Strain Fitness in Escherichia fergusonii Becca around EFB2_04556

Experiment: phage mixed community; hk phage cocktail 1 MOI; 14 member community plus Klebsiella pneumoniae

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	phage mixed community; hk phage cocktail 1 MOI; 14 member community plus Klebsiella pneumoniae
4,785,812	+		EFB2_04554	0.55	+0.0
4,785,813	-		EFB2_04554	0.55	-0.9
4,785,813	-		EFB2_04554	0.55	+0.8
4,785,835	-		EFB2_04554	0.58	-1.2
4,785,835	-		EFB2_04554	0.58	+0.1
4,785,837	+		EFB2_04554	0.58	-0.9
4,785,837	+		EFB2_04554	0.58	+0.1
4,785,837	+		EFB2_04554	0.58	-1.2
4,785,837	+		EFB2_04554	0.58	+0.4
4,785,837	+		EFB2_04554	0.58	-2.8
4,785,837	+		EFB2_04554	0.58	-0.6
4,785,837	+		EFB2_04554	0.58	+0.2
4,785,837	+		EFB2_04554	0.58	+1.2
4,785,837	+		EFB2_04554	0.58	-0.0
4,785,837	+		EFB2_04554	0.58	+0.7
4,785,837	+		EFB2_04554	0.58	-0.1
4,785,837	+		EFB2_04554	0.58	+0.2
4,785,837	+		EFB2_04554	0.58	+1.0
4,785,837	+		EFB2_04554	0.58	-1.1
4,785,837	+		EFB2_04554	0.58	-1.1
4,785,837	+		EFB2_04554	0.58	+0.4
4,785,837	+		EFB2_04554	0.58	+1.0
4,785,837	+		EFB2_04554	0.58	+0.9
4,785,837	+		EFB2_04554	0.58	-0.7
4,785,838	-		EFB2_04554	0.58	-0.8
4,785,838	-		EFB2_04554	0.58	+0.2
4,785,838	-		EFB2_04554	0.58	-0.1
4,785,838	-		EFB2_04554	0.58	-2.6
4,785,838	-		EFB2_04554	0.58	+0.8
4,785,838	-		EFB2_04554	0.58	-0.8
4,785,838	-		EFB2_04554	0.58	+1.0
4,785,838	-		EFB2_04554	0.58	+0.9
4,785,838	-		EFB2_04554	0.58	-2.2
4,785,838	-		EFB2_04554	0.58	-0.2
4,785,838	-		EFB2_04554	0.58	-0.5
4,785,838	-		EFB2_04554	0.58	-0.6
4,785,838	-		EFB2_04554	0.58	-2.1
4,785,838	-		EFB2_04554	0.58	-0.3
4,785,838	-		EFB2_04554	0.58	+0.5
4,785,838	-		EFB2_04554	0.58	+0.6
4,785,838	-		EFB2_04554	0.58	+1.4
4,785,838	-		EFB2_04554	0.58	+1.4
4,785,838	-		EFB2_04554	0.58	-0.3
4,785,838	-		EFB2_04554	0.58	-0.1
4,785,838	-		EFB2_04554	0.58	+0.8
4,785,838	-		EFB2_04554	0.58	-0.3
4,785,838	-		EFB2_04554	0.58	-0.1
4,785,838	-		EFB2_04554	0.58	-0.2
4,785,838	-		EFB2_04554	0.58	+0.8
4,785,838	-		EFB2_04554	0.58	-0.3
4,785,838	-		EFB2_04554	0.58	-0.1
4,785,838	-		EFB2_04554	0.58	+0.4
4,785,838	-		EFB2_04554	0.58	+0.6
4,785,838	-		EFB2_04554	0.58	+0.4
4,785,841	+		EFB2_04554	0.58	-0.6
4,785,841	+		EFB2_04554	0.58	-1.2
4,785,842	-		EFB2_04554	0.58	+0.5
4,785,869	+		EFB2_04554	0.61	+0.3
4,785,907	+		EFB2_04554	0.65	+0.1
4,785,907	+		EFB2_04554	0.65	-0.5
4,785,908	-		EFB2_04554	0.65	-1.1
4,785,968	+		EFB2_04554	0.71	-1.0
4,785,968	+		EFB2_04554	0.71	+0.9
4,785,968	+		EFB2_04554	0.71	+0.9
4,785,968	+		EFB2_04554	0.71	-1.0
4,785,969	-		EFB2_04554	0.71	-2.1
4,785,969	-		EFB2_04554	0.71	-0.1
4,785,969	-		EFB2_04554	0.71	-2.7
