Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4539

Experiment: Ying_Others16 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 2
1,465,288	+		GFF4538	0.60	-0.4
1,465,288	+		GFF4538	0.60	-2.0
1,465,288	+		GFF4538	0.60	+0.2
1,465,289	-		GFF4538	0.60	-0.1
1,465,338	+		GFF4538	0.67	+0.5
1,465,477	-		GFF4538	0.84	-0.1
1,465,866	-				+0.5
1,465,876	+				-0.3
1,465,876	+				+0.5
1,465,876	+				-0.4
1,465,877	-				-0.2
1,465,877	-				-0.5
1,465,877	-				-0.2
1,465,884	+				-0.6
1,465,884	+				-0.7
1,465,885	-				-0.2
1,465,885	-				+0.0
1,465,885	-				-1.4
1,465,885	-				+0.8
1,465,896	+				-0.1
1,465,896	+				+0.3
1,465,896	+				+0.3
1,466,317	+		GFF4539	0.43	+0.3
1,466,317	+		GFF4539	0.43	+0.0
1,466,317	+		GFF4539	0.43	-0.1
1,466,317	+		GFF4539	0.43	-0.0
1,466,318	-		GFF4539	0.43	+0.3
1,466,318	-		GFF4539	0.43	+0.8
1,466,318	-		GFF4539	0.43	+0.3
1,466,318	-		GFF4539	0.43	-0.1
1,466,318	-		GFF4539	0.43	+0.5
1,466,531	-		GFF4539	0.63	+0.6
1,466,531	-		GFF4539	0.63	-0.8
1,466,656	+		GFF4539	0.75	+0.2
1,466,656	+		GFF4539	0.75	+0.5
1,466,656	+		GFF4539	0.75	+0.2
1,467,130	+		GFF4540	0.11	-0.5
1,467,131	-		GFF4540	0.11	+0.6
1,467,131	-		GFF4540	0.11	-0.3
1,467,190	+		GFF4540	0.18	-0.1
1,467,190	+		GFF4540	0.18	-0.5
1,467,191	-		GFF4540	0.18	-0.1
1,467,191	-		GFF4540	0.18	+0.2
1,467,511	+		GFF4540	0.51	-1.0
1,467,511	+		GFF4540	0.51	-0.4
1,467,511	+		GFF4540	0.51	+0.1
1,467,511	+		GFF4540	0.51	+0.1
1,467,512	-		GFF4540	0.51	-0.1
1,467,695	-		GFF4540	0.70	+0.3