Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_04791

Experiment: Rhamnogalacturonan I from potato pectic fiber 2.5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhamnogalacturonan I from potato pectic fiber 2.5 mg/mL (C)
140,690	-		BACOVA_04789	0.43	-0.4
140,712	-		BACOVA_04789	0.45	-1.0
140,712	-		BACOVA_04789	0.45	-0.1
140,740	+		BACOVA_04789	0.47	+0.3
140,865	+		BACOVA_04789	0.58	+0.2
140,866	-		BACOVA_04789	0.58	-0.2
140,873	+		BACOVA_04789	0.59	+1.5
140,874	-		BACOVA_04789	0.59	-0.3
140,874	-		BACOVA_04789	0.59	+1.4
140,874	-		BACOVA_04789	0.59	+0.7
140,910	+		BACOVA_04789	0.62	-1.4
140,920	-		BACOVA_04789	0.63	+0.8
140,984	+		BACOVA_04789	0.68	-0.9
141,048	+		BACOVA_04789	0.74	-1.3
141,072	+		BACOVA_04789	0.76	-0.6
141,086	-		BACOVA_04789	0.77	+0.6
141,123	-		BACOVA_04789	0.80	+1.1
141,187	+		BACOVA_04789	0.86	+0.3
141,208	+		BACOVA_04789	0.88	+0.0
141,208	+		BACOVA_04789	0.88	-0.4
141,209	-		BACOVA_04789	0.88	-0.1
141,210	+		BACOVA_04789	0.88	-1.0
141,210	+		BACOVA_04789	0.88	-0.6
141,210	+		BACOVA_04789	0.88	-1.3
141,210	+		BACOVA_04789	0.88	-0.5
141,211	-		BACOVA_04789	0.88	+1.5
141,223	-		BACOVA_04789	0.89	-1.3
141,228	+		BACOVA_04789	0.90	+1.1
141,229	-		BACOVA_04789	0.90	+0.4
141,229	-		BACOVA_04789	0.90	-0.7
141,249	+				-2.0
141,249	+				-0.7
141,249	+				+1.9
141,250	-				-0.4
141,251	+				-0.9
141,254	-				-2.1
141,326	-				-0.5
141,335	-				-1.0
141,335	-				+0.5
141,379	+				+0.8
141,387	+				+0.8
141,388	-				-0.5
141,433	+				+0.1
141,434	-				-0.6
141,434	-				-0.4
141,434	-				+0.3
141,434	-				-1.6
141,487	+				+0.1
141,610	-		BACOVA_04790	0.62	-0.3
141,631	-		BACOVA_04790	0.73	+0.1
141,678	+				-0.1
141,678	+				-1.0
141,923	+				+0.8
141,943	+				-0.4
141,944	-				-1.0
141,944	-				-0.8
141,944	-				+0.6
141,944	-				-0.5
141,945	+				-0.7
141,945	+				+0.3
141,948	+				+1.1
141,967	-		BACOVA_04791	0.10	-0.5
142,030	+		BACOVA_04791	0.13	-1.2
142,030	+		BACOVA_04791	0.13	-1.3
142,030	+		BACOVA_04791	0.13	-0.1
142,030	+		BACOVA_04791	0.13	-0.6
142,031	-		BACOVA_04791	0.13	+0.0
142,031	-		BACOVA_04791	0.13	+0.4
142,131	+		BACOVA_04791	0.16	-0.5
142,222	-		BACOVA_04791	0.20	+0.3
142,276	+		BACOVA_04791	0.22	+1.6
142,276	+		BACOVA_04791	0.22	+1.8
142,277	-		BACOVA_04791	0.22	-2.2
142,277	-		BACOVA_04791	0.22	-0.2
142,278	+		BACOVA_04791	0.22	+1.0
142,278	+		BACOVA_04791	0.22	+1.1
142,415	-		BACOVA_04791	0.27	+0.2
142,558	-		BACOVA_04791	0.32	+0.5
