Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_03023

Experiment: L-Serine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_03021 and MPMX26_03022 are separated by 23 nucleotidesMPMX26_03022 and MPMX26_03023 are separated by 89 nucleotidesMPMX26_03023 and MPMX26_03024 are separated by 8 nucleotides MPMX26_03021: MPMX26_03021 - Ribosomal RNA small subunit methyltransferase B, at 3,139,988 to 3,141,295 _03021 MPMX26_03022: MPMX26_03022 - Zinc transporter ZupT, at 3,141,319 to 3,142,128 _03022 MPMX26_03023: MPMX26_03023 - hypothetical protein, at 3,142,218 to 3,142,346 _03023 MPMX26_03024: MPMX26_03024 - hypothetical protein, at 3,142,355 to 3,143,833 _03024 Position (kb) 3142 3143Strain fitness (log2 ratio) -1 0 1 2 3at 3141.219 kb on + strandat 3141.324 kb on - strandat 3141.754 kb on + strand, within MPMX26_03022at 3141.999 kb on - strand, within MPMX26_03022at 3142.047 kb on - strand, within MPMX26_03022at 3142.049 kb on + strandat 3142.057 kb on - strandat 3142.203 kb on - strandat 3142.203 kb on - strandat 3142.233 kb on - strand, within MPMX26_03023at 3142.320 kb on - strand, within MPMX26_03023at 3142.349 kb on - strandat 3142.359 kb on - strandat 3142.359 kb on - strandat 3142.361 kb on - strandat 3142.361 kb on - strandat 3142.361 kb on - strandat 3142.377 kb on - strandat 3142.377 kb on - strandat 3142.387 kb on - strandat 3142.389 kb on - strandat 3142.396 kb on - strandat 3142.408 kb on - strandat 3142.410 kb on - strandat 3142.410 kb on - strandat 3142.443 kb on - strandat 3142.494 kb on - strandat 3142.502 kb on - strandat 3142.502 kb on - strandat 3142.515 kb on - strand, within MPMX26_03024at 3142.515 kb on - strand, within MPMX26_03024at 3142.555 kb on - strand, within MPMX26_03024at 3142.560 kb on - strand, within MPMX26_03024at 3142.613 kb on - strand, within MPMX26_03024at 3142.613 kb on - strand, within MPMX26_03024at 3142.613 kb on - strand, within MPMX26_03024at 3142.642 kb on - strand, within MPMX26_03024at 3142.691 kb on - strand, within MPMX26_03024at 3142.728 kb on - strand, within MPMX26_03024at 3142.789 kb on - strand, within MPMX26_03024at 3142.798 kb on - strand, within MPMX26_03024at 3142.824 kb on - strand, within MPMX26_03024at 3142.836 kb on - strand, within MPMX26_03024at 3142.853 kb on - strand, within MPMX26_03024at 3142.880 kb on - strand, within MPMX26_03024at 3142.880 kb on - strand, within MPMX26_03024at 3142.880 kb on - strand, within MPMX26_03024at 3142.890 kb on - strand, within MPMX26_03024at 3142.901 kb on - strand, within MPMX26_03024at 3142.957 kb on - strand, within MPMX26_03024at 3142.974 kb on - strand, within MPMX26_03024at 3142.978 kb on - strand, within MPMX26_03024at 3142.978 kb on - strand, within MPMX26_03024at 3142.997 kb on - strand, within MPMX26_03024at 3142.997 kb on - strand, within MPMX26_03024at 3143.002 kb on - strand, within MPMX26_03024at 3143.121 kb on - strand, within MPMX26_03024at 3143.174 kb on - strand, within MPMX26_03024at 3143.246 kb on - strand, within MPMX26_03024at 3143.246 kb on - strand, within MPMX26_03024at 3143.266 kb on - strand, within MPMX26_03024at 3143.297 kb on - strand, within MPMX26_03024at 3143.297 kb on - strand, within MPMX26_03024at 3143.309 kb on - strand, within MPMX26_03024at 3143.339 kb on - strand, within MPMX26_03024at 3143.339 kb on - strand, within MPMX26_03024at 3143.344 kb on - strand, within MPMX26_03024

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Serine (N)
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3,141,219 + -1.2
3,141,324 - +0.8
3,141,754 + MPMX26_03022 0.54 +1.4
3,141,999 - MPMX26_03022 0.84 +0.1
3,142,047 - MPMX26_03022 0.90 +0.6
3,142,049 + +0.4
3,142,057 - +0.7
3,142,203 - +0.6
3,142,203 - +0.2
3,142,233 - MPMX26_03023 0.12 +2.1
3,142,320 - MPMX26_03023 0.79 +1.8
3,142,349 - +1.6
3,142,359 - +0.9
3,142,359 - -0.5
3,142,361 - +1.4
3,142,361 - +2.1
3,142,361 - +0.2
3,142,377 - +1.4
3,142,377 - +2.2
3,142,387 - +2.4
3,142,389 - +2.0
3,142,396 - +2.0
3,142,408 - +1.8
3,142,410 - +2.7
3,142,410 - +3.1
3,142,443 - +0.5
3,142,494 - +1.9
3,142,502 - +2.5
3,142,502 - +1.8
3,142,515 - MPMX26_03024 0.11 +1.8
3,142,515 - MPMX26_03024 0.11 +1.6
3,142,555 - MPMX26_03024 0.14 +2.2
3,142,560 - MPMX26_03024 0.14 +1.5
3,142,613 - MPMX26_03024 0.17 +2.1
3,142,613 - MPMX26_03024 0.17 +2.1
3,142,613 - MPMX26_03024 0.17 +1.8
3,142,642 - MPMX26_03024 0.19 +2.0
3,142,691 - MPMX26_03024 0.23 +1.9
3,142,728 - MPMX26_03024 0.25 +0.6
3,142,789 - MPMX26_03024 0.29 +0.9
3,142,798 - MPMX26_03024 0.30 +2.6
3,142,824 - MPMX26_03024 0.32 +1.4
3,142,836 - MPMX26_03024 0.33 +1.7
3,142,853 - MPMX26_03024 0.34 +1.6
3,142,880 - MPMX26_03024 0.35 +2.0
3,142,880 - MPMX26_03024 0.35 +2.4
3,142,880 - MPMX26_03024 0.35 +1.1
3,142,890 - MPMX26_03024 0.36 +1.6
3,142,901 - MPMX26_03024 0.37 +1.9
3,142,957 - MPMX26_03024 0.41 +1.8
3,142,974 - MPMX26_03024 0.42 +1.4
3,142,978 - MPMX26_03024 0.42 +2.0
3,142,978 - MPMX26_03024 0.42 +1.5
3,142,997 - MPMX26_03024 0.43 +1.7
3,142,997 - MPMX26_03024 0.43 +1.7
3,143,002 - MPMX26_03024 0.44 +1.9
3,143,121 - MPMX26_03024 0.52 +2.1
3,143,174 - MPMX26_03024 0.55 +2.2
3,143,246 - MPMX26_03024 0.60 +1.5
3,143,246 - MPMX26_03024 0.60 +2.3
3,143,266 - MPMX26_03024 0.62 +1.8
3,143,297 - MPMX26_03024 0.64 +2.0
3,143,297 - MPMX26_03024 0.64 +2.3
3,143,309 - MPMX26_03024 0.65 +1.8
3,143,339 - MPMX26_03024 0.67 +1.1
3,143,339 - MPMX26_03024 0.67 +2.5
3,143,344 - MPMX26_03024 0.67 +2.0

Or see this region's nucleotide sequence