Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5237

Experiment: Ying_Others16 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 2
2,251,753	+		GFF5236	0.17	-0.1
2,251,765	+		GFF5236	0.18	-0.3
2,251,766	-		GFF5236	0.18	-0.5
2,252,561	+				-0.5
2,252,562	-				+0.4
2,252,562	-				-0.8
2,252,846	+		GFF5237	0.36	-0.4
2,252,846	+		GFF5237	0.36	-0.5
2,252,886	-		GFF5237	0.41	-0.6
2,252,969	+		GFF5237	0.50	-0.8
2,252,970	-		GFF5237	0.50	-0.6
2,253,002	+		GFF5237	0.53	-0.8
2,253,002	+		GFF5237	0.53	+0.2
2,253,002	+		GFF5237	0.53	+1.2
2,253,002	+		GFF5237	0.53	+0.2
2,253,003	-		GFF5237	0.53	-0.4
2,253,098	+		GFF5237	0.64	-0.6
2,253,098	+		GFF5237	0.64	-0.6
2,253,099	-		GFF5237	0.64	-1.2
2,253,099	-		GFF5237	0.64	-0.2
2,253,099	-		GFF5237	0.64	+0.6
2,253,099	-		GFF5237	0.64	+0.3
2,253,231	-		GFF5237	0.78	-0.3
2,253,324	-		GFF5237	0.88	-0.7
2,253,474	+				+0.1
2,253,475	-				-0.2
2,253,745	+		GFF5238	0.15	+0.2
2,253,745	+		GFF5238	0.15	+1.9
2,253,746	-		GFF5238	0.15	+0.1
2,253,746	-		GFF5238	0.15	-0.3
2,253,746	-		GFF5238	0.15	-0.0
2,253,746	-		GFF5238	0.15	-0.1
2,253,746	-		GFF5238	0.15	-0.8
2,254,040	-		GFF5238	0.40	-0.0
2,254,058	-		GFF5238	0.41	-0.1
2,254,058	-		GFF5238	0.41	-0.1
2,254,075	+		GFF5238	0.43	+0.3
2,254,075	+		GFF5238	0.43	+0.4
2,254,075	+		GFF5238	0.43	-0.3
2,254,075	+		GFF5238	0.43	+0.1
2,254,075	+		GFF5238	0.43	-0.2
2,254,075	+		GFF5238	0.43	-0.5
2,254,076	-		GFF5238	0.43	+0.1
2,254,076	-		GFF5238	0.43	-0.0
2,254,076	-		GFF5238	0.43	-0.2
2,254,076	-		GFF5238	0.43	+0.8
2,254,352	-		GFF5238	0.66	+0.8