142,585	+		BACOVA_04791	0.33	+1.4
142,617	+		BACOVA_04791	0.34	+0.5
142,718	-		BACOVA_04791	0.38	-0.0
142,734	-		BACOVA_04791	0.39	-0.6
142,787	+		BACOVA_04791	0.41	+0.0
142,787	+		BACOVA_04791	0.41	-1.7
142,788	-		BACOVA_04791	0.41	-0.3
142,821	+		BACOVA_04791	0.42	-0.8
142,823	+		BACOVA_04791	0.42	+0.2
142,824	-		BACOVA_04791	0.42	+0.4
142,885	-		BACOVA_04791	0.44	+0.4
142,912	+		BACOVA_04791	0.45	+0.5
142,912	+		BACOVA_04791	0.45	-0.7
142,914	+		BACOVA_04791	0.45	-2.0
142,914	+		BACOVA_04791	0.45	-0.2
143,039	+		BACOVA_04791	0.50	+1.0
143,039	+		BACOVA_04791	0.50	-0.2
143,039	+		BACOVA_04791	0.50	+0.8
143,040	-		BACOVA_04791	0.50	+0.5
143,040	-		BACOVA_04791	0.50	+0.0
143,041	+		BACOVA_04791	0.50	-0.6
143,042	-		BACOVA_04791	0.50	+0.5
143,048	+		BACOVA_04791	0.50	-0.0
143,048	+		BACOVA_04791	0.50	+0.3
143,050	+		BACOVA_04791	0.50	+0.9
143,050	+		BACOVA_04791	0.50	-0.7
143,050	+		BACOVA_04791	0.50	+0.5
143,059	+		BACOVA_04791	0.51	-0.3
143,059	+		BACOVA_04791	0.51	-1.7
143,073	+		BACOVA_04791	0.51	+1.5
143,127	+		BACOVA_04791	0.53	+0.2
143,127	+		BACOVA_04791	0.53	+0.1
143,127	+		BACOVA_04791	0.53	-0.7
143,127	+		BACOVA_04791	0.53	-0.8
143,127	+		BACOVA_04791	0.53	+1.0
143,130	-		BACOVA_04791	0.53	-1.3
143,130	-		BACOVA_04791	0.53	+0.2
143,169	+		BACOVA_04791	0.55	-0.8
143,169	+		BACOVA_04791	0.55	-1.1
143,208	+		BACOVA_04791	0.56	+0.3
143,209	-		BACOVA_04791	0.56	+0.8
143,209	-		BACOVA_04791	0.56	+0.4
143,210	+		BACOVA_04791	0.56	-0.5
143,232	-		BACOVA_04791	0.57	+0.1
143,242	+		BACOVA_04791	0.58	+1.1
143,255	+		BACOVA_04791	0.58	-0.7
143,255	+		BACOVA_04791	0.58	+0.4
143,255	+		BACOVA_04791	0.58	-0.5
143,256	-		BACOVA_04791	0.58	-0.3
143,290	-		BACOVA_04791	0.59	-0.3
143,290	-		BACOVA_04791	0.59	-0.5
143,300	+		BACOVA_04791	0.60	-0.4
143,301	-		BACOVA_04791	0.60	-1.7
143,305	-		BACOVA_04791	0.60	+0.6
143,305	-		BACOVA_04791	0.60	-1.2
143,424	+		BACOVA_04791	0.64	-1.3
143,427	+		BACOVA_04791	0.64	-0.9
143,428	-		BACOVA_04791	0.64	-0.9
143,429	+		BACOVA_04791	0.64	+0.5
143,429	+		BACOVA_04791	0.64	-0.3
143,466	+		BACOVA_04791	0.66	-2.6
143,470	+		BACOVA_04791	0.66	-2.3
143,471	-		BACOVA_04791	0.66	-0.0
143,471	-		BACOVA_04791	0.66	-0.0
143,471	-		BACOVA_04791	0.66	+0.4
143,471	-		BACOVA_04791	0.66	-1.3
143,471	-		BACOVA_04791	0.66	-2.3
143,485	+		BACOVA_04791	0.67	-0.9
143,485	+		BACOVA_04791	0.67	+0.1
143,486	-		BACOVA_04791	0.67	-0.3
143,600	+		BACOVA_04791	0.71	-1.3
