Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02896

Experiment: L-Serine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02895 and MPMX26_02896 are separated by 165 nucleotidesMPMX26_02896 and MPMX26_02897 are separated by 325 nucleotides MPMX26_02895: MPMX26_02895 - Glycine betaine transporter, at 3,000,323 to 3,002,290 _02895 MPMX26_02896: MPMX26_02896 - hypothetical protein, at 3,002,456 to 3,003,172 _02896 MPMX26_02897: MPMX26_02897 - hypothetical protein, at 3,003,498 to 3,004,538 _02897 Position (kb) 3002 3003 3004Strain fitness (log2 ratio) -1 0 1at 3001.535 kb on - strand, within MPMX26_02895at 3001.535 kb on - strand, within MPMX26_02895at 3001.535 kb on - strand, within MPMX26_02895at 3001.535 kb on - strand, within MPMX26_02895at 3001.535 kb on - strand, within MPMX26_02895at 3001.535 kb on - strand, within MPMX26_02895at 3001.535 kb on - strand, within MPMX26_02895at 3001.535 kb on - strand, within MPMX26_02895at 3001.535 kb on - strand, within MPMX26_02895at 3001.535 kb on - strand, within MPMX26_02895at 3001.535 kb on - strand, within MPMX26_02895at 3001.535 kb on - strand, within MPMX26_02895at 3001.539 kb on - strand, within MPMX26_02895at 3001.561 kb on - strand, within MPMX26_02895at 3001.612 kb on - strand, within MPMX26_02895at 3001.622 kb on - strand, within MPMX26_02895at 3001.646 kb on - strand, within MPMX26_02895at 3001.646 kb on - strand, within MPMX26_02895at 3001.656 kb on - strand, within MPMX26_02895at 3001.686 kb on - strand, within MPMX26_02895at 3001.763 kb on - strand, within MPMX26_02895at 3001.763 kb on - strand, within MPMX26_02895at 3001.765 kb on - strand, within MPMX26_02895at 3001.765 kb on - strand, within MPMX26_02895at 3001.765 kb on - strand, within MPMX26_02895at 3001.765 kb on - strand, within MPMX26_02895at 3001.765 kb on - strand, within MPMX26_02895at 3001.765 kb on - strand, within MPMX26_02895at 3001.828 kb on - strand, within MPMX26_02895at 3001.828 kb on - strand, within MPMX26_02895at 3001.828 kb on - strand, within MPMX26_02895at 3001.828 kb on - strand, within MPMX26_02895at 3001.828 kb on - strand, within MPMX26_02895at 3001.837 kb on - strand, within MPMX26_02895at 3001.847 kb on - strand, within MPMX26_02895at 3001.888 kb on - strand, within MPMX26_02895at 3001.910 kb on - strand, within MPMX26_02895at 3001.910 kb on - strand, within MPMX26_02895at 3001.956 kb on - strand, within MPMX26_02895at 3001.966 kb on - strand, within MPMX26_02895at 3001.972 kb on - strand, within MPMX26_02895at 3001.984 kb on - strand, within MPMX26_02895at 3001.989 kb on - strand, within MPMX26_02895at 3001.994 kb on - strand, within MPMX26_02895at 3001.994 kb on - strand, within MPMX26_02895at 3002.021 kb on - strand, within MPMX26_02895at 3002.021 kb on - strand, within MPMX26_02895at 3002.026 kb on - strand, within MPMX26_02895at 3002.026 kb on - strand, within MPMX26_02895at 3002.026 kb on - strand, within MPMX26_02895at 3002.026 kb on - strand, within MPMX26_02895at 3002.026 kb on - strand, within MPMX26_02895at 3002.041 kb on - strand, within MPMX26_02895at 3002.041 kb on - strand, within MPMX26_02895at 3002.057 kb on - strand, within MPMX26_02895at 3002.072 kb on - strand, within MPMX26_02895at 3002.072 kb on - strand, within MPMX26_02895at 3002.072 kb on - strand, within MPMX26_02895at 3002.082 kb on - strand, within MPMX26_02895at 3002.082 kb on - strand, within MPMX26_02895at 3002.083 kb on - strand, within MPMX26_02895at 3002.083 kb on - strand, within MPMX26_02895at 3002.084 kb on - strand, within MPMX26_02895at 3002.245 kb on - strandat 3002.294 kb on - strandat 3002.394 kb on - strandat 3002.488 kb on - strandat 3002.617 kb on - strand, within MPMX26_02896at 3002.665 kb on - strand, within MPMX26_02896at 3002.761 kb on - strand, within MPMX26_02896at 3002.761 kb on - strand, within MPMX26_02896at 3002.761 kb on - strand, within MPMX26_02896at 3002.827 kb on - strand, within MPMX26_02896at 3002.848 kb on - strand, within MPMX26_02896at 3002.879 kb on - strand, within MPMX26_02896at 3003.554 kb on + strandat 3003.720 kb on + strand, within MPMX26_02897at 3003.728 kb on - strand, within MPMX26_02897at 3003.998 kb on + strand, within MPMX26_02897

