Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3274

Experiment: Ying_Others16 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 2
157,924	+		GFF3273	0.56	-0.2
157,925	-		GFF3273	0.56	+1.1
158,332	+		GFF3273	0.76	-0.7
158,342	-		GFF3273	0.76	+1.0
158,729	-				+0.2
158,879	+		GFF3274	0.26	+0.7
158,922	-		GFF3274	0.45	+0.6
158,931	-		GFF3274	0.49	+0.3
158,931	-		GFF3274	0.49	+0.4
158,931	-		GFF3274	0.49	+0.7
158,978	+		GFF3274	0.70	+0.5
158,978	+		GFF3274	0.70	-0.6
158,979	-		GFF3274	0.71	+0.3
158,979	-		GFF3274	0.71	+0.4
158,979	-		GFF3274	0.71	+0.2
159,072	+				+0.1
159,073	-				+0.1
159,073	-				+0.3
159,076	+				+0.2
159,097	+				-0.1
159,098	-				+1.0
159,098	-				+0.4
159,592	+		GFF3275	0.31	-0.4
159,638	-		GFF3275	0.34	-0.9
159,739	+		GFF3275	0.42	-0.1
159,739	+		GFF3275	0.42	+0.4
159,740	-		GFF3275	0.42	-2.4
159,824	-		GFF3275	0.49	+0.4