Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF1901

Experiment: Ying_Others16 rep B; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 2
766,448	-		GFF1901	0.48	-0.4
766,481	-		GFF1901	0.52	-0.1
766,481	-		GFF1901	0.52	+0.1
766,768	+		GFF1901	0.79	+0.4
766,769	-		GFF1901	0.79	+0.6
766,769	-		GFF1901	0.79	+1.3
766,769	-		GFF1901	0.79	+0.8
767,133	+				-0.1
767,232	+				+0.3
767,232	+				+0.1
767,233	-				-0.2
767,233	-				-0.2
767,346	+		GFF1902	0.11	-1.9
767,346	+		GFF1902	0.11	-0.6
767,346	+		GFF1902	0.11	-0.1
767,346	+		GFF1902	0.11	-0.0
767,347	-		GFF1902	0.11	-0.4
767,347	-		GFF1902	0.11	-0.1
767,433	+		GFF1902	0.14	-0.8
767,433	+		GFF1902	0.14	-1.1
767,434	-		GFF1902	0.14	+0.4
767,514	+		GFF1902	0.16	+0.4
767,514	+		GFF1902	0.16	+0.4
767,515	-		GFF1902	0.16	+0.6
767,515	-		GFF1902	0.16	-0.5
767,758	-		GFF1902	0.24	+0.1