Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02444

Experiment: L-Serine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02442 and MPMX26_02443 are separated by 154 nucleotidesMPMX26_02443 and MPMX26_02444 are separated by 73 nucleotidesMPMX26_02444 and MPMX26_02445 are separated by 97 nucleotidesMPMX26_02445 and MPMX26_02446 are separated by 94 nucleotides MPMX26_02442: MPMX26_02442 - Malonyl CoA-acyl carrier protein transacylase, at 2,527,267 to 2,528,253 _02442 MPMX26_02443: MPMX26_02443 - 50S ribosomal protein L32, at 2,528,408 to 2,528,593 _02443 MPMX26_02444: MPMX26_02444 - Large ribosomal RNA subunit accumulation protein YceD, at 2,528,667 to 2,529,224 _02444 MPMX26_02445: MPMX26_02445 - hypothetical protein, at 2,529,322 to 2,529,984 _02445 MPMX26_02446: MPMX26_02446 - putative protein YciO, at 2,530,079 to 2,530,696 _02446 Position (kb) 2528 2529 2530Strain fitness (log2 ratio) -1 0 1 2at 2528.744 kb on - strand, within MPMX26_02444at 2529.298 kb on - strandat 2529.298 kb on - strandat 2529.317 kb on - strandat 2529.317 kb on - strandat 2529.327 kb on - strandat 2529.350 kb on - strandat 2529.386 kb on - strandat 2529.386 kb on - strandat 2529.401 kb on - strand, within MPMX26_02445at 2529.420 kb on - strand, within MPMX26_02445at 2529.438 kb on + strand, within MPMX26_02445at 2529.441 kb on - strand, within MPMX26_02445at 2529.443 kb on + strand, within MPMX26_02445at 2529.446 kb on - strand, within MPMX26_02445at 2529.446 kb on - strand, within MPMX26_02445at 2529.498 kb on + strand, within MPMX26_02445at 2529.498 kb on + strand, within MPMX26_02445at 2529.498 kb on + strand, within MPMX26_02445at 2529.498 kb on + strand, within MPMX26_02445at 2529.513 kb on + strand, within MPMX26_02445at 2529.555 kb on + strand, within MPMX26_02445at 2529.570 kb on + strand, within MPMX26_02445at 2529.666 kb on - strand, within MPMX26_02445at 2529.671 kb on + strand, within MPMX26_02445at 2529.684 kb on - strand, within MPMX26_02445at 2529.700 kb on + strand, within MPMX26_02445at 2529.720 kb on + strand, within MPMX26_02445at 2529.720 kb on + strand, within MPMX26_02445at 2529.720 kb on + strand, within MPMX26_02445at 2529.720 kb on + strand, within MPMX26_02445at 2529.740 kb on + strand, within MPMX26_02445at 2529.841 kb on + strand, within MPMX26_02445at 2529.847 kb on + strand, within MPMX26_02445at 2529.847 kb on + strand, within MPMX26_02445at 2529.853 kb on + strand, within MPMX26_02445at 2529.916 kb on + strand, within MPMX26_02445at 2530.092 kb on + strandat 2530.120 kb on + strandat 2530.120 kb on + strandat 2530.158 kb on + strand, within MPMX26_02446at 2530.165 kb on + strand, within MPMX26_02446at 2530.165 kb on + strand, within MPMX26_02446at 2530.165 kb on + strand, within MPMX26_02446at 2530.165 kb on + strand, within MPMX26_02446at 2530.165 kb on + strand, within MPMX26_02446at 2530.168 kb on + strand, within MPMX26_02446at 2530.170 kb on + strand, within MPMX26_02446

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Serine (N)
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2,528,744 - MPMX26_02444 0.14 +0.2
2,529,298 - +1.4
2,529,298 - +1.6
2,529,317 - +1.0
2,529,317 - +0.5
2,529,327 - +2.3
2,529,350 - +1.2
2,529,386 - +2.1
2,529,386 - -1.7
2,529,401 - MPMX26_02445 0.12 +0.4
2,529,420 - MPMX26_02445 0.15 +1.2
2,529,438 + MPMX26_02445 0.17 +1.5
2,529,441 - MPMX26_02445 0.18 +2.0
2,529,443 + MPMX26_02445 0.18 +1.8
2,529,446 - MPMX26_02445 0.19 +0.9
2,529,446 - MPMX26_02445 0.19 +0.4
2,529,498 + MPMX26_02445 0.27 -0.3
2,529,498 + MPMX26_02445 0.27 -1.3
2,529,498 + MPMX26_02445 0.27 +0.3
2,529,498 + MPMX26_02445 0.27 +0.0
2,529,513 + MPMX26_02445 0.29 +0.3
2,529,555 + MPMX26_02445 0.35 +0.4
2,529,570 + MPMX26_02445 0.37 +1.4
2,529,666 - MPMX26_02445 0.52 +0.5
2,529,671 + MPMX26_02445 0.53 +0.2
2,529,684 - MPMX26_02445 0.55 +0.4
2,529,700 + MPMX26_02445 0.57 +0.4
2,529,720 + MPMX26_02445 0.60 +0.5
2,529,720 + MPMX26_02445 0.60 +0.3
2,529,720 + MPMX26_02445 0.60 +0.4
2,529,720 + MPMX26_02445 0.60 -0.6
2,529,740 + MPMX26_02445 0.63 -1.1
2,529,841 + MPMX26_02445 0.78 +0.1
2,529,847 + MPMX26_02445 0.79 -0.8
2,529,847 + MPMX26_02445 0.79 +0.8
2,529,853 + MPMX26_02445 0.80 -0.1
2,529,916 + MPMX26_02445 0.90 +0.5
2,530,092 + +0.6
2,530,120 + +0.8
2,530,120 + +0.2
2,530,158 + MPMX26_02446 0.13 +0.9
2,530,165 + MPMX26_02446 0.14 +0.3
2,530,165 + MPMX26_02446 0.14 +0.7
2,530,165 + MPMX26_02446 0.14 +0.1
2,530,165 + MPMX26_02446 0.14 +0.2
2,530,165 + MPMX26_02446 0.14 +0.4
2,530,168 + MPMX26_02446 0.14 +0.5
2,530,170 + MPMX26_02446 0.15 +0.0

Or see this region's nucleotide sequence