Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_05494

Experiment: Rhamnogalacturonan I from potato pectic fiber 2.5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhamnogalacturonan I from potato pectic fiber 2.5 mg/mL (C)
1,006,470	-		BACOVA_05495	0.72	+0.5
1,006,471	+		BACOVA_05495	0.72	-3.5
1,006,493	-		BACOVA_05495	0.73	-0.9
1,006,511	+		BACOVA_05495	0.74	+1.1
1,006,514	+		BACOVA_05495	0.74	-1.0
1,006,515	-		BACOVA_05495	0.74	-1.5
1,006,515	-		BACOVA_05495	0.74	-0.7
1,006,515	-		BACOVA_05495	0.74	+0.8
1,006,515	-		BACOVA_05495	0.74	-2.8
1,006,533	+		BACOVA_05495	0.74	-1.8
1,006,533	+		BACOVA_05495	0.74	-1.5
1,006,534	-		BACOVA_05495	0.74	-1.6
1,006,548	-		BACOVA_05495	0.75	-0.6
1,006,548	-		BACOVA_05495	0.75	+0.3
1,006,548	-		BACOVA_05495	0.75	-2.1
1,006,548	-		BACOVA_05495	0.75	-0.7
1,006,625	-		BACOVA_05495	0.77	-0.4
1,006,625	-		BACOVA_05495	0.77	-1.2
1,006,701	+		BACOVA_05495	0.79	-1.6
1,006,707	+		BACOVA_05495	0.79	-1.6
1,006,728	-		BACOVA_05495	0.80	-0.9
1,006,739	-		BACOVA_05495	0.80	+0.0
1,006,755	+		BACOVA_05495	0.81	-1.9
1,006,772	+		BACOVA_05495	0.81	-0.2
1,006,772	+		BACOVA_05495	0.81	-2.2
1,006,773	-		BACOVA_05495	0.81	-1.5
1,006,899	-		BACOVA_05495	0.85	-2.7
1,006,905	-		BACOVA_05495	0.85	+0.6
1,006,906	+		BACOVA_05495	0.85	-0.4
1,006,907	-		BACOVA_05495	0.85	-1.2
1,006,939	+		BACOVA_05495	0.86	-0.7
1,006,940	-		BACOVA_05495	0.86	-0.6
1,006,940	-		BACOVA_05495	0.86	+0.6
1,007,008	+		BACOVA_05495	0.88	-1.8
1,007,009	-		BACOVA_05495	0.88	-1.5
1,007,012	+		BACOVA_05495	0.88	+0.1
1,007,046	-		BACOVA_05495	0.89	-2.5
1,007,058	+		BACOVA_05495	0.89	-0.8
1,007,066	+		BACOVA_05495	0.89	-0.8
1,007,124	-				-0.3
1,007,124	-				-0.7
1,007,141	+				-1.7
1,007,158	-				-1.1
1,007,158	-				+0.3
1,007,162	-				-0.1
1,007,168	+				-2.1
1,007,177	+				-2.9
1,007,178	-				-0.6
1,007,188	+				-0.5
1,007,188	+				-1.5
1,007,192	+				-0.8
1,007,193	-				-0.5
1,007,193	-				-1.1
1,007,202	-				-1.8
1,007,204	+				-0.1
1,007,204	+				-0.7
1,007,204	+				-1.4
1,007,215	+				-1.0
1,007,249	-				-0.5
1,007,281	-				-1.0
1,007,313	-				-2.0
1,007,313	-				-0.8
1,007,339	-				-0.5
1,007,339	-				-2.2
1,007,393	+				-1.5
1,007,394	-				-0.2
1,007,398	+				-0.2
1,007,472	-		BACOVA_05494	0.35	-1.2
1,007,508	+		BACOVA_05494	0.54	-1.4
1,007,532	+		BACOVA_05494	0.67	-0.5
1,007,533	-		BACOVA_05494	0.68	-0.7
1,007,536	+		BACOVA_05494	0.69	-0.1
1,007,561	+		BACOVA_05494	0.83	-1.1
1,007,589	-				-0.5
1,007,599	+				-1.5
1,007,599	+				-0.7
1,007,604	+				-1.2
1,007,615	-				-0.7
1,007,670	-		BACOVA_05496	0.15	+0.1
1,007,672	+		BACOVA_05496	0.15	+0.4
1,007,723	+		BACOVA_05496	0.24	+0.9
1,007,724	-		BACOVA_05496	0.24	-0.1
1,007,735	+		BACOVA_05496	0.26	+0.9
1,007,736	-		BACOVA_05496	0.27	-0.2
1,007,736	-		BACOVA_05496	0.27	+0.0
1,007,837	+		BACOVA_05496	0.45	+0.2
1,007,841	+		BACOVA_05496	0.46	-0.3
1,007,841	+		BACOVA_05496	0.46	+1.0
1,007,842	-		BACOVA_05496	0.46	+0.0
1,007,842	-		BACOVA_05496	0.46	+0.2
1,007,842	-		BACOVA_05496	0.46	+1.1
1,007,857	+		BACOVA_05496	0.49	-1.0
1,007,947	+		BACOVA_05496	0.65	-0.2
1,007,951	+		BACOVA_05496	0.66	+0.8
1,007,951	+		BACOVA_05496	0.66	+0.0
1,007,951	+		BACOVA_05496	0.66	+0.9
1,007,951	+		BACOVA_05496	0.66	-0.0
1,007,957	+		BACOVA_05496	0.67	-1.7
1,007,957	+		BACOVA_05496	0.67	-0.1
1,007,957	+		BACOVA_05496	0.67	-0.5
1,007,960	-		BACOVA_05496	0.67	-0.5
1,007,969	+		BACOVA_05496	0.69	+1.2
1,007,969	+		BACOVA_05496	0.69	+0.6
1,007,974	+		BACOVA_05496	0.70	+0.3
1,007,974	+		BACOVA_05496	0.70	-0.3
1,007,974	+		BACOVA_05496	0.70	-0.1
1,007,974	+		BACOVA_05496	0.70	-0.8
1,007,976	+		BACOVA_05496	0.70	+1.1
1,008,007	-		BACOVA_05496	0.76	-0.5
1,008,045	-		BACOVA_05496	0.83	+0.1
1,008,087	-				-3.0
1,008,087	-				-0.3
1,008,101	+				-0.7
1,008,104	-				-1.6
1,008,118	-				+0.2
1,008,139	-				-0.4
1,008,139	-				-1.2
1,008,253	+				-1.3
1,008,301	+				-0.9
1,008,301	+				+0.9
1,008,302	-				-1.6
1,008,427	+		BACOVA_05497	0.14	-2.0
1,008,427	+		BACOVA_05497	0.14	-0.2
1,008,427	+		BACOVA_05497	0.14	-0.7
1,008,470	+		BACOVA_05497	0.17	+1.4
1,008,471	-		BACOVA_05497	0.18	+0.7
1,008,471	-		BACOVA_05497	0.18	-0.1
1,008,519	-		BACOVA_05497	0.22	-1.5
1,008,573	+		BACOVA_05497	0.26	-1.2