4,785,969	-		EFB2_04554	0.71	-1.6
4,786,017	-		EFB2_04554	0.76	+0.8
4,786,017	-		EFB2_04554	0.76	+0.3
4,786,017	-		EFB2_04554	0.76	-0.0
4,786,045	+		EFB2_04554	0.79	+0.3
4,786,045	+		EFB2_04554	0.79	-1.1
4,786,045	+		EFB2_04554	0.79	-4.1
4,786,045	+		EFB2_04554	0.79	+0.5
4,786,045	+		EFB2_04554	0.79	-2.2
4,786,045	+		EFB2_04554	0.79	-0.3
4,786,045	+		EFB2_04554	0.79	+0.5
4,786,045	+		EFB2_04554	0.79	+1.3
4,786,045	+		EFB2_04554	0.79	+0.0
4,786,045	+		EFB2_04554	0.79	+0.7
4,786,045	+		EFB2_04554	0.79	+2.0
4,786,045	+		EFB2_04554	0.79	-0.6
4,786,045	+		EFB2_04554	0.79	+0.8
4,786,045	+		EFB2_04554	0.79	+0.4
4,786,045	+		EFB2_04554	0.79	+0.2
4,786,045	+		EFB2_04554	0.79	-0.4
4,786,045	+		EFB2_04554	0.79	-0.2
4,786,045	+		EFB2_04554	0.79	+1.5
4,786,045	+		EFB2_04554	0.79	-0.3
4,786,045	+		EFB2_04554	0.79	-0.0
4,786,045	+		EFB2_04554	0.79	-2.4
4,786,045	+		EFB2_04554	0.79	+0.3
4,786,045	+		EFB2_04554	0.79	+0.6
4,786,045	+		EFB2_04554	0.79	+0.0
4,786,045	+		EFB2_04554	0.79	+0.2
4,786,045	+		EFB2_04554	0.79	-0.2
4,786,045	+		EFB2_04554	0.79	+0.5
4,786,045	+		EFB2_04554	0.79	+0.1
4,786,046	-		EFB2_04554	0.79	-1.9
4,786,046	-		EFB2_04554	0.79	+1.5
4,786,046	-		EFB2_04554	0.79	-0.4
4,786,046	-		EFB2_04554	0.79	+1.2
4,786,046	-		EFB2_04554	0.79	+0.3
4,786,046	-		EFB2_04554	0.79	-2.5
4,786,046	-		EFB2_04554	0.79	-0.1
4,786,046	-		EFB2_04554	0.79	-1.4
4,786,046	-		EFB2_04554	0.79	+0.4
4,786,046	-		EFB2_04554	0.79	+0.2
4,786,046	-		EFB2_04554	0.79	+1.0
4,786,046	-		EFB2_04554	0.79	-2.6
4,786,046	-		EFB2_04554	0.79	+0.4
4,786,046	-		EFB2_04554	0.79	-0.6
4,786,046	-		EFB2_04554	0.79	+0.4
4,786,046	-		EFB2_04554	0.79	+1.0
4,786,046	-		EFB2_04554	0.79	+0.8
4,786,046	-		EFB2_04554	0.79	-0.7
4,786,046	-		EFB2_04554	0.79	+0.7
4,786,046	-		EFB2_04554	0.79	+0.3
4,786,046	-		EFB2_04554	0.79	-2.1
4,786,046	-		EFB2_04554	0.79	-0.2
4,786,046	-		EFB2_04554	0.79	-0.5
4,786,071	+		EFB2_04554	0.82	-1.1
4,786,072	+		EFB2_04554	0.82	+1.2
4,786,072	+		EFB2_04554	0.82	+1.8
4,786,072	+		EFB2_04554	0.82	-0.2
4,786,072	+		EFB2_04554	0.82	+0.2
4,786,072	+		EFB2_04554	0.82	-0.5
4,786,072	+		EFB2_04554	0.82	+0.6
4,786,072	+		EFB2_04554	0.82	-1.8
4,786,072	+		EFB2_04554	0.82	-0.3
4,786,072	+		EFB2_04554	0.82	-1.6
4,786,072	+		EFB2_04554	0.82	+1.1
4,786,072	+		EFB2_04554	0.82	-0.7
4,786,072	+		EFB2_04554	0.82	+0.8
4,786,072	+		EFB2_04554	0.82	-2.8
4,786,072	+		EFB2_04554	0.82	+0.4
4,786,072	+		EFB2_04554	0.82	-0.2
4,786,072	+		EFB2_04554	0.82	+0.6
4,786,072	+		EFB2_04554	0.82	+0.0
4,786,072	+		EFB2_04554	0.82	-0.1
4,786,072	+		EFB2_04554	0.82	+0.5
4,786,072	+		EFB2_04554	0.82	+0.2
4,786,072	+		EFB2_04554	0.82	+1.0
