Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4701

Experiment: Ying_Others16 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 2
1,652,577	+		GFF4700	0.56	+0.1
1,652,578	-		GFF4700	0.56	-0.0
1,653,138	+				-0.1
1,653,138	+				+0.7
1,653,138	+				-0.1
1,653,138	+				-0.2
1,653,138	+				+0.1
1,653,139	-				+0.8
1,653,139	-				-0.0
1,653,139	-				-0.1
1,653,163	+				+0.7
1,653,163	+				-0.0
1,653,168	+				-0.1
1,653,169	-				+0.1
1,653,418	+		GFF4701	0.14	-1.0
1,653,418	+		GFF4701	0.14	-0.2
1,653,418	+		GFF4701	0.14	-0.4
1,653,418	+		GFF4701	0.14	-1.8
1,653,419	-		GFF4701	0.14	-0.4
1,653,419	-		GFF4701	0.14	+0.6
1,653,419	-		GFF4701	0.14	+0.5
1,653,419	-		GFF4701	0.14	+0.4
1,653,419	-		GFF4701	0.14	+0.0
1,653,463	+		GFF4701	0.18	+0.4
1,653,463	+		GFF4701	0.18	-0.0
1,653,463	+		GFF4701	0.18	+0.7
1,653,463	+		GFF4701	0.18	-0.4
1,653,464	-		GFF4701	0.18	-0.1
1,653,464	-		GFF4701	0.18	-0.1
1,653,464	-		GFF4701	0.18	-0.7
1,653,464	-		GFF4701	0.18	-0.2
1,653,464	-		GFF4701	0.18	+0.1
1,653,464	-		GFF4701	0.18	+0.1
1,653,464	-		GFF4701	0.18	+0.4
1,653,464	-		GFF4701	0.18	+0.2
1,653,464	-		GFF4701	0.18	-0.1
1,653,464	-		GFF4701	0.18	-0.2
1,653,640	+		GFF4701	0.32	+1.1
1,653,641	-		GFF4701	0.32	-0.6
1,653,641	-		GFF4701	0.32	-0.1
1,653,641	-		GFF4701	0.32	+0.4
1,653,641	-		GFF4701	0.32	-0.2
1,653,641	-		GFF4701	0.32	+0.2
1,653,641	-		GFF4701	0.32	-1.4
1,653,753	+		GFF4701	0.41	-0.9
1,653,827	-		GFF4701	0.47	-0.2
1,653,925	+		GFF4701	0.55	-0.2
1,653,925	+		GFF4701	0.55	-0.2
1,653,926	-		GFF4701	0.55	-0.2
1,653,926	-		GFF4701	0.55	-0.1
1,653,926	-		GFF4701	0.55	-0.2
1,654,090	+		GFF4701	0.68	-0.4
1,654,090	+		GFF4701	0.68	+0.4
1,654,502	+				+0.6
1,654,607	+				-0.0
1,654,607	+				+0.2
1,654,607	+				-0.7
1,654,607	+				-0.1
1,654,607	+				+0.2
1,654,608	-				+0.0
1,654,608	-				-1.4
1,654,695	-		GFF4702	0.16	-0.1
1,654,766	+		GFF4702	0.22	-0.3
1,654,766	+		GFF4702	0.22	+0.7
1,654,766	+		GFF4702	0.22	-0.2
1,654,766	+		GFF4702	0.22	-0.1
1,654,767	-		GFF4702	0.22	+0.7
1,654,946	+		GFF4702	0.38	+0.4
1,654,946	+		GFF4702	0.38	+0.2
1,654,946	+		GFF4702	0.38	-0.2
1,654,946	+		GFF4702	0.38	-0.5
1,654,946	+		GFF4702	0.38	+0.2
1,654,947	-		GFF4702	0.38	+0.1
1,654,947	-		GFF4702	0.38	-1.6
1,654,947	-		GFF4702	0.38	-0.3
1,654,947	-		GFF4702	0.38	-0.2
1,654,947	-		GFF4702	0.38	-0.2
1,654,947	-		GFF4702	0.38	-0.3
1,654,947	-		GFF4702	0.38	+0.1
1,654,947	-		GFF4702	0.38	+0.6
1,654,947	-		GFF4702	0.38	-0.1
1,654,947	-		GFF4702	0.38	-0.1
1,655,112	-		GFF4702	0.52	+0.8
1,655,112	-		GFF4702	0.52	+0.1
1,655,112	-		GFF4702	0.52	+0.8
1,655,237	+		GFF4702	0.63	+0.1
1,655,237	+		GFF4702	0.63	+0.3
1,655,238	-		GFF4702	0.63	-0.4
1,655,238	-		GFF4702	0.63	-0.4
1,655,238	-		GFF4702	0.63	+0.2
1,655,238	-		GFF4702	0.63	-0.2