Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5732

Experiment: Ying_Others16 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 2
2,760,722	+		GFF5730	0.89	+0.2
2,760,722	+		GFF5730	0.89	-0.8
2,760,722	+		GFF5730	0.89	+0.1
2,760,722	+		GFF5730	0.89	-0.6
2,760,722	+		GFF5730	0.89	-0.2
2,760,722	+		GFF5730	0.89	-0.1
2,760,723	-		GFF5730	0.89	+0.4
2,760,723	-		GFF5730	0.89	+0.2
2,760,806	+				-0.3
2,760,806	+				+1.0
2,760,806	+				+0.9
2,760,807	-				+0.0
2,760,807	-				-0.3
2,760,807	-				-0.4
2,760,906	+				-0.3
2,760,906	+				+0.5
2,760,906	+				-0.4
2,760,906	+				+0.4
2,760,907	-				+0.2
2,760,907	-				-0.4
2,760,907	-				-0.0
2,761,017	-				-0.4
2,761,091	+		GFF5731	0.16	-0.6
2,761,091	+		GFF5731	0.16	-0.4
2,761,091	+		GFF5731	0.16	+0.3
2,761,091	+		GFF5731	0.16	-0.3
2,761,091	+		GFF5731	0.16	-0.0
2,761,091	+		GFF5731	0.16	-0.2
2,761,091	+		GFF5731	0.16	+0.0
2,761,092	-		GFF5731	0.16	-0.1
2,761,092	-		GFF5731	0.16	+0.2
2,761,092	-		GFF5731	0.16	-0.7
2,761,092	-		GFF5731	0.16	+0.1
2,761,160	+		GFF5731	0.28	+0.3
2,761,160	+		GFF5731	0.28	+0.7
2,761,161	-		GFF5731	0.28	-0.1
2,761,161	-		GFF5731	0.28	-0.3
2,761,161	-		GFF5731	0.28	-0.5
2,761,181	+		GFF5731	0.31	-1.1
2,761,181	+		GFF5731	0.31	+0.1
2,761,181	+		GFF5731	0.31	-0.2
2,761,181	+		GFF5731	0.31	+0.5
2,761,182	-		GFF5731	0.32	-0.7
2,761,182	-		GFF5731	0.32	-0.1
2,761,182	-		GFF5731	0.32	-0.1
2,761,182	-		GFF5731	0.32	+0.5
2,761,182	-		GFF5731	0.32	-0.5
2,761,250	+		GFF5731	0.43	-0.7
2,761,250	+		GFF5731	0.43	+0.7
2,761,250	+		GFF5731	0.43	-0.6
2,761,250	+		GFF5731	0.43	-0.7
2,761,251	-		GFF5731	0.43	-0.5
2,761,251	-		GFF5731	0.43	-0.2
2,761,839	+		GFF5732	0.14	-0.7
2,761,839	+		GFF5732	0.14	-1.2
2,761,839	+		GFF5732	0.14	+0.3
2,761,839	+		GFF5732	0.14	-2.2
2,761,840	-		GFF5732	0.14	-0.5
2,761,840	-		GFF5732	0.14	+0.1
2,761,840	-		GFF5732	0.14	-1.4
2,762,040	+		GFF5732	0.30	-1.0
2,762,040	+		GFF5732	0.30	+0.3
2,762,040	+		GFF5732	0.30	-0.1
2,762,258	+		GFF5732	0.47	+0.3
2,762,409	+		GFF5732	0.59	+0.4
2,762,517	+		GFF5732	0.68	+0.7
2,762,517	+		GFF5732	0.68	-0.0
2,762,517	+		GFF5732	0.68	-1.7
2,762,518	-		GFF5732	0.68	-1.5
2,762,766	+		GFF5732	0.87	-0.7
2,762,767	-		GFF5732	0.87	-0.7
2,762,820	+				-1.0
2,762,820	+				+0.3
2,762,859	+				+2.0
2,762,859	+				+0.1
2,762,871	+				+1.0
2,762,871	+				+0.5
2,762,871	+				+0.4
2,762,871	+				-0.7
2,762,871	+				-0.2
2,762,871	+				-1.0
2,762,871	+				+0.8
2,762,872	-				-0.6
2,762,872	-				+0.2
2,762,874	+				+0.7
2,762,874	+				-0.6
2,763,899	+		GFF5734	0.68	-2.2