Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_05560

Experiment: Rhamnogalacturonan I from potato pectic fiber 2.5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhamnogalacturonan I from potato pectic fiber 2.5 mg/mL (C)
1,075,464	-		BACOVA_05559	0.72	-1.2
1,075,491	+		BACOVA_05559	0.73	-0.5
1,075,493	+		BACOVA_05559	0.73	-2.0
1,075,501	-		BACOVA_05559	0.73	+1.6
1,075,502	+		BACOVA_05559	0.73	-0.5
1,075,558	+		BACOVA_05559	0.75	-0.3
1,075,560	+		BACOVA_05559	0.75	+0.9
1,075,564	+		BACOVA_05559	0.75	-0.2
1,075,564	+		BACOVA_05559	0.75	-0.9
1,075,565	-		BACOVA_05559	0.75	-0.1
1,075,623	-		BACOVA_05559	0.76	-0.9
1,075,623	-		BACOVA_05559	0.76	+0.8
1,075,633	+		BACOVA_05559	0.77	-0.6
1,075,633	+		BACOVA_05559	0.77	+0.5
1,075,634	-		BACOVA_05559	0.77	+0.4
1,075,652	-		BACOVA_05559	0.77	-2.4
1,075,654	+		BACOVA_05559	0.77	-2.0
1,075,700	+		BACOVA_05559	0.79	-1.4
1,075,794	-		BACOVA_05559	0.82	+0.3
1,075,806	+		BACOVA_05559	0.82	-0.7
1,075,807	-		BACOVA_05559	0.82	-0.5
1,075,807	-		BACOVA_05559	0.82	+0.2
1,075,815	-		BACOVA_05559	0.82	+1.1
1,075,841	+		BACOVA_05559	0.83	+1.1
1,075,842	-		BACOVA_05559	0.83	-0.9
1,075,887	-		BACOVA_05559	0.84	-0.7
1,075,890	+		BACOVA_05559	0.84	-0.1
1,075,891	-		BACOVA_05559	0.84	-1.4
1,075,891	-		BACOVA_05559	0.84	+0.7
1,075,891	-		BACOVA_05559	0.84	-0.7
1,075,893	-		BACOVA_05559	0.84	-0.0
1,075,897	-		BACOVA_05559	0.85	-0.6
1,075,922	+		BACOVA_05559	0.85	-0.2
1,075,928	+		BACOVA_05559	0.86	-0.4
1,075,928	+		BACOVA_05559	0.86	-1.1
1,075,991	-		BACOVA_05559	0.87	-1.4
1,076,023	+		BACOVA_05559	0.88	-0.2
1,076,024	-		BACOVA_05559	0.88	-0.2
1,076,031	+		BACOVA_05559	0.89	+0.8
1,076,035	-		BACOVA_05559	0.89	+0.3
1,076,046	-		BACOVA_05559	0.89	-0.1
1,076,118	+				+0.4
1,076,148	+				+1.1
1,076,149	-				-1.7
1,076,152	+				+0.9
1,076,152	+				+1.0
1,076,153	-				+0.7
1,076,159	+				-0.7
1,076,159	+				+1.1
1,076,159	+				+2.1
1,076,160	-				-0.2
1,076,160	-				-0.7
1,076,163	+				+0.7
1,076,163	+				-0.5
1,076,163	+				+0.2
1,076,164	-				-0.5
1,076,164	-				-0.0
1,076,164	-				-0.3
1,076,164	-				+1.1
1,076,164	-				+0.5
1,076,164	-				-1.6
1,076,164	-				-1.7
1,076,167	+				+0.3
1,076,167	+				+0.4
1,076,168	-				-1.9
1,076,168	-				-0.9
1,076,168	-				+0.1
1,076,168	-				+0.8
