Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_03059 and MPMX26_03060 are separated by 57 nucleotides MPMX26_03060 and MPMX26_03061 are separated by 385 nucleotides
MPMX26_03059: MPMX26_03059 - 3-hydroxyadipyl-CoA dehydrogenase, at 3,182,860 to 3,184,377
_03059
MPMX26_03060: MPMX26_03060 - putative protein YjdJ, at 3,184,435 to 3,184,716
_03060
MPMX26_03061: MPMX26_03061 - Putative membrane-bound redox modulator Alx, at 3,185,102 to 3,186,058
_03061
Position (kb)
3184
3185 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3183.442 kb on + strand, within MPMX26_03059 at 3183.462 kb on + strand, within MPMX26_03059 at 3183.462 kb on + strand, within MPMX26_03059 at 3183.462 kb on + strand, within MPMX26_03059 at 3183.467 kb on + strand, within MPMX26_03059 at 3183.470 kb on - strand, within MPMX26_03059 at 3183.580 kb on - strand, within MPMX26_03059 at 3183.711 kb on + strand, within MPMX26_03059 at 3183.771 kb on + strand, within MPMX26_03059 at 3183.781 kb on + strand, within MPMX26_03059 at 3183.808 kb on + strand, within MPMX26_03059 at 3183.830 kb on + strand, within MPMX26_03059 at 3183.840 kb on + strand, within MPMX26_03059 at 3183.840 kb on + strand, within MPMX26_03059 at 3183.843 kb on + strand, within MPMX26_03059 at 3183.863 kb on + strand, within MPMX26_03059 at 3183.863 kb on + strand, within MPMX26_03059 at 3183.872 kb on + strand, within MPMX26_03059 at 3183.884 kb on + strand, within MPMX26_03059 at 3183.907 kb on + strand, within MPMX26_03059 at 3183.928 kb on + strand, within MPMX26_03059 at 3183.928 kb on + strand, within MPMX26_03059 at 3183.928 kb on + strand, within MPMX26_03059 at 3183.965 kb on + strand, within MPMX26_03059 at 3183.973 kb on - strand, within MPMX26_03059 at 3183.983 kb on - strand, within MPMX26_03059 at 3184.003 kb on + strand, within MPMX26_03059 at 3184.015 kb on + strand, within MPMX26_03059 at 3184.032 kb on + strand, within MPMX26_03059 at 3184.040 kb on + strand, within MPMX26_03059 at 3184.065 kb on + strand, within MPMX26_03059 at 3184.070 kb on + strand, within MPMX26_03059 at 3184.092 kb on + strand, within MPMX26_03059 at 3184.106 kb on + strand, within MPMX26_03059 at 3184.111 kb on + strand, within MPMX26_03059 at 3184.125 kb on + strand, within MPMX26_03059 at 3184.156 kb on + strand, within MPMX26_03059 at 3184.156 kb on + strand, within MPMX26_03059 at 3184.156 kb on + strand, within MPMX26_03059 at 3184.156 kb on + strand, within MPMX26_03059 at 3184.156 kb on + strand, within MPMX26_03059 at 3184.164 kb on + strand, within MPMX26_03059 at 3184.164 kb on - strand, within MPMX26_03059 at 3184.165 kb on + strand, within MPMX26_03059 at 3184.165 kb on + strand, within MPMX26_03059 at 3184.165 kb on + strand, within MPMX26_03059 at 3184.175 kb on + strand, within MPMX26_03059 at 3184.175 kb on + strand, within MPMX26_03059 at 3184.177 kb on + strand, within MPMX26_03059 at 3184.185 kb on + strand, within MPMX26_03059 at 3184.202 kb on + strand, within MPMX26_03059 at 3184.207 kb on + strand, within MPMX26_03059 at 3184.207 kb on + strand, within MPMX26_03059 at 3184.207 kb on + strand, within MPMX26_03059 at 3184.207 kb on + strand, within MPMX26_03059 at 3184.207 kb on + strand, within MPMX26_03059 at 3184.212 kb on + strand, within MPMX26_03059 at 3184.212 kb on + strand, within MPMX26_03059 at 3184.248 kb on + strand at 3184.322 kb on + strand at 3184.337 kb on + strand at 3184.362 kb on + strand at 3184.362 kb on + strand at 3184.367 kb on + strand at 3184.370 kb on - strand at 3184.389 kb on + strand at 3184.391 kb on + strand at 3184.418 kb on - strand at 3184.420 kb on + strand at 3184.474 kb on - strand, within MPMX26_03060 at 3184.476 kb on - strand, within MPMX26_03060 at 3184.493 kb on - strand, within MPMX26_03060 at 3184.498 kb on - strand, within MPMX26_03060 at 3184.503 kb on - strand, within MPMX26_03060 at 3184.513 kb on - strand, within MPMX26_03060 at 3184.515 kb on + strand, within MPMX26_03060 at 3184.549 kb on - strand, within MPMX26_03060 at 3184.549 kb on - strand, within MPMX26_03060 at 3184.551 kb on - strand, within MPMX26_03060 at 3184.551 kb on - strand, within MPMX26_03060 at 3184.582 kb on - strand, within MPMX26_03060 at 3184.586 kb on - strand, within MPMX26_03060 at 3184.586 kb on - strand, within MPMX26_03060 at 3184.602 kb on - strand, within MPMX26_03060 at 3184.602 kb on - strand, within MPMX26_03060 at 3184.602 kb on - strand, within MPMX26_03060 at 3184.674 kb on + strand, within MPMX26_03060 at 3184.726 kb on - strand at 3184.726 kb on - strand at 3184.735 kb on - strand at 3184.828 kb on + strand at 3184.828 kb on + strand at 3184.828 kb on + strand at 3184.838 kb on + strand at 3184.857 kb on + strand at 3184.884 kb on + strand at 3184.886 kb on + strand at 3184.887 kb on + strand at 3184.896 kb on + strand at 3184.896 kb on + strand at 3184.896 kb on + strand at 3184.896 kb on + strand at 3184.896 kb on + strand at 3184.896 kb on + strand at 3184.896 kb on + strand at 3184.896 kb on + strand at 3184.901 kb on + strand at 3184.925 kb on + strand at 3184.991 kb on + strand at 3184.991 kb on + strand at 3184.991 kb on + strand at 3184.991 kb on + strand at 3184.991 kb on + strand at 3184.998 kb on + strand at 3184.998 kb on + strand at 3185.002 kb on + strand at 3185.007 kb on + strand at 3185.007 kb on + strand at 3185.007 kb on + strand at 3185.007 kb on + strand at 3185.014 kb on + strand at 3185.058 kb on + strand at 3185.087 kb on + strand at 3185.118 kb on + strand at 3185.123 kb on + strand at 3185.191 kb on + strand at 3185.197 kb on + strand at 3185.197 kb on + strand at 3185.197 kb on + strand at 3185.197 kb on + strand at 3185.235 kb on + strand, within MPMX26_03061 at 3185.244 kb on + strand, within MPMX26_03061 at 3185.280 kb on + strand, within MPMX26_03061 at 3185.291 kb on + strand, within MPMX26_03061 at 3185.299 kb on - strand, within MPMX26_03061 at 3185.389 kb on - strand, within MPMX26_03061 at 3185.426 kb on + strand, within MPMX26_03061 at 3185.446 kb on + strand, within MPMX26_03061 at 3185.447 kb on - strand, within MPMX26_03061 at 3185.510 kb on + strand, within MPMX26_03061 at 3185.510 kb on + strand, within MPMX26_03061 at 3185.510 kb on + strand, within MPMX26_03061 at 3185.510 kb on + strand, within MPMX26_03061 at 3185.510 kb on + strand, within MPMX26_03061 at 3185.510 kb on + strand, within MPMX26_03061 at 3185.510 kb on + strand, within MPMX26_03061 at 3185.554 kb on + strand, within MPMX26_03061 at 3185.601 kb on + strand, within MPMX26_03061 at 3185.659 kb on + strand, within MPMX26_03061 at 3185.698 kb on + strand, within MPMX26_03061 at 3185.708 kb on + strand, within MPMX26_03061
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 3,183,442 + MPMX26_03059 0.38 -0.7 3,183,462 + MPMX26_03059 0.40 -0.4 3,183,462 + MPMX26_03059 0.40 +2.0 3,183,462 + MPMX26_03059 0.40 -0.2 3,183,467 + MPMX26_03059 0.40 +1.1 3,183,470 - MPMX26_03059 0.40 +0.7 3,183,580 - MPMX26_03059 0.47 -0.0 3,183,711 + MPMX26_03059 0.56 +0.7 3,183,771 + MPMX26_03059 0.60 -1.5 3,183,781 + MPMX26_03059 0.61 +0.8 3,183,808 + MPMX26_03059 0.62 -0.1 3,183,830 + MPMX26_03059 0.64 +0.8 3,183,840 + MPMX26_03059 0.65 -0.7 3,183,840 + MPMX26_03059 0.65 +0.6 3,183,843 + MPMX26_03059 0.65 +0.9 3,183,863 + MPMX26_03059 0.66 -0.7 3,183,863 + MPMX26_03059 0.66 +0.7 3,183,872 + MPMX26_03059 0.67 +0.4 3,183,884 + MPMX26_03059 0.67 +0.9 3,183,907 + MPMX26_03059 0.69 -0.9 3,183,928 + MPMX26_03059 0.70 +0.3 3,183,928 + MPMX26_03059 0.70 -1.3 3,183,928 + MPMX26_03059 0.70 +0.3 3,183,965 + MPMX26_03059 0.73 -0.6 3,183,973 - MPMX26_03059 0.73 +0.2 3,183,983 - MPMX26_03059 0.74 +2.1 3,184,003 + MPMX26_03059 0.75 -0.3 3,184,015 + MPMX26_03059 0.76 -0.1 3,184,032 + MPMX26_03059 0.77 -1.1 3,184,040 + MPMX26_03059 0.78 +0.1 3,184,065 + MPMX26_03059 0.79 -1.5 3,184,070 + MPMX26_03059 0.80 -0.6 3,184,092 + MPMX26_03059 0.81 -0.6 3,184,106 + MPMX26_03059 0.82 +1.1 3,184,111 + MPMX26_03059 0.82 -0.0 3,184,125 + MPMX26_03059 0.83 -1.0 3,184,156 + MPMX26_03059 0.85 -1.0 3,184,156 + MPMX26_03059 0.85 -1.0 3,184,156 + MPMX26_03059 0.85 -0.2 3,184,156 + MPMX26_03059 0.85 -0.6 3,184,156 + MPMX26_03059 0.85 -2.1 3,184,164 + MPMX26_03059 0.86 -0.7 3,184,164 - MPMX26_03059 0.86 +0.5 3,184,165 + MPMX26_03059 0.86 -1.3 3,184,165 + MPMX26_03059 0.86 +0.2 3,184,165 + MPMX26_03059 0.86 -1.1 3,184,175 + MPMX26_03059 0.87 -0.3 3,184,175 + MPMX26_03059 0.87 +1.0 3,184,177 + MPMX26_03059 0.87 +0.3 3,184,185 + MPMX26_03059 0.87 -0.5 3,184,202 + MPMX26_03059 0.88 -0.5 3,184,207 + MPMX26_03059 0.89 +0.4 3,184,207 + MPMX26_03059 0.89 -0.9 3,184,207 + MPMX26_03059 0.89 +1.1 3,184,207 + MPMX26_03059 0.89 -0.2 3,184,207 + MPMX26_03059 0.89 +0.1 3,184,212 + MPMX26_03059 0.89 -0.4 3,184,212 + MPMX26_03059 0.89 -2.2 3,184,248 + -1.1 3,184,322 + -0.1 3,184,337 + -1.9 3,184,362 + +0.6 3,184,362 + +0.9 3,184,367 + -0.4 3,184,370 - -1.7 3,184,389 + -0.7 3,184,391 + +1.1 3,184,418 - -0.3 3,184,420 + -1.7 3,184,474 - MPMX26_03060 0.14 +0.3 3,184,476 - MPMX26_03060 0.15 -0.0 3,184,493 - MPMX26_03060 0.21 +0.5 3,184,498 - MPMX26_03060 0.22 +0.1 3,184,503 - MPMX26_03060 0.24 -0.5 3,184,513 - MPMX26_03060 0.28 -0.1 3,184,515 + MPMX26_03060 0.28 -0.2 3,184,549 - MPMX26_03060 0.40 -0.4 3,184,549 - MPMX26_03060 0.40 -0.1 3,184,551 - MPMX26_03060 0.41 -0.5 3,184,551 - MPMX26_03060 0.41 +0.1 3,184,582 - MPMX26_03060 0.52 +0.0 3,184,586 - MPMX26_03060 0.54 +0.8 3,184,586 - MPMX26_03060 0.54 -1.8 3,184,602 - MPMX26_03060 0.59 +0.3 3,184,602 - MPMX26_03060 0.59 -1.0 3,184,602 - MPMX26_03060 0.59 +0.3 3,184,674 + MPMX26_03060 0.85 +0.8 3,184,726 - -2.2 3,184,726 - +0.4 3,184,735 - +0.9 3,184,828 + +0.1 3,184,828 + -0.4 3,184,828 + -0.7 3,184,838 + -0.7 3,184,857 + -0.4 3,184,884 + +0.2 3,184,886 + -0.2 3,184,887 + +0.2 3,184,896 + +0.2 3,184,896 + +0.0 3,184,896 + +0.2 3,184,896 + -0.4 3,184,896 + -0.0 3,184,896 + -0.4 3,184,896 + -0.4 3,184,896 + -0.4 3,184,901 + -1.3 3,184,925 + +0.3 3,184,991 + +1.0 3,184,991 + -0.4 3,184,991 + +0.3 3,184,991 + -0.0 3,184,991 + +0.1 3,184,998 + +0.2 3,184,998 + -0.4 3,185,002 + -0.3 3,185,007 + -0.1 3,185,007 + -1.3 3,185,007 + +0.2 3,185,007 + -0.6 3,185,014 + -0.4 3,185,058 + -0.3 3,185,087 + +1.1 3,185,118 + +1.5 3,185,123 + -1.2 3,185,191 + -1.6 3,185,197 + +0.0 3,185,197 + +1.2 3,185,197 + -0.2 3,185,197 + -1.7 3,185,235 + MPMX26_03061 0.14 +1.2 3,185,244 + MPMX26_03061 0.15 +1.2 3,185,280 + MPMX26_03061 0.19 -0.4 3,185,291 + MPMX26_03061 0.20 -1.3 3,185,299 - MPMX26_03061 0.21 -0.9 3,185,389 - MPMX26_03061 0.30 +0.8 3,185,426 + MPMX26_03061 0.34 +1.6 3,185,446 + MPMX26_03061 0.36 -0.3 3,185,447 - MPMX26_03061 0.36 +1.7 3,185,510 + MPMX26_03061 0.43 -0.7 3,185,510 + MPMX26_03061 0.43 +0.4 3,185,510 + MPMX26_03061 0.43 -0.1 3,185,510 + MPMX26_03061 0.43 +1.1 3,185,510 + MPMX26_03061 0.43 -0.2 3,185,510 + MPMX26_03061 0.43 -0.2 3,185,510 + MPMX26_03061 0.43 +0.4 3,185,554 + MPMX26_03061 0.47 +0.6 3,185,601 + MPMX26_03061 0.52 -1.1 3,185,659 + MPMX26_03061 0.58 -0.9 3,185,698 + MPMX26_03061 0.62 -0.1 3,185,708 + MPMX26_03061 0.63 -2.6
Or see this region's nucleotide sequence