Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF600
Experiment: Ying_Others16 rep B; time point 2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ying_Others16 rep B; time point 2 |
---|---|---|---|---|---|
remove | |||||
274,978 | - | GFF600 | 0.18 | -0.4 | |
275,442 | + | -0.7 | |||
275,481 | + | -0.6 | |||
275,481 | + | -0.1 | |||
275,482 | - | +0.3 | |||
275,909 | + | GFF601 | 0.55 | -0.7 | |
275,909 | + | GFF601 | 0.55 | -0.3 | |
275,909 | + | GFF601 | 0.55 | +0.2 | |
275,909 | + | GFF601 | 0.55 | +0.4 | |
275,910 | - | GFF601 | 0.55 | -0.1 | |
275,910 | - | GFF601 | 0.55 | -0.3 | |
276,060 | - | GFF601 | 0.75 | -1.0 | |
276,309 | + | -0.5 |
Or see this region's nucleotide sequence