Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3726

Experiment: Ying_Others16 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 2
621,175	+		GFF3725	0.75	+0.8
621,176	-		GFF3725	0.75	-0.2
621,176	-		GFF3725	0.75	+0.7
621,256	+		GFF3725	0.78	-0.2
621,298	+		GFF3725	0.79	-0.0
621,299	-		GFF3725	0.79	-0.7
621,299	-		GFF3725	0.79	-0.4
621,538	+		GFF3725	0.88	-1.2
621,538	+		GFF3725	0.88	-1.3
621,539	-		GFF3725	0.88	+1.0
621,625	-				-0.1
621,625	-				-0.3
622,249	+		GFF3726	0.67	+0.5
622,249	+		GFF3726	0.67	-0.8
622,250	-		GFF3726	0.68	+0.5
622,460	+				-0.9
622,461	+				+0.7
622,461	+				-0.6
622,461	+				-0.1
622,586	-				+0.8
622,789	+		GFF3727	0.25	-1.0
622,789	+		GFF3727	0.25	-0.7
622,789	+		GFF3727	0.25	-0.1
622,804	+		GFF3727	0.27	-0.5
622,846	+		GFF3727	0.32	-0.1
622,847	-		GFF3727	0.32	-2.5