4,786,072	+		EFB2_04554	0.82	-1.6
4,786,072	+		EFB2_04554	0.82	+0.8
4,786,072	+		EFB2_04554	0.82	-0.5
4,786,073	-		EFB2_04554	0.82	+0.1
4,786,073	-		EFB2_04554	0.82	+0.6
4,786,073	-		EFB2_04554	0.82	-0.6
4,786,073	-		EFB2_04554	0.82	-2.5
4,786,073	-		EFB2_04554	0.82	+0.2
4,786,073	-		EFB2_04554	0.82	-1.3
4,786,073	-		EFB2_04554	0.82	+0.3
4,786,073	-		EFB2_04554	0.82	+0.1
4,786,073	-		EFB2_04554	0.82	-0.1
4,786,073	-		EFB2_04554	0.82	+0.5
4,786,073	-		EFB2_04554	0.82	-1.2
4,786,073	-		EFB2_04554	0.82	+0.6
4,786,073	-		EFB2_04554	0.82	+0.4
4,786,073	-		EFB2_04554	0.82	+0.2
4,786,073	-		EFB2_04554	0.82	+1.5
4,786,073	-		EFB2_04554	0.82	+0.8
4,786,075	-		EFB2_04554	0.82	+0.6
4,786,075	-		EFB2_04554	0.82	+0.6
4,786,075	-		EFB2_04554	0.82	+1.5
4,786,075	-		EFB2_04554	0.82	-0.8
4,786,107	+		EFB2_04554	0.85	+0.4
4,786,107	+		EFB2_04554	0.85	-0.0
4,786,143	+		EFB2_04554	0.89	-0.3
4,786,143	+		EFB2_04554	0.89	-1.0
4,786,143	+		EFB2_04554	0.89	+0.7
4,786,144	-		EFB2_04554	0.89	-0.6
4,786,144	-		EFB2_04554	0.89	+1.9
4,786,144	-		EFB2_04554	0.89	-2.1
4,786,249	+				+2.1
4,786,250	-				+0.2
4,786,288	+				-0.2
4,786,288	+				-1.2
4,786,288	+				-0.1
4,786,288	+				-0.2
4,786,288	+				+0.4
4,786,289	-				-0.3
4,786,289	-				-0.5
4,786,289	-				+0.7
4,786,289	-				-0.3
4,786,289	-				+0.1
4,786,289	-				+1.9
4,786,289	-				-0.8
4,786,289	-				-0.8
4,786,289	-				-0.6
4,786,290	+				-1.6
4,786,290	+				-1.7
4,786,290	+				+0.5
4,786,291	-				-2.3
4,786,291	-				-0.7
4,786,291	-				-0.0
4,786,291	-				-1.5
4,786,301	+				+0.5
4,786,301	+				+0.4
4,786,301	+				+0.5
4,786,301	+				+0.4
4,786,301	+				-0.3
4,786,301	+				-0.3
4,786,301	+				-3.0
4,786,301	+				+1.8
4,786,301	+				-0.9
4,786,301	+				+1.5
4,786,301	+				+0.8
4,786,301	+				-0.4
4,786,301	+				-2.8
4,786,301	+				+0.4
4,786,301	+				-2.8
4,786,301	+				-0.5
4,786,301	+				+0.1
4,786,302	-				+0.6
4,786,302	-				+0.4
4,786,302	-				-0.4
4,786,302	-				-0.3
4,786,302	-				-0.3
4,786,302	-				+1.2
4,786,302	-				+0.3
4,786,302	-				+1.2
4,786,302	-				-2.6
4,786,302	-				+0.2
4,786,305	+				+0.7
4,786,305	+				-0.8
4,786,305	+				-0.8
4,786,305	+				-0.0
4,786,305	+				+0.3
4,786,305	+				+0.3
4,786,305	+				+0.1
4,786,305	+				-1.1
4,786,305	+				+0.4
4,786,306	-				+0.2
4,786,306	-				-0.2
4,786,306	-				+0.4
4,786,306	-				+0.0
4,786,306	-				-1.1
4,786,306	-				+1.0
4,786,306	-				-2.0
4,786,306	-				-0.4
4,786,306	-				-0.6
4,786,310	+				-1.8
4,786,310	+				+0.3
4,786,310	+				-0.8
4,786,310	+				-0.5
4,786,311	-				+1.5
4,786,341	-				+0.8
4,786,341	-				+1.7
4,786,366	+				-2.1
4,786,366	+				-0.6
4,786,367	-				-1.7
