Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_02237

Experiment: Rhamnogalacturonan I from potato pectic fiber 2.5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhamnogalacturonan I from potato pectic fiber 2.5 mg/mL (C)
15,561	-				-0.9
15,569	-				-4.5
15,569	-				-0.9
15,578	-				-0.4
15,617	-				-0.1
15,617	-				-0.9
15,617	-				-3.3
15,644	+				+1.5
15,644	+				-0.9
15,880	-		BACOVA_02236	0.32	-1.2
15,889	-		BACOVA_02236	0.33	-1.4
15,907	+		BACOVA_02236	0.34	-1.4
15,908	-		BACOVA_02236	0.35	-1.5
15,922	+		BACOVA_02236	0.36	-0.1
15,972	-		BACOVA_02236	0.41	-2.0
15,991	+		BACOVA_02236	0.43	-0.1
15,992	-		BACOVA_02236	0.43	-2.3
15,995	+		BACOVA_02236	0.44	-0.1
16,097	-		BACOVA_02236	0.54	-1.6
16,179	-		BACOVA_02236	0.63	-1.8
16,181	-		BACOVA_02236	0.63	-1.9
16,196	-		BACOVA_02236	0.65	-2.1
16,219	+		BACOVA_02236	0.67	-0.6
16,219	+		BACOVA_02236	0.67	-1.4
16,229	-		BACOVA_02236	0.68	-0.2
16,241	-		BACOVA_02236	0.69	-2.7
16,308	-		BACOVA_02236	0.77	-1.8
16,445	-				-1.6
16,445	-				-1.1
16,496	+				-0.5
16,530	-				-1.8
16,530	-				-2.5
16,530	-				-0.9
16,545	+				-2.1
16,555	+				-1.5
16,600	+				-1.6
16,723	-		BACOVA_02237	0.12	-1.1
16,730	-		BACOVA_02237	0.13	-1.5
16,807	+		BACOVA_02237	0.19	-1.4
16,840	+		BACOVA_02237	0.21	-2.6
16,987	+		BACOVA_02237	0.32	-1.8
17,116	-		BACOVA_02237	0.42	-1.5
17,177	-		BACOVA_02237	0.46	-2.3
17,180	-		BACOVA_02237	0.47	-1.3
17,207	-		BACOVA_02237	0.49	-0.6
17,329	+		BACOVA_02237	0.58	-1.5
17,330	-		BACOVA_02237	0.58	-0.7
17,330	-		BACOVA_02237	0.58	-1.9
17,525	-		BACOVA_02237	0.72	-1.2
17,587	+		BACOVA_02237	0.77	-0.4
17,709	-		BACOVA_02237	0.86	-2.8
17,777	-				-3.6
17,899	-				-2.5
17,918	+				-1.0
17,919	-				-2.1
17,955	-				-1.1
17,969	-				-3.1
17,969	-				-2.5
17,969	-				-2.6
17,969	-				-0.9
18,166	-		BACOVA_02238	0.27	-0.6
18,196	-		BACOVA_02238	0.30	-2.4
18,232	-		BACOVA_02238	0.34	-0.9
18,252	-		BACOVA_02238	0.36	-1.1
18,394	-		BACOVA_02238	0.50	-2.6
18,410	-		BACOVA_02238	0.51	-2.5
18,524	-		BACOVA_02238	0.63	+0.7
18,525	+		BACOVA_02238	0.63	-0.6
18,525	+		BACOVA_02238	0.63	-1.9
18,526	-		BACOVA_02238	0.63	-2.1
18,526	-		BACOVA_02238	0.63	-2.9
18,556	-		BACOVA_02238	0.66	-2.1
18,556	-		BACOVA_02238	0.66	+0.4
18,695	-		BACOVA_02238	0.80	-1.2
18,695	-		BACOVA_02238	0.80	-1.8
18,734	-		BACOVA_02238	0.84	-1.8
18,734	-		BACOVA_02238	0.84	-3.5
18,740	+		BACOVA_02238	0.85	-1.5
18,740	+		BACOVA_02238	0.85	+0.4
18,741	-		BACOVA_02238	0.85	-2.4
18,741	-		BACOVA_02238	0.85	-2.9
18,741	-		BACOVA_02238	0.85	-1.6
18,741	-		BACOVA_02238	0.85	-0.6
18,848	-				-2.1