1,076,170	-				-0.8
1,076,171	+				-0.3
1,076,171	+				-0.8
1,076,172	-				-0.3
1,076,174	+				-0.2
1,076,217	-				-0.4
1,076,228	+				+0.5
1,076,277	-				-0.5
1,076,290	+				-0.4
1,076,290	+				-2.8
1,076,291	-				-1.7
1,076,292	+				+0.7
1,076,292	+				-1.1
1,076,293	-				+0.3
1,076,297	+				+0.7
1,076,297	+				+1.1
1,076,298	-				+1.1
1,076,298	-				+0.9
1,076,331	-				+0.3
1,076,336	+				-2.4
1,076,336	+				+0.8
1,076,337	-				-0.1
1,076,337	-				+1.5
1,076,340	+				-0.5
1,076,340	+				-1.6
1,076,341	-				+1.1
1,076,341	-				+0.4
1,076,342	+				+1.8
1,076,412	+				+0.7
1,076,428	-				-1.7
1,076,448	+				+0.9
1,076,448	+				+0.8
1,076,448	+				+1.1
1,076,449	-				-0.1
1,076,449	-				-0.9
1,076,481	+				-0.2
1,076,482	-				-0.0
1,076,482	-				-1.6
1,076,508	+				+1.8
1,076,509	-				-0.6
1,076,516	-				+1.2
1,076,631	+		BACOVA_05560	0.12	-0.3
1,076,632	-		BACOVA_05560	0.12	-0.6
1,076,634	+		BACOVA_05560	0.12	-0.2
1,076,651	-		BACOVA_05560	0.13	-1.0
1,076,669	+		BACOVA_05560	0.14	-0.7
1,076,702	+		BACOVA_05560	0.16	-0.3
1,076,703	-		BACOVA_05560	0.16	-0.0
1,076,785	+		BACOVA_05560	0.21	-0.0
1,076,786	-		BACOVA_05560	0.22	+0.1
1,076,812	+		BACOVA_05560	0.23	-0.5
1,076,812	+		BACOVA_05560	0.23	-1.2
1,076,813	-		BACOVA_05560	0.23	-1.2
1,076,922	-		BACOVA_05560	0.30	-0.2
1,076,970	-		BACOVA_05560	0.33	-0.2
1,076,970	-		BACOVA_05560	0.33	+0.1
1,077,041	+		BACOVA_05560	0.37	+0.7
1,077,042	-		BACOVA_05560	0.37	-0.1
1,077,042	-		BACOVA_05560	0.37	-0.1
1,077,059	-		BACOVA_05560	0.38	-0.3
1,077,159	-		BACOVA_05560	0.45	+0.3
1,077,159	-		BACOVA_05560	0.45	-0.2
1,077,212	+		BACOVA_05560	0.48	-0.7
1,077,213	-		BACOVA_05560	0.48	-0.2
1,077,213	-		BACOVA_05560	0.48	+0.2
1,077,257	-		BACOVA_05560	0.51	-0.0
1,077,291	-		BACOVA_05560	0.53	-0.4
1,077,342	-		BACOVA_05560	0.56	-0.1
1,077,412	+		BACOVA_05560	0.60	-0.5
1,077,438	+		BACOVA_05560	0.62	+0.9
1,077,438	+		BACOVA_05560	0.62	-1.0
1,077,443	-		BACOVA_05560	0.62	-0.4
1,077,452	+		BACOVA_05560	0.63	-0.5
1,077,453	-		BACOVA_05560	0.63	-0.6
1,077,453	-		BACOVA_05560	0.63	-0.1
1,077,546	-		BACOVA_05560	0.69	+0.5
1,077,600	+		BACOVA_05560	0.72	-0.1
1,077,601	-		BACOVA_05560	0.72	+0.1
1,077,601	-		BACOVA_05560	0.72	-1.2
1,077,672	-		BACOVA_05560	0.76	-0.8
