Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01200 and MPMX26_01201 are separated by 709 nucleotides MPMX26_01201 and MPMX26_01202 are separated by 13 nucleotides MPMX26_01202 and MPMX26_01203 are separated by 387 nucleotides
MPMX26_01200: MPMX26_01200 - Sodium/glutamate symporter, at 1,274,413 to 1,275,639
_01200
MPMX26_01201: MPMX26_01201 - HTH-type transcriptional regulator MetR, at 1,276,349 to 1,277,266
_01201
MPMX26_01202: MPMX26_01202 - hypothetical protein, at 1,277,280 to 1,277,735
_01202
MPMX26_01203: MPMX26_01203 - Ribosomal small subunit pseudouridine synthase A, at 1,278,123 to 1,278,830
_01203
Position (kb)
1276
1277
1278 Strain fitness (log2 ratio)
-1
0
1 at 1276.391 kb on + strand at 1276.421 kb on + strand at 1276.422 kb on + strand at 1276.477 kb on + strand, within MPMX26_01201 at 1276.477 kb on + strand, within MPMX26_01201 at 1276.487 kb on + strand, within MPMX26_01201 at 1276.588 kb on + strand, within MPMX26_01201 at 1276.599 kb on + strand, within MPMX26_01201 at 1276.665 kb on + strand, within MPMX26_01201 at 1276.665 kb on + strand, within MPMX26_01201 at 1276.770 kb on + strand, within MPMX26_01201 at 1276.788 kb on + strand, within MPMX26_01201 at 1276.811 kb on + strand, within MPMX26_01201 at 1276.814 kb on + strand, within MPMX26_01201 at 1276.853 kb on + strand, within MPMX26_01201 at 1276.853 kb on + strand, within MPMX26_01201 at 1276.858 kb on + strand, within MPMX26_01201 at 1276.876 kb on + strand, within MPMX26_01201 at 1276.876 kb on + strand, within MPMX26_01201 at 1276.913 kb on + strand, within MPMX26_01201 at 1276.919 kb on + strand, within MPMX26_01201 at 1276.972 kb on + strand, within MPMX26_01201 at 1276.997 kb on + strand, within MPMX26_01201 at 1277.010 kb on + strand, within MPMX26_01201 at 1277.056 kb on + strand, within MPMX26_01201 at 1277.056 kb on + strand, within MPMX26_01201 at 1277.056 kb on + strand, within MPMX26_01201 at 1277.058 kb on + strand, within MPMX26_01201 at 1277.058 kb on + strand, within MPMX26_01201 at 1277.058 kb on + strand, within MPMX26_01201 at 1277.066 kb on + strand, within MPMX26_01201 at 1277.069 kb on + strand, within MPMX26_01201 at 1277.074 kb on + strand, within MPMX26_01201 at 1277.111 kb on + strand, within MPMX26_01201 at 1277.158 kb on + strand, within MPMX26_01201 at 1277.254 kb on + strand at 1277.739 kb on - strand at 1278.185 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 1,276,391 + -0.5 1,276,421 + -0.3 1,276,422 + +0.6 1,276,477 + MPMX26_01201 0.14 -0.2 1,276,477 + MPMX26_01201 0.14 -0.8 1,276,487 + MPMX26_01201 0.15 +0.5 1,276,588 + MPMX26_01201 0.26 -0.6 1,276,599 + MPMX26_01201 0.27 -0.1 1,276,665 + MPMX26_01201 0.34 -0.5 1,276,665 + MPMX26_01201 0.34 -0.4 1,276,770 + MPMX26_01201 0.46 -1.2 1,276,788 + MPMX26_01201 0.48 -0.5 1,276,811 + MPMX26_01201 0.50 +0.1 1,276,814 + MPMX26_01201 0.51 -0.0 1,276,853 + MPMX26_01201 0.55 +0.8 1,276,853 + MPMX26_01201 0.55 +0.1 1,276,858 + MPMX26_01201 0.55 -0.1 1,276,876 + MPMX26_01201 0.57 -0.6 1,276,876 + MPMX26_01201 0.57 -0.3 1,276,913 + MPMX26_01201 0.61 -0.4 1,276,919 + MPMX26_01201 0.62 -0.1 1,276,972 + MPMX26_01201 0.68 -0.2 1,276,997 + MPMX26_01201 0.71 +0.6 1,277,010 + MPMX26_01201 0.72 +1.2 1,277,056 + MPMX26_01201 0.77 +1.6 1,277,056 + MPMX26_01201 0.77 +1.3 1,277,056 + MPMX26_01201 0.77 -0.1 1,277,058 + MPMX26_01201 0.77 +0.5 1,277,058 + MPMX26_01201 0.77 +0.3 1,277,058 + MPMX26_01201 0.77 -0.7 1,277,066 + MPMX26_01201 0.78 -0.3 1,277,069 + MPMX26_01201 0.78 -0.5 1,277,074 + MPMX26_01201 0.79 +0.3 1,277,111 + MPMX26_01201 0.83 -0.2 1,277,158 + MPMX26_01201 0.88 -0.3 1,277,254 + +0.0 1,277,739 - +0.9 1,278,185 + -1.3
Or see this region's nucleotide sequence