143,601	-		BACOVA_04791	0.71	-0.9
143,601	-		BACOVA_04791	0.71	-0.1
143,636	+		BACOVA_04791	0.72	+1.6
143,636	+		BACOVA_04791	0.72	+0.6
143,637	-		BACOVA_04791	0.72	-0.8
143,677	+		BACOVA_04791	0.74	+0.2
143,678	-		BACOVA_04791	0.74	-0.1
143,683	+		BACOVA_04791	0.74	+0.1
143,688	+		BACOVA_04791	0.74	-1.7
143,721	+		BACOVA_04791	0.75	+0.4
143,739	-		BACOVA_04791	0.76	-0.0
143,739	-		BACOVA_04791	0.76	-0.7
143,791	-		BACOVA_04791	0.78	-1.5
143,795	+		BACOVA_04791	0.78	-0.8
143,796	-		BACOVA_04791	0.78	-1.3
143,801	-		BACOVA_04791	0.78	-0.7
143,822	+		BACOVA_04791	0.79	+0.1
143,832	+		BACOVA_04791	0.79	-1.0
143,833	-		BACOVA_04791	0.79	+0.4
143,874	+		BACOVA_04791	0.81	+0.1
143,874	+		BACOVA_04791	0.81	-1.1
143,874	+		BACOVA_04791	0.81	-0.2
143,874	+		BACOVA_04791	0.81	-0.5
143,874	+		BACOVA_04791	0.81	-0.9
143,875	-		BACOVA_04791	0.81	-0.6
143,875	-		BACOVA_04791	0.81	-1.1
143,875	-		BACOVA_04791	0.81	-0.7
143,875	-		BACOVA_04791	0.81	+0.5
143,875	-		BACOVA_04791	0.81	+0.3
143,885	+		BACOVA_04791	0.81	+0.2
143,886	-		BACOVA_04791	0.81	+0.0
143,890	+		BACOVA_04791	0.82	-0.0
143,909	-		BACOVA_04791	0.82	-0.0
143,964	+		BACOVA_04791	0.84	-0.9
143,977	+		BACOVA_04791	0.85	+0.1
143,978	-		BACOVA_04791	0.85	+1.3
143,981	+		BACOVA_04791	0.85	+0.0
143,988	+		BACOVA_04791	0.85	+1.8
143,988	+		BACOVA_04791	0.85	-0.8
143,989	-		BACOVA_04791	0.85	-0.4
143,997	+		BACOVA_04791	0.86	+0.1
143,997	+		BACOVA_04791	0.86	+0.9
143,998	-		BACOVA_04791	0.86	-0.4
144,021	-		BACOVA_04791	0.86	-0.3
144,073	-		BACOVA_04791	0.88	+0.3
144,096	+		BACOVA_04791	0.89	+0.0
144,097	-		BACOVA_04791	0.89	-0.0
144,125	+				-0.7
144,176	-				-0.3
144,236	+				-0.0
144,236	+				-0.6
144,237	-				+0.1
144,237	-				+0.1
144,237	-				+0.3
144,240	+				-0.1
144,257	+				-0.6
144,258	-				+0.4
144,282	+				-0.5
144,292	+				-2.6
144,294	+				-1.6
144,294	+				-2.0
144,295	-				+0.5
144,300	+				+0.1
144,301	-				+0.8
144,303	+				-0.2
144,304	-				+0.8
144,305	+				-0.5
144,358	-				+0.3
144,359	+				+0.1
144,360	-				+0.1
144,388	+				-1.1
144,389	-				-0.4
144,389	-				-0.8
144,389	-				-0.4
144,417	-				-0.5
144,417	-				+0.9
144,420	+				+1.5
144,421	-				-1.3
144,423	+				+0.4
144,424	-				+1.1
144,460	+				+0.4
144,461	-				-0.1
144,470	+				-0.5
144,470	+				-1.1
144,477	-				-0.5
144,480	+				-0.6
144,485	+				-1.9
144,521	-				+0.5
144,525	+				+1.1
144,526	-				-0.2
144,534	-				-0.5
144,546	+				+0.1
144,547	-				+0.3