1,077,676	+		BACOVA_05560	0.77	+0.2
1,077,676	-		BACOVA_05560	0.77	+0.1
1,077,740	-		BACOVA_05560	0.81	-1.8
1,077,934	-				-0.7
1,077,964	+				+1.3
1,077,965	-				-0.4
1,078,045	+				+1.4
1,078,050	-				-0.0
1,078,061	+				-0.4
1,078,075	+				+0.6
1,078,076	-				-1.4
1,078,181	+		BACOVA_05561	0.10	+0.3
1,078,181	+		BACOVA_05561	0.10	+0.0
1,078,182	-		BACOVA_05561	0.11	-0.6
1,078,182	-		BACOVA_05561	0.11	+1.3
1,078,182	-		BACOVA_05561	0.11	+0.3
1,078,183	+		BACOVA_05561	0.11	+0.4
1,078,184	-		BACOVA_05561	0.11	-1.1
1,078,193	+		BACOVA_05561	0.12	-1.6
1,078,193	+		BACOVA_05561	0.12	+0.2
1,078,197	-		BACOVA_05561	0.12	-0.8
1,078,215	-		BACOVA_05561	0.14	-0.5
1,078,216	+		BACOVA_05561	0.14	-1.3
1,078,234	+		BACOVA_05561	0.15	-1.4
1,078,235	-		BACOVA_05561	0.15	-0.2
1,078,259	+		BACOVA_05561	0.18	-0.2
1,078,259	+		BACOVA_05561	0.18	+0.1
1,078,260	-		BACOVA_05561	0.18	-1.2
1,078,260	-		BACOVA_05561	0.18	+0.2
1,078,365	-		BACOVA_05561	0.27	-0.1
1,078,380	-		BACOVA_05561	0.29	+0.0
1,078,380	-		BACOVA_05561	0.29	+0.7
1,078,383	-		BACOVA_05561	0.29	-0.2
1,078,384	+		BACOVA_05561	0.29	-1.5
1,078,384	+		BACOVA_05561	0.29	-2.1
1,078,384	+		BACOVA_05561	0.29	+0.1
1,078,394	+		BACOVA_05561	0.30	-0.7
1,078,395	-		BACOVA_05561	0.30	-2.3
1,078,395	-		BACOVA_05561	0.30	-0.3
1,078,424	+		BACOVA_05561	0.33	+0.0
1,078,424	+		BACOVA_05561	0.33	-1.5
1,078,424	+		BACOVA_05561	0.33	-1.1
1,078,425	-		BACOVA_05561	0.33	-0.2
1,078,462	+		BACOVA_05561	0.36	+0.5
1,078,510	+		BACOVA_05561	0.40	-0.9
1,078,527	+		BACOVA_05561	0.42	+1.1
1,078,581	-		BACOVA_05561	0.47	+0.9
1,078,635	+		BACOVA_05561	0.52	+0.8
1,078,678	-		BACOVA_05561	0.56	+0.2
1,078,712	-		BACOVA_05561	0.59	+0.5
1,078,727	+		BACOVA_05561	0.60	+0.5
1,078,727	+		BACOVA_05561	0.60	+0.5
1,078,754	+		BACOVA_05561	0.63	+0.1
1,078,754	+		BACOVA_05561	0.63	+1.3
1,078,801	+		BACOVA_05561	0.67	-0.7
1,078,898	-		BACOVA_05561	0.76	-0.0
1,078,902	+		BACOVA_05561	0.76	-0.5
1,078,925	+		BACOVA_05561	0.78	+0.5
1,078,926	-		BACOVA_05561	0.78	+0.1
1,078,926	-		BACOVA_05561	0.78	-0.0
1,078,926	-		BACOVA_05561	0.78	-0.5
1,078,935	+		BACOVA_05561	0.79	+0.9
1,078,936	-		BACOVA_05561	0.79	+0.8
1,078,940	-		BACOVA_05561	0.80	+0.3
1,079,000	+		BACOVA_05561	0.85	-0.5
1,079,007	-		BACOVA_05561	0.86	-1.5