Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01201

Experiment: L-Serine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01200 and MPMX26_01201 are separated by 709 nucleotidesMPMX26_01201 and MPMX26_01202 are separated by 13 nucleotidesMPMX26_01202 and MPMX26_01203 are separated by 387 nucleotides MPMX26_01200: MPMX26_01200 - Sodium/glutamate symporter, at 1,274,413 to 1,275,639 _01200 MPMX26_01201: MPMX26_01201 - HTH-type transcriptional regulator MetR, at 1,276,349 to 1,277,266 _01201 MPMX26_01202: MPMX26_01202 - hypothetical protein, at 1,277,280 to 1,277,735 _01202 MPMX26_01203: MPMX26_01203 - Ribosomal small subunit pseudouridine synthase A, at 1,278,123 to 1,278,830 _01203 Position (kb) 1276 1277 1278Strain fitness (log2 ratio) -1 0 1at 1276.391 kb on + strandat 1276.421 kb on + strandat 1276.422 kb on + strandat 1276.477 kb on + strand, within MPMX26_01201at 1276.477 kb on + strand, within MPMX26_01201at 1276.487 kb on + strand, within MPMX26_01201at 1276.588 kb on + strand, within MPMX26_01201at 1276.599 kb on + strand, within MPMX26_01201at 1276.665 kb on + strand, within MPMX26_01201at 1276.665 kb on + strand, within MPMX26_01201at 1276.770 kb on + strand, within MPMX26_01201at 1276.788 kb on + strand, within MPMX26_01201at 1276.811 kb on + strand, within MPMX26_01201at 1276.814 kb on + strand, within MPMX26_01201at 1276.853 kb on + strand, within MPMX26_01201at 1276.853 kb on + strand, within MPMX26_01201at 1276.858 kb on + strand, within MPMX26_01201at 1276.876 kb on + strand, within MPMX26_01201at 1276.876 kb on + strand, within MPMX26_01201at 1276.913 kb on + strand, within MPMX26_01201at 1276.919 kb on + strand, within MPMX26_01201at 1276.972 kb on + strand, within MPMX26_01201at 1276.997 kb on + strand, within MPMX26_01201at 1277.010 kb on + strand, within MPMX26_01201at 1277.056 kb on + strand, within MPMX26_01201at 1277.056 kb on + strand, within MPMX26_01201at 1277.056 kb on + strand, within MPMX26_01201at 1277.058 kb on + strand, within MPMX26_01201at 1277.058 kb on + strand, within MPMX26_01201at 1277.058 kb on + strand, within MPMX26_01201at 1277.066 kb on + strand, within MPMX26_01201at 1277.069 kb on + strand, within MPMX26_01201at 1277.074 kb on + strand, within MPMX26_01201at 1277.111 kb on + strand, within MPMX26_01201at 1277.158 kb on + strand, within MPMX26_01201at 1277.254 kb on + strandat 1277.739 kb on - strandat 1278.185 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Serine (N)
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1,276,391 + -0.5
1,276,421 + -0.3
1,276,422 + +0.6
1,276,477 + MPMX26_01201 0.14 -0.2
1,276,477 + MPMX26_01201 0.14 -0.8
1,276,487 + MPMX26_01201 0.15 +0.5
1,276,588 + MPMX26_01201 0.26 -0.6
1,276,599 + MPMX26_01201 0.27 -0.1
1,276,665 + MPMX26_01201 0.34 -0.5
1,276,665 + MPMX26_01201 0.34 -0.4
1,276,770 + MPMX26_01201 0.46 -1.2
1,276,788 + MPMX26_01201 0.48 -0.5
1,276,811 + MPMX26_01201 0.50 +0.1
1,276,814 + MPMX26_01201 0.51 -0.0
1,276,853 + MPMX26_01201 0.55 +0.8
1,276,853 + MPMX26_01201 0.55 +0.1
1,276,858 + MPMX26_01201 0.55 -0.1
1,276,876 + MPMX26_01201 0.57 -0.6
1,276,876 + MPMX26_01201 0.57 -0.3
1,276,913 + MPMX26_01201 0.61 -0.4
1,276,919 + MPMX26_01201 0.62 -0.1
1,276,972 + MPMX26_01201 0.68 -0.2
1,276,997 + MPMX26_01201 0.71 +0.6
1,277,010 + MPMX26_01201 0.72 +1.2
1,277,056 + MPMX26_01201 0.77 +1.6
1,277,056 + MPMX26_01201 0.77 +1.3
1,277,056 + MPMX26_01201 0.77 -0.1
1,277,058 + MPMX26_01201 0.77 +0.5
1,277,058 + MPMX26_01201 0.77 +0.3
1,277,058 + MPMX26_01201 0.77 -0.7
1,277,066 + MPMX26_01201 0.78 -0.3
1,277,069 + MPMX26_01201 0.78 -0.5
1,277,074 + MPMX26_01201 0.79 +0.3
1,277,111 + MPMX26_01201 0.83 -0.2
1,277,158 + MPMX26_01201 0.88 -0.3
1,277,254 + +0.0
1,277,739 - +0.9
1,278,185 + -1.3

Or see this region's nucleotide sequence