Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01688

Experiment: L-Serine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01687 and MPMX26_01688 are separated by 130 nucleotidesMPMX26_01688 and MPMX26_01689 are separated by 16 nucleotidesMPMX26_01689 and MPMX26_01690 are separated by 18 nucleotides MPMX26_01687: MPMX26_01687 - 2,4-dienoyl-CoA reductase, at 1,741,673 to 1,743,697 _01687 MPMX26_01688: MPMX26_01688 - hypothetical protein, at 1,743,828 to 1,744,361 _01688 MPMX26_01689: MPMX26_01689 - 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase, at 1,744,378 to 1,745,292 _01689 MPMX26_01690: MPMX26_01690 - HTH-type transcriptional regulator BenM, at 1,745,311 to 1,746,225 _01690 Position (kb) 1743 1744 1745Strain fitness (log2 ratio) -1 0 1 2at 1742.843 kb on - strand, within MPMX26_01687at 1743.258 kb on - strand, within MPMX26_01687at 1743.548 kb on - strandat 1743.832 kb on + strandat 1743.832 kb on + strandat 1743.832 kb on + strandat 1743.944 kb on + strand, within MPMX26_01688at 1743.968 kb on + strand, within MPMX26_01688at 1744.051 kb on + strand, within MPMX26_01688at 1744.051 kb on + strand, within MPMX26_01688at 1744.097 kb on + strand, within MPMX26_01688at 1744.097 kb on + strand, within MPMX26_01688at 1744.126 kb on + strand, within MPMX26_01688at 1744.155 kb on + strand, within MPMX26_01688at 1744.160 kb on + strand, within MPMX26_01688at 1744.245 kb on + strand, within MPMX26_01688at 1744.289 kb on + strand, within MPMX26_01688at 1744.292 kb on + strand, within MPMX26_01688at 1744.294 kb on + strand, within MPMX26_01688at 1744.294 kb on + strand, within MPMX26_01688at 1744.294 kb on + strand, within MPMX26_01688

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Serine (N)
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1,742,843 - MPMX26_01687 0.58 +0.8
1,743,258 - MPMX26_01687 0.78 +2.4
1,743,548 - -1.6
1,743,832 + -1.2
1,743,832 + -0.6
1,743,832 + -0.3
1,743,944 + MPMX26_01688 0.22 -0.8
1,743,968 + MPMX26_01688 0.26 -0.4
1,744,051 + MPMX26_01688 0.42 -0.1
1,744,051 + MPMX26_01688 0.42 -0.8
1,744,097 + MPMX26_01688 0.50 -0.5
1,744,097 + MPMX26_01688 0.50 -0.8
1,744,126 + MPMX26_01688 0.56 -0.1
1,744,155 + MPMX26_01688 0.61 -0.5
1,744,160 + MPMX26_01688 0.62 -0.9
1,744,245 + MPMX26_01688 0.78 -1.0
1,744,289 + MPMX26_01688 0.86 +0.7
1,744,292 + MPMX26_01688 0.87 -1.1
1,744,294 + MPMX26_01688 0.87 -0.0
1,744,294 + MPMX26_01688 0.87 -0.7
1,744,294 + MPMX26_01688 0.87 -0.2

Or see this region's nucleotide sequence