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Serine (N)
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3,001,535 - MPMX26_02895 0.62 -0.1
3,001,535 - MPMX26_02895 0.62 -0.2
3,001,535 - MPMX26_02895 0.62 +0.8
3,001,535 - MPMX26_02895 0.62 -0.4
3,001,535 - MPMX26_02895 0.62 +0.4
3,001,535 - MPMX26_02895 0.62 -0.4
3,001,535 - MPMX26_02895 0.62 -0.4
3,001,535 - MPMX26_02895 0.62 -0.0
3,001,535 - MPMX26_02895 0.62 -0.3
3,001,535 - MPMX26_02895 0.62 -0.2
3,001,535 - MPMX26_02895 0.62 +0.2
3,001,535 - MPMX26_02895 0.62 -1.1
3,001,539 - MPMX26_02895 0.62 +0.2
3,001,561 - MPMX26_02895 0.63 -0.8
3,001,612 - MPMX26_02895 0.65 +1.0
3,001,622 - MPMX26_02895 0.66 -0.0
3,001,646 - MPMX26_02895 0.67 +0.6
3,001,646 - MPMX26_02895 0.67 +0.3
3,001,656 - MPMX26_02895 0.68 +1.1
3,001,686 - MPMX26_02895 0.69 -0.5
3,001,763 - MPMX26_02895 0.73 +0.6
3,001,763 - MPMX26_02895 0.73 -0.5
3,001,765 - MPMX26_02895 0.73 -0.1
3,001,765 - MPMX26_02895 0.73 +0.2
3,001,765 - MPMX26_02895 0.73 +0.3
3,001,765 - MPMX26_02895 0.73 +1.3
3,001,765 - MPMX26_02895 0.73 +0.1
3,001,765 - MPMX26_02895 0.73 -0.2
3,001,828 - MPMX26_02895 0.76 -0.3
3,001,828 - MPMX26_02895 0.76 +0.1
3,001,828 - MPMX26_02895 0.76 -0.2
3,001,828 - MPMX26_02895 0.76 +0.4
3,001,828 - MPMX26_02895 0.76 -0.2
3,001,837 - MPMX26_02895 0.77 -1.5
3,001,847 - MPMX26_02895 0.77 -0.6
3,001,888 - MPMX26_02895 0.80 -1.0
3,001,910 - MPMX26_02895 0.81 -0.6
3,001,910 - MPMX26_02895 0.81 +0.3
3,001,956 - MPMX26_02895 0.83 +1.0
3,001,966 - MPMX26_02895 0.83 -0.1
3,001,972 - MPMX26_02895 0.84 +1.4
3,001,984 - MPMX26_02895 0.84 +1.0
3,001,989 - MPMX26_02895 0.85 -1.0
3,001,994 - MPMX26_02895 0.85 -0.2
3,001,994 - MPMX26_02895 0.85 -0.3
3,002,021 - MPMX26_02895 0.86 -0.3
3,002,021 - MPMX26_02895 0.86 +0.0
3,002,026 - MPMX26_02895 0.87 -0.2
3,002,026 - MPMX26_02895 0.87 -0.4
3,002,026 - MPMX26_02895 0.87 -0.3
3,002,026 - MPMX26_02895 0.87 -0.2
3,002,026 - MPMX26_02895 0.87 -0.5
3,002,041 - MPMX26_02895 0.87 +0.5
3,002,041 - MPMX26_02895 0.87 -0.9
3,002,057 - MPMX26_02895 0.88 -1.4
3,002,072 - MPMX26_02895 0.89 +0.9
3,002,072 - MPMX26_02895 0.89 +0.1
3,002,072 - MPMX26_02895 0.89 -0.1
3,002,082 - MPMX26_02895 0.89 +0.8
3,002,082 - MPMX26_02895 0.89 -0.4
3,002,083 - MPMX26_02895 0.89 -0.9
3,002,083 - MPMX26_02895 0.89 -0.0
3,002,084 - MPMX26_02895 0.89 -0.5
3,002,245 - +0.1
3,002,294 - -0.9
3,002,394 - -0.1
3,002,488 - +1.5
3,002,617 - MPMX26_02896 0.22 +0.7
3,002,665 - MPMX26_02896 0.29 +1.4
3,002,761 - MPMX26_02896 0.43 +0.3
3,002,761 - MPMX26_02896 0.43 +0.2
3,002,761 - MPMX26_02896 0.43 -1.2
3,002,827 - MPMX26_02896 0.52 -0.5
3,002,848 - MPMX26_02896 0.55 -1.1
3,002,879 - MPMX26_02896 0.59 -0.6
3,003,554 + +0.1
3,003,720 + MPMX26_02897 0.21 +0.5
3,003,728 - MPMX26_02897 0.22 -1.1
3,003,998 + MPMX26_02897 0.48 +0.2

Or see this region's nucleotide sequence