.22	-1.7
2,180,435	-		EFB2_02023	0.22	-0.0
2,180,435	-		EFB2_02023	0.22	-1.5
2,180,435	-		EFB2_02023	0.22	+1.7
2,180,435	-		EFB2_02023	0.22	-1.8
2,180,435	-		EFB2_02023	0.22	+1.0
2,180,435	-		EFB2_02023	0.22	+0.1
2,180,450	+		EFB2_02023	0.24	-0.6
2,180,460	+		EFB2_02023	0.26	-0.5
2,180,460	+		EFB2_02023	0.26	+1.6
2,180,460	+		EFB2_02023	0.26	+1.6
2,180,476	+		EFB2_02023	0.28	-0.1
2,180,476	+		EFB2_02023	0.28	+1.1
2,180,477	-		EFB2_02023	0.28	+0.3
2,180,477	-		EFB2_02023	0.28	-0.1
2,180,477	-		EFB2_02023	0.28	-2.0
2,180,477	-		EFB2_02023	0.28	+0.8
2,180,483	+		EFB2_02023	0.29	-0.6
2,180,483	+		EFB2_02023	0.29	+0.9
2,180,483	+		EFB2_02023	0.29	+2.5
2,180,483	+		EFB2_02023	0.29	+3.7
2,180,483	+		EFB2_02023	0.29	-0.5
2,180,484	-		EFB2_02023	0.29	+0.3
2,180,484	-		EFB2_02023	0.29	+0.5
2,180,484	-		EFB2_02023	0.29	+0.3
2,180,484	-		EFB2_02023	0.29	-0.1
2,180,484	-		EFB2_02023	0.29	+0.4
2,180,484	-		EFB2_02023	0.29	+0.5
2,180,510	-		EFB2_02023	0.33	-0.1
2,180,586	+		EFB2_02023	0.43	+0.1
2,180,586	+		EFB2_02023	0.43	-0.4
2,180,647	-		EFB2_02023	0.52	+1.5
2,180,647	-		EFB2_02023	0.52	-1.1
2,180,656	+		EFB2_02023	0.53	+0.3
2,180,692	+		EFB2_02023	0.58	-0.9
2,180,692	+		EFB2_02023	0.58	+1.2
2,180,693	-		EFB2_02023	0.58	-0.8
2,180,693	-		EFB2_02023	0.58	-1.1
2,180,711	+		EFB2_02023	0.60	+1.0
2,180,712	-		EFB2_02023	0.61	+0.8
2,180,712	-		EFB2_02023	0.61	+3.1
2,180,712	-		EFB2_02023	0.61	+0.9
2,180,712	-		EFB2_02023	0.61	+2.0
2,180,756	-		EFB2_02023	0.67	-0.1
2,180,756	-		EFB2_02023	0.67	-0.5
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