Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3494

Experiment: Ying_Others16 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 2
373,174	-		GFF3493	0.64	+0.5
373,281	+		GFF3493	0.69	+0.9
373,282	-		GFF3493	0.69	-0.2
373,666	-		GFF3493	0.88	-0.2
373,987	+				-0.1
373,988	-				-0.4
374,247	+		GFF3494	0.31	+0.2
374,248	-		GFF3494	0.31	+1.1
374,362	-		GFF3494	0.44	+0.3
374,683	-		GFF3494	0.83	+1.2
375,345	+				+0.0
375,346	-				-1.3
375,497	+		GFF3495	0.23	+0.6
375,497	+		GFF3495	0.23	+0.4
375,498	-		GFF3495	0.23	+0.2
375,624	+		GFF3495	0.44	-0.3
375,624	+		GFF3495	0.44	-0.4
375,624	+		GFF3495	0.44	-0.8
375,624	+		GFF3495	0.44	+0.3
375,624	+		GFF3495	0.44	-0.5
375,625	-		GFF3495	0.44	-0.2
375,625	-		GFF3495	0.44	-0.4