Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_05501

Experiment: Rhamnogalacturonan I from potato pectic fiber 2.5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhamnogalacturonan I from potato pectic fiber 2.5 mg/mL (C)
1,009,951	+		BACOVA_05498	0.52	+0.3
1,009,960	+		BACOVA_05498	0.53	+0.1
1,009,992	+		BACOVA_05498	0.57	-0.2
1,010,048	+		BACOVA_05498	0.64	-1.4
1,010,106	+		BACOVA_05498	0.72	-0.9
1,010,107	-		BACOVA_05498	0.72	+0.3
1,010,128	+		BACOVA_05498	0.75	+0.5
1,010,172	+		BACOVA_05498	0.80	-1.2
1,010,173	-		BACOVA_05498	0.80	+0.2
1,010,174	+		BACOVA_05498	0.80	+0.5
1,010,175	-		BACOVA_05498	0.81	+0.7
1,010,177	+		BACOVA_05498	0.81	+0.4
1,010,177	+		BACOVA_05498	0.81	+0.2
1,010,220	-		BACOVA_05498	0.86	-0.5
1,010,220	-		BACOVA_05498	0.86	-2.1
1,010,249	-				+0.6
1,010,252	-				-0.2
1,010,287	+				+0.0
1,010,287	+				-1.2
1,010,314	-				-3.0
1,010,319	+				-0.4
1,010,320	-				-0.4
1,010,387	-		BACOVA_05500	0.11	-0.0
1,010,453	-		BACOVA_05500	0.30	-2.2
1,010,483	+		BACOVA_05500	0.39	-1.6
1,010,484	-		BACOVA_05500	0.39	+0.3
1,010,525	-		BACOVA_05500	0.51	-0.0
1,010,527	-		BACOVA_05500	0.52	-0.8
1,010,558	-		BACOVA_05500	0.61	+0.5
1,010,565	-		BACOVA_05500	0.63	+0.1
1,010,565	-		BACOVA_05500	0.63	+1.3
1,010,565	-		BACOVA_05500	0.63	-0.0
1,010,573	+		BACOVA_05500	0.65	+0.4
1,010,574	-				-0.4
1,010,648	+				+0.2
1,010,649	-				-1.1
1,010,705	+		BACOVA_05499	0.81	-0.9
1,010,718	-		BACOVA_05499	0.89	-0.5
1,010,739	+				-0.0
1,010,754	-				-0.2
1,010,762	+				+0.4
1,010,762	+				-0.9
1,010,762	+				+0.0
1,010,762	+				-0.3
1,010,762	+				-0.5
1,010,762	+				+0.0
1,010,762	+				+0.1
1,010,763	-				-1.2
1,010,763	-				-0.9
1,010,763	-				-0.9
1,010,763	-				-0.9
1,010,775	+				-1.3
1,010,776	-				+0.8
1,010,795	+				+2.8
1,010,796	-				+0.1
1,010,797	+				-1.2
1,011,053	-		BACOVA_05501	0.34	-0.9
1,011,056	+		BACOVA_05501	0.35	-0.2
1,011,078	+		BACOVA_05501	0.40	-2.5
1,011,078	+		BACOVA_05501	0.40	-0.7
1,011,149	+		BACOVA_05501	0.58	-0.3
1,011,149	+		BACOVA_05501	0.58	+1.3
1,011,150	-		BACOVA_05501	0.58	-0.9
1,011,285	+				-0.3
1,011,346	-				+0.5
1,011,427	+				-0.4
1,011,429	+				+0.4
1,011,433	-				+1.1
1,011,445	+				-0.6
1,011,445	+				-0.5
1,011,531	-				+0.6
1,011,645	+				-0.1
1,011,645	+				+0.4
1,011,646	-				+0.6
1,011,682	-				+1.4
1,011,684	-				+0.4
1,011,684	-				+0.6
1,011,684	-				-0.0
1,011,684	-				+0.8
1,011,690	-				+0.0
1,011,738	+				+0.9
1,011,766	-		BACOVA_05502	0.11	-2.1
1,011,767	+		BACOVA_05502	0.11	-1.0
1,011,767	+		BACOVA_05502	0.11	+0.3
1,011,767	+		BACOVA_05502	0.11	-0.2
1,011,767	+		BACOVA_05502	0.11	+0.8
1,011,819	-		BACOVA_05502	0.18	+0.2
1,011,829	-		BACOVA_05502	0.20	-1.6
1,012,024	+		BACOVA_05502	0.46	+0.4
1,012,132	-		BACOVA_05502	0.61	-0.7
1,012,155	-		BACOVA_05502	0.64	-0.4
1,012,212	+		BACOVA_05502	0.72	-0.1
1,012,299	-		BACOVA_05502	0.83	-0.5
1,012,301	-		BACOVA_05502	0.84	-1.9