Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3174

Experiment: Ying_Others16 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 2
50,958	-		GFF3173	0.50	-0.1
51,240	-		GFF3173	0.65	+0.2
51,240	-		GFF3173	0.65	+0.9
51,240	-		GFF3173	0.65	+0.6
51,597	-		GFF3173	0.84	-0.5
51,597	-		GFF3173	0.84	-0.5
51,597	-		GFF3173	0.84	+0.3
51,620	+		GFF3173	0.86	+0.3
51,727	+				-0.6
51,728	-				-0.3
51,728	-				-0.3
51,966	+		GFF3174	0.11	+0.3
52,033	-		GFF3174	0.21	+0.8
52,764	+				+0.5
52,818	+				+0.3
52,818	+				+0.1
52,819	-				+1.4