144,562	+				-1.1
144,562	+				-0.3
144,563	-				+0.1
144,563	-				+0.7
144,564	+				+0.7
144,587	-				-0.9
144,625	+				+0.8
144,625	+				-0.5
144,625	+				-0.2
144,625	+				-0.3
144,625	+				+0.6
144,625	+				-1.4
144,626	-				-0.3
144,626	-				+1.3
144,626	-				-1.5
144,626	-				-0.8
144,629	+				-0.6
144,629	+				-0.5
144,629	+				+0.5
144,629	+				-0.3
144,629	+				-0.2
144,630	-				-1.3
144,630	-				-0.5
144,630	-				-1.1
144,631	+				+0.1
144,649	+				+0.1
144,649	+				+1.4
144,651	+				-0.0
144,651	+				-0.0
144,652	-				+1.4
144,652	-				-0.7
144,658	+				-0.3
144,658	+				-0.9
144,707	+		BACOVA_04792	0.14	-0.2
144,757	+		BACOVA_04792	0.18	-0.7
144,770	-		BACOVA_04792	0.19	-1.2
144,783	+		BACOVA_04792	0.20	-0.6
144,807	-		BACOVA_04792	0.22	+0.3
144,807	-		BACOVA_04792	0.22	+1.0
144,810	+		BACOVA_04792	0.22	-2.1
144,810	+		BACOVA_04792	0.22	-0.5
144,810	+		BACOVA_04792	0.22	+0.5
144,810	+		BACOVA_04792	0.22	-1.7
144,895	-		BACOVA_04792	0.29	-1.4
144,918	+		BACOVA_04792	0.30	+0.1
144,918	+		BACOVA_04792	0.30	+0.3
144,967	+		BACOVA_04792	0.34	+0.7
144,967	+		BACOVA_04792	0.34	+1.0
144,968	-		BACOVA_04792	0.34	+0.1
144,990	+		BACOVA_04792	0.36	+1.5
144,992	+		BACOVA_04792	0.36	+0.7
145,008	+		BACOVA_04792	0.38	+0.8
145,009	-		BACOVA_04792	0.38	-0.5
145,074	+		BACOVA_04792	0.43	-0.6
145,085	-		BACOVA_04792	0.44	+1.5
145,123	+		BACOVA_04792	0.47	+0.5
145,123	+		BACOVA_04792	0.47	-0.1
145,124	-		BACOVA_04792	0.47	-0.3
145,124	-		BACOVA_04792	0.47	-1.0
145,147	-		BACOVA_04792	0.49	+0.1
145,300	+		BACOVA_04792	0.61	+0.9
145,301	-		BACOVA_04792	0.61	+0.5
145,304	+		BACOVA_04792	0.61	-0.2
145,304	+		BACOVA_04792	0.61	-0.8
145,304	+		BACOVA_04792	0.61	+0.0
145,304	+		BACOVA_04792	0.61	-0.0
145,305	-		BACOVA_04792	0.61	-1.1
145,305	-		BACOVA_04792	0.61	+1.5
145,306	+		BACOVA_04792	0.61	-0.0
145,306	+		BACOVA_04792	0.61	-0.5
145,306	+		BACOVA_04792	0.61	-0.3
145,306	+		BACOVA_04792	0.61	-0.2
145,306	+		BACOVA_04792	0.61	-0.5
145,307	-		BACOVA_04792	0.61	-0.3
145,307	-		BACOVA_04792	0.61	+0.3
145,307	-		BACOVA_04792	0.61	+0.8
145,308	+		BACOVA_04792	0.61	-1.2
145,308	+		BACOVA_04792	0.61	-0.9
145,308	+		BACOVA_04792	0.61	-0.8
145,308	+		BACOVA_04792	0.61	-1.2
145,309	-		BACOVA_04792	0.61	-1.5
145,309	-		BACOVA_04792	0.61	-0.7
145,309	-		BACOVA_04792	0.61	-1.5
145,325	-		BACOVA_04792	0.63	-1.2
145,355	-		BACOVA_04792	0.65	-0.0
145,368	+		BACOVA_04792	0.66	-0.5
145,374	+		BACOVA_04792	0.67	+1.6