Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5248

Experiment: Ying_Others16 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 2
2,262,549	+		GFF5246	0.62	+0.2
2,262,550	-		GFF5246	0.62	-0.0
2,262,884	+				+0.7
2,263,190	-				-1.0
2,263,367	+		GFF5248	0.15	-0.2
2,263,367	+		GFF5248	0.15	-1.1
2,263,367	+		GFF5248	0.15	+0.6
2,263,454	+		GFF5248	0.21	+0.1
2,263,508	+		GFF5248	0.25	-0.2
2,264,752	+		GFF5249	0.16	+0.2
2,264,752	+		GFF5249	0.16	+0.6
2,264,752	+		GFF5249	0.16	+1.0
2,264,753	-		GFF5249	0.16	-0.3
2,264,753	-		GFF5249	0.16	+1.1
2,264,990	-		GFF5249	0.34	+0.2
2,265,035	-		GFF5249	0.38	-0.2
2,265,035	-		GFF5249	0.38	+0.1
2,265,035	-		GFF5249	0.38	+0.0
2,265,035	-		GFF5249	0.38	+0.6
2,265,109	+		GFF5249	0.43	+0.0
2,265,206	-		GFF5249	0.51	+0.9
2,265,319	+		GFF5249	0.60	-1.4
2,265,319	+		GFF5249	0.60	-0.1
2,265,379	+		GFF5249	0.64	-0.4
2,265,380	-		GFF5249	0.64	+0.2
2,265,380	-		GFF5249	0.64	-0.4
2,265,380	-		GFF5249	0.64	-0.0