Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4119

Experiment: Ying_Others16 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 2
1,029,441	+		GFF4118	0.25	-0.1
1,029,441	+		GFF4118	0.25	+0.3
1,029,442	-		GFF4118	0.26	+0.1
1,029,624	+		GFF4118	0.49	+0.3
1,029,624	+		GFF4118	0.49	-0.2
1,029,702	+		GFF4118	0.59	-2.1
1,029,703	-		GFF4118	0.59	+0.0
1,029,703	-		GFF4118	0.59	-0.5
1,029,864	+		GFF4118	0.79	-0.4
1,029,864	+		GFF4118	0.79	-1.2
1,029,865	-		GFF4118	0.80	-0.5
1,030,305	-		GFF4119	0.31	+3.2
1,030,305	-		GFF4119	0.31	-0.0
1,030,305	-		GFF4119	0.31	-0.2
1,030,872	-				-0.2
1,030,872	-				-0.6
1,031,618	+		GFF4120	0.69	-0.8
1,031,618	+		GFF4120	0.69	+0.3