Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01687 and MPMX26_01688 are separated by 130 nucleotides MPMX26_01688 and MPMX26_01689 are separated by 16 nucleotides MPMX26_01689 and MPMX26_01690 are separated by 18 nucleotides
MPMX26_01687: MPMX26_01687 - 2,4-dienoyl-CoA reductase, at 1,741,673 to 1,743,697
_01687
MPMX26_01688: MPMX26_01688 - hypothetical protein, at 1,743,828 to 1,744,361
_01688
MPMX26_01689: MPMX26_01689 - 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase, at 1,744,378 to 1,745,292
_01689
MPMX26_01690: MPMX26_01690 - HTH-type transcriptional regulator BenM, at 1,745,311 to 1,746,225
_01690
Position (kb)
1743
1744
1745 Strain fitness (log2 ratio)
-1
0
1
2 at 1742.843 kb on - strand, within MPMX26_01687 at 1743.258 kb on - strand, within MPMX26_01687 at 1743.548 kb on - strand at 1743.832 kb on + strand at 1743.832 kb on + strand at 1743.832 kb on + strand at 1743.944 kb on + strand, within MPMX26_01688 at 1743.968 kb on + strand, within MPMX26_01688 at 1744.051 kb on + strand, within MPMX26_01688 at 1744.051 kb on + strand, within MPMX26_01688 at 1744.097 kb on + strand, within MPMX26_01688 at 1744.097 kb on + strand, within MPMX26_01688 at 1744.126 kb on + strand, within MPMX26_01688 at 1744.155 kb on + strand, within MPMX26_01688 at 1744.160 kb on + strand, within MPMX26_01688 at 1744.245 kb on + strand, within MPMX26_01688 at 1744.289 kb on + strand, within MPMX26_01688 at 1744.292 kb on + strand, within MPMX26_01688 at 1744.294 kb on + strand, within MPMX26_01688 at 1744.294 kb on + strand, within MPMX26_01688 at 1744.294 kb on + strand, within MPMX26_01688
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 1,742,843 - MPMX26_01687 0.58 +0.8 1,743,258 - MPMX26_01687 0.78 +2.4 1,743,548 - -1.6 1,743,832 + -1.2 1,743,832 + -0.6 1,743,832 + -0.3 1,743,944 + MPMX26_01688 0.22 -0.8 1,743,968 + MPMX26_01688 0.26 -0.4 1,744,051 + MPMX26_01688 0.42 -0.1 1,744,051 + MPMX26_01688 0.42 -0.8 1,744,097 + MPMX26_01688 0.50 -0.5 1,744,097 + MPMX26_01688 0.50 -0.8 1,744,126 + MPMX26_01688 0.56 -0.1 1,744,155 + MPMX26_01688 0.61 -0.5 1,744,160 + MPMX26_01688 0.62 -0.9 1,744,245 + MPMX26_01688 0.78 -1.0 1,744,289 + MPMX26_01688 0.86 +0.7 1,744,292 + MPMX26_01688 0.87 -1.1 1,744,294 + MPMX26_01688 0.87 -0.0 1,744,294 + MPMX26_01688 0.87 -0.7 1,744,294 + MPMX26_01688 0.87 -0.2
Or see this region's nucleotide sequence