Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4664

Experiment: Ying_Others16 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 2
1,615,222	+		GFF4664	0.11	+0.1
1,615,222	+		GFF4664	0.11	+0.5
1,615,223	-		GFF4664	0.11	+0.1
1,615,223	-		GFF4664	0.11	+0.3
1,615,223	-		GFF4664	0.11	-0.1
1,615,223	-		GFF4664	0.11	-1.0
1,615,223	-		GFF4664	0.11	-0.8
1,615,223	-		GFF4664	0.11	+0.4
1,615,231	+		GFF4664	0.14	+0.3
1,615,231	+		GFF4664	0.14	+0.3
1,615,231	+		GFF4664	0.14	-0.3
1,615,231	+		GFF4664	0.14	+0.4
1,615,232	-		GFF4664	0.14	+0.0
1,615,232	-		GFF4664	0.14	+0.2
1,615,232	-		GFF4664	0.14	+0.1
1,615,232	-		GFF4664	0.14	+0.5
1,615,232	-		GFF4664	0.14	+0.1
1,615,232	-		GFF4664	0.14	+0.8
1,615,232	-		GFF4664	0.14	+0.4
1,615,259	+		GFF4664	0.22	-0.4
1,615,259	+		GFF4664	0.22	+0.8
1,615,259	+		GFF4664	0.22	-1.1
1,615,259	+		GFF4664	0.22	+0.6
1,615,259	+		GFF4664	0.22	+0.8
1,615,260	-		GFF4664	0.23	+0.3
1,615,260	-		GFF4664	0.23	+0.6
1,615,260	-		GFF4664	0.23	+0.7
1,615,260	-		GFF4664	0.23	+0.4
1,615,283	-		GFF4664	0.30	+1.4
1,615,303	+		GFF4664	0.36	-0.4
1,615,303	+		GFF4664	0.36	+0.4
1,615,303	+		GFF4664	0.36	+0.3
1,615,303	+		GFF4664	0.36	+0.5
1,615,304	-		GFF4664	0.36	+0.2
1,615,304	-		GFF4664	0.36	+0.6
1,615,304	-		GFF4664	0.36	-0.1
1,615,304	-		GFF4664	0.36	+0.1
1,615,304	-		GFF4664	0.36	-0.0
1,615,304	-		GFF4664	0.36	-0.2
1,615,729	+		GFF4665	0.17	-0.2
1,615,729	+		GFF4665	0.17	-0.6
1,615,730	-		GFF4665	0.17	-0.4
1,615,730	-		GFF4665	0.17	+0.8
1,615,876	+		GFF4665	0.35	-0.4
1,615,876	+		GFF4665	0.35	-0.4
1,615,877	-		GFF4665	0.35	-0.2
1,615,877	-		GFF4665	0.35	+0.4
1,615,879	+		GFF4665	0.35	-0.7
1,615,880	-		GFF4665	0.36	-0.1
1,616,200	+		GFF4665	0.75	-1.0
1,616,200	+		GFF4665	0.75	-0.8
1,616,200	+		GFF4665	0.75	-0.0
1,616,200	+		GFF4665	0.75	-0.6
1,616,200	+		GFF4665	0.75	-0.4
1,616,200	+		GFF4665	0.75	+0.5
1,616,200	+		GFF4665	0.75	-1.8
1,616,200	+		GFF4665	0.75	-0.5
1,616,200	+		GFF4665	0.75	-0.9
1,616,201	-		GFF4665	0.75	-0.8
1,616,201	-		GFF4665	0.75	-0.7
1,616,201	-		GFF4665	0.75	-0.1
1,616,201	-		GFF4665	0.75	-0.3
1,616,201	-		GFF4665	0.75	+0.0
1,616,201	-		GFF4665	0.75	+0.1
1,616,201	-		GFF4665	0.75	-0.4
1,616,201	-		GFF4665	0.75	-0.4
1,616,201	-		GFF4665	0.75	-0.3
1,616,201	-		GFF4665	0.75	-0.2
1,616,201	-		GFF4665	0.75	-0.5
1,616,201	-		GFF4665	0.75	-0.2
1,616,201	-		GFF4665	0.75	-0.4
1,616,243	-		GFF4665	0.80	-0.8
1,616,243	-		GFF4665	0.80	-0.1
1,616,287	+		GFF4665	0.86	-0.2
1,616,287	+		GFF4665	0.86	-0.5
1,616,287	+		GFF4665	0.86	-0.5
1,616,287	+		GFF4665	0.86	-0.3
1,616,287	+		GFF4665	0.86	+0.1
1,616,288	-		GFF4665	0.86	+0.2
1,616,288	-		GFF4665	0.86	-0.7
1,616,288	-		GFF4665	0.86	+0.8
1,616,288	-		GFF4665	0.86	-0.7
1,616,288	-		GFF4665	0.86	-0.5
1,616,427	-				+1.0