Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02442 and MPMX26_02443 are separated by 154 nucleotides MPMX26_02443 and MPMX26_02444 are separated by 73 nucleotides MPMX26_02444 and MPMX26_02445 are separated by 97 nucleotides MPMX26_02445 and MPMX26_02446 are separated by 94 nucleotides
MPMX26_02442: MPMX26_02442 - Malonyl CoA-acyl carrier protein transacylase, at 2,527,267 to 2,528,253
_02442
MPMX26_02443: MPMX26_02443 - 50S ribosomal protein L32, at 2,528,408 to 2,528,593
_02443
MPMX26_02444: MPMX26_02444 - Large ribosomal RNA subunit accumulation protein YceD, at 2,528,667 to 2,529,224
_02444
MPMX26_02445: MPMX26_02445 - hypothetical protein, at 2,529,322 to 2,529,984
_02445
MPMX26_02446: MPMX26_02446 - putative protein YciO, at 2,530,079 to 2,530,696
_02446
Position (kb)
2528
2529
2530 Strain fitness (log2 ratio)
-1
0
1
2 at 2528.744 kb on - strand, within MPMX26_02444 at 2529.298 kb on - strand at 2529.298 kb on - strand at 2529.317 kb on - strand at 2529.317 kb on - strand at 2529.327 kb on - strand at 2529.350 kb on - strand at 2529.386 kb on - strand at 2529.386 kb on - strand at 2529.401 kb on - strand, within MPMX26_02445 at 2529.420 kb on - strand, within MPMX26_02445 at 2529.438 kb on + strand, within MPMX26_02445 at 2529.441 kb on - strand, within MPMX26_02445 at 2529.443 kb on + strand, within MPMX26_02445 at 2529.446 kb on - strand, within MPMX26_02445 at 2529.446 kb on - strand, within MPMX26_02445 at 2529.498 kb on + strand, within MPMX26_02445 at 2529.498 kb on + strand, within MPMX26_02445 at 2529.498 kb on + strand, within MPMX26_02445 at 2529.498 kb on + strand, within MPMX26_02445 at 2529.513 kb on + strand, within MPMX26_02445 at 2529.555 kb on + strand, within MPMX26_02445 at 2529.570 kb on + strand, within MPMX26_02445 at 2529.666 kb on - strand, within MPMX26_02445 at 2529.671 kb on + strand, within MPMX26_02445 at 2529.684 kb on - strand, within MPMX26_02445 at 2529.700 kb on + strand, within MPMX26_02445 at 2529.720 kb on + strand, within MPMX26_02445 at 2529.720 kb on + strand, within MPMX26_02445 at 2529.720 kb on + strand, within MPMX26_02445 at 2529.720 kb on + strand, within MPMX26_02445 at 2529.740 kb on + strand, within MPMX26_02445 at 2529.841 kb on + strand, within MPMX26_02445 at 2529.847 kb on + strand, within MPMX26_02445 at 2529.847 kb on + strand, within MPMX26_02445 at 2529.853 kb on + strand, within MPMX26_02445 at 2529.916 kb on + strand, within MPMX26_02445 at 2530.092 kb on + strand at 2530.120 kb on + strand at 2530.120 kb on + strand at 2530.158 kb on + strand, within MPMX26_02446 at 2530.165 kb on + strand, within MPMX26_02446 at 2530.165 kb on + strand, within MPMX26_02446 at 2530.165 kb on + strand, within MPMX26_02446 at 2530.165 kb on + strand, within MPMX26_02446 at 2530.165 kb on + strand, within MPMX26_02446 at 2530.168 kb on + strand, within MPMX26_02446 at 2530.170 kb on + strand, within MPMX26_02446
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 2,528,744 - MPMX26_02444 0.14 +0.2 2,529,298 - +1.4 2,529,298 - +1.6 2,529,317 - +1.0 2,529,317 - +0.5 2,529,327 - +2.3 2,529,350 - +1.2 2,529,386 - +2.1 2,529,386 - -1.7 2,529,401 - MPMX26_02445 0.12 +0.4 2,529,420 - MPMX26_02445 0.15 +1.2 2,529,438 + MPMX26_02445 0.17 +1.5 2,529,441 - MPMX26_02445 0.18 +2.0 2,529,443 + MPMX26_02445 0.18 +1.8 2,529,446 - MPMX26_02445 0.19 +0.9 2,529,446 - MPMX26_02445 0.19 +0.4 2,529,498 + MPMX26_02445 0.27 -0.3 2,529,498 + MPMX26_02445 0.27 -1.3 2,529,498 + MPMX26_02445 0.27 +0.3 2,529,498 + MPMX26_02445 0.27 +0.0 2,529,513 + MPMX26_02445 0.29 +0.3 2,529,555 + MPMX26_02445 0.35 +0.4 2,529,570 + MPMX26_02445 0.37 +1.4 2,529,666 - MPMX26_02445 0.52 +0.5 2,529,671 + MPMX26_02445 0.53 +0.2 2,529,684 - MPMX26_02445 0.55 +0.4 2,529,700 + MPMX26_02445 0.57 +0.4 2,529,720 + MPMX26_02445 0.60 +0.5 2,529,720 + MPMX26_02445 0.60 +0.3 2,529,720 + MPMX26_02445 0.60 +0.4 2,529,720 + MPMX26_02445 0.60 -0.6 2,529,740 + MPMX26_02445 0.63 -1.1 2,529,841 + MPMX26_02445 0.78 +0.1 2,529,847 + MPMX26_02445 0.79 -0.8 2,529,847 + MPMX26_02445 0.79 +0.8 2,529,853 + MPMX26_02445 0.80 -0.1 2,529,916 + MPMX26_02445 0.90 +0.5 2,530,092 + +0.6 2,530,120 + +0.8 2,530,120 + +0.2 2,530,158 + MPMX26_02446 0.13 +0.9 2,530,165 + MPMX26_02446 0.14 +0.3 2,530,165 + MPMX26_02446 0.14 +0.7 2,530,165 + MPMX26_02446 0.14 +0.1 2,530,165 + MPMX26_02446 0.14 +0.2 2,530,165 + MPMX26_02446 0.14 +0.4 2,530,168 + MPMX26_02446 0.14 +0.5 2,530,170 + MPMX26_02446 0.15 +0.0
Or see this region's nucleotide sequence