Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_01552

Experiment: Rhamnogalacturonan I from potato pectic fiber 2.5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhamnogalacturonan I from potato pectic fiber 2.5 mg/mL (C)
50,687	+				-0.2
50,714	-				+1.5
50,714	-				+0.7
50,766	+				+0.2
50,766	+				+0.2
50,766	+				-0.6
50,767	-				+1.4
50,768	+				+0.9
50,769	-				+0.3
50,770	+				-1.1
50,799	+				+0.6
50,806	+				+0.1
50,806	+				-1.1
50,806	+				-1.0
50,808	+				-1.5
50,891	-		BACOVA_01550	0.17	-0.6
50,974	+		BACOVA_01550	0.32	+0.7
50,974	+		BACOVA_01550	0.32	-0.8
50,975	-		BACOVA_01550	0.32	+1.2
51,026	+		BACOVA_01550	0.41	-0.7
51,027	-		BACOVA_01550	0.41	+0.5
51,058	+		BACOVA_01550	0.46	+0.0
51,111	+		BACOVA_01550	0.56	-1.7
51,118	+		BACOVA_01550	0.57	+0.1
51,184	+		BACOVA_01550	0.69	+0.5
51,185	-		BACOVA_01550	0.69	-0.3
51,248	+		BACOVA_01550	0.80	+0.9
51,249	-		BACOVA_01550	0.80	+0.9
51,249	-		BACOVA_01550	0.80	-1.1
51,249	-		BACOVA_01550	0.80	+1.9
51,342	+				+1.0
51,349	-				+0.4
51,352	+				-0.2
51,370	+				+0.2
51,373	+				-0.4
51,377	+				+1.8
51,378	-				+1.1
51,544	-		BACOVA_01551	0.57	+0.9
51,545	+		BACOVA_01551	0.58	-0.8
51,546	-		BACOVA_01551	0.59	+1.6
51,547	+		BACOVA_01551	0.59	+1.5
51,568	-		BACOVA_01551	0.72	+2.2
51,663	+				-1.3
51,664	-				+0.0
51,693	+				+1.1
51,724	-		BACOVA_01552	0.10	+0.0
51,764	+		BACOVA_01552	0.15	+0.1
51,764	+		BACOVA_01552	0.15	+1.2
51,765	-		BACOVA_01552	0.15	+1.6
51,765	-		BACOVA_01552	0.15	+1.8
51,813	-		BACOVA_01552	0.20	+0.8
51,860	-		BACOVA_01552	0.25	-0.3
51,962	-		BACOVA_01552	0.36	+1.5
51,982	+		BACOVA_01552	0.38	-1.3
51,982	+		BACOVA_01552	0.38	+0.6
51,999	+		BACOVA_01552	0.40	-0.7
51,999	+		BACOVA_01552	0.40	+0.6
52,000	-		BACOVA_01552	0.40	+0.9
52,240	+		BACOVA_01552	0.67	+0.7
52,240	+		BACOVA_01552	0.67	-0.4
52,240	+		BACOVA_01552	0.67	+0.3
52,240	+		BACOVA_01552	0.67	-0.3
52,382	-		BACOVA_01552	0.82	+1.5
52,382	-		BACOVA_01552	0.82	+1.2
52,382	-		BACOVA_01552	0.82	+0.7
52,382	-		BACOVA_01552	0.82	+0.2
52,385	+		BACOVA_01552	0.83	+1.2
52,385	+		BACOVA_01552	0.83	-0.5
52,385	+		BACOVA_01552	0.83	+0.7
52,385	+		BACOVA_01552	0.83	+0.2
52,386	-		BACOVA_01552	0.83	+2.2
52,386	-		BACOVA_01552	0.83	-0.1
52,387	+		BACOVA_01552	0.83	+0.1
52,387	+		BACOVA_01552	0.83	+0.7
52,453	-				+0.9
52,453	-				+1.2
52,453	-				+0.2
52,503	+				-0.3
52,512	+				+0.8
52,520	+				+0.1
52,520	+				-0.1
52,526	+				-0.3
52,526	+				-0.5
52,536	-				+0.1
52,553	-				+0.1
52,574	-				+0.2
52,578	+				+0.4
52,582	+				+0.2
52,638	+				-0.5
52,661	-				+0.6
52,686	+				+1.2
52,754	-				-0.0
52,754	-				+0.6
52,799	+				+0.5
52,799	+				-0.9
52,800	-				-0.5
52,842	+				-2.0
52,843	-				+0.1
52,905	-		BACOVA_01553	0.13	+0.2
52,966	-		BACOVA_01553	0.18	+0.7
53,051	+		BACOVA_01553	0.24	-0.5
53,052	-		BACOVA_01553	0.24	-0.7
53,052	-		BACOVA_01553	0.24	-0.2
53,113	-		BACOVA_01553	0.29	-0.0
53,124	-		BACOVA_01553	0.29	-1.8
53,124	-		BACOVA_01553	0.29	+0.0
53,195	+		BACOVA_01553	0.35	-1.2
53,196	-		BACOVA_01553	0.35	-0.9
53,210	+		BACOVA_01553	0.36	+0.3
53,211	-		BACOVA_01553	0.36	-0.0
53,211	-		BACOVA_01553	0.36	-0.0
53,211	-		BACOVA_01553	0.36	+0.1
53,211	-		BACOVA_01553	0.36	+0.4
53,274	+		BACOVA_01553	0.41	+0.2
53,379	+		BACOVA_01553	0.49	-0.6
53,381	+		BACOVA_01553	0.49	+0.7
53,405	+		BACOVA_01553	0.51	+0.9
53,405	+		BACOVA_01553	0.51	-0.5
53,408	+		BACOVA_01553	0.51	-0.1
53,413	+		BACOVA_01553	0.51	-0.7
53,414	-		BACOVA_01553	0.51	+0.2
53,419	-		BACOVA_01553	0.52	-0.1
53,436	+		BACOVA_01553	0.53	+0.9
53,439	+		BACOVA_01553	0.53	+0.6
53,441	+		BACOVA_01553	0.53	+0.1
53,442	-		BACOVA_01553	0.53	-0.5