4,786,376	+				-0.7
4,786,376	+				+0.8
4,786,376	+				+2.3
4,786,376	+				-0.6
4,786,376	+				-0.6
4,786,377	-				-0.4
4,786,377	-				+0.6
4,786,377	-				+0.2
4,786,377	-				-1.2
4,786,377	-				-0.9
4,786,377	-				-1.3
4,786,382	+				-0.1
4,786,382	+				+1.4
4,786,382	+				+0.1
4,786,390	+				+1.9
4,786,390	+				+0.3
4,786,390	+				+0.2
4,786,390	+				-3.6
4,786,390	+				+1.0
4,786,391	-				-1.0
4,786,391	-				-0.6
4,786,391	-				-0.3
4,786,391	-				-1.4
4,786,391	-				-0.1
4,786,391	-				-0.7
4,786,391	-				-0.3
4,786,391	-				+0.9
4,786,391	-				-1.3
4,786,391	-				+0.6
4,786,421	-				-1.0
4,786,435	+				+0.4
4,786,435	+				+0.3
4,786,523	+		EFB2_04555	0.44	+0.3
4,786,523	+		EFB2_04555	0.44	+1.7
4,786,523	+		EFB2_04555	0.44	-3.5
4,786,523	+		EFB2_04555	0.44	-0.6
4,786,523	+		EFB2_04555	0.44	-0.3
4,786,523	+		EFB2_04555	0.44	-1.2
4,786,523	+		EFB2_04555	0.44	+0.3
4,786,523	+		EFB2_04555	0.44	+0.4
4,786,523	+		EFB2_04555	0.44	-0.2
4,786,523	+		EFB2_04555	0.44	+0.1
4,786,523	+		EFB2_04555	0.44	-0.5
4,786,523	+		EFB2_04555	0.44	-1.1
4,786,523	+		EFB2_04555	0.44	-1.7
4,786,524	-		EFB2_04555	0.44	+1.3
4,786,524	-		EFB2_04555	0.44	-0.0
4,786,524	-		EFB2_04555	0.44	+0.0
4,786,524	-		EFB2_04555	0.44	+1.1
4,786,524	-		EFB2_04555	0.44	+0.2
4,786,524	-		EFB2_04555	0.44	+0.4
4,786,524	-		EFB2_04555	0.44	+0.2
4,786,524	-		EFB2_04555	0.44	+0.1
4,786,524	-		EFB2_04555	0.44	-1.9
4,786,524	-		EFB2_04555	0.44	+1.1
4,786,524	-		EFB2_04555	0.44	-1.9
4,786,524	-		EFB2_04555	0.44	+0.2
4,786,524	-		EFB2_04555	0.44	-1.8
4,786,556	+		EFB2_04555	0.58	+0.6
4,786,556	+		EFB2_04555	0.58	+1.3
4,786,556	+		EFB2_04555	0.58	+1.5
4,786,556	+		EFB2_04555	0.58	-0.5
4,786,556	+		EFB2_04555	0.58	-0.5
4,786,556	+		EFB2_04555	0.58	+0.2
4,786,556	+		EFB2_04555	0.58	-0.2
4,786,556	+		EFB2_04555	0.58	-0.6
4,786,556	+		EFB2_04555	0.58	-1.6
4,786,557	-		EFB2_04555	0.58	-0.9
4,786,557	-		EFB2_04555	0.58	+2.7
4,786,557	-		EFB2_04555	0.58	-0.2
4,786,557	-		EFB2_04555	0.58	+0.2
4,786,557	-		EFB2_04555	0.58	-0.3
4,786,557	-		EFB2_04555	0.58	+0.9
4,786,557	-		EFB2_04555	0.58	-1.1
4,786,557	-		EFB2_04555	0.58	+0.3
4,786,586	+		EFB2_04555	0.70	+0.8
4,786,587	-		EFB2_04555	0.70	+0.8
4,786,589	+		EFB2_04555	0.71	-2.1
4,786,590	-		EFB2_04555	0.72	+0.9
4,786,638	+				-1.9
4,786,638	+				-2.5
4,786,638	+				+0.4
4,786,638	+				-0.3
4,786,639	-				+1.8
4,786,639	-				+0.7
4,786,647	+				+1.2
4,786,647	+				+3.3
4,786,647	+				-1.5
4,786,648	-				-0.5
4,786,648	-				+0.8
4,786,673	+				+0.7
4,786,674	-				-0.2
4,786,695	-				+1.0
4,786,695	-				-0.6
4,786,695	-				-0.5
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