Strain Fitness in Escherichia fergusonii Becca around EFB2_03563

Experiment: phage mixed community; hk phage cocktail 1 MOI; 14 member community plus Klebsiella pneumoniae

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	phage mixed community; hk phage cocktail 1 MOI; 14 member community plus Klebsiella pneumoniae
3,721,953	-		EFB2_03561	0.78	-0.0
3,721,953	-		EFB2_03561	0.78	+0.1
3,721,953	-		EFB2_03561	0.78	+0.5
3,721,965	+		EFB2_03561	0.80	-1.7
3,721,965	+		EFB2_03561	0.80	-0.5
3,721,965	+		EFB2_03561	0.80	+0.2
3,721,966	-		EFB2_03561	0.80	-1.7
3,721,966	-		EFB2_03561	0.80	-1.2
3,721,966	-		EFB2_03561	0.80	+0.4
3,721,997	+		EFB2_03561	0.86	+0.4
3,721,997	+		EFB2_03561	0.86	+1.8
3,721,998	-		EFB2_03561	0.86	+1.0
3,722,028	-				+0.0
3,722,062	+				-0.6
3,722,062	+				+0.8
3,722,062	+				-0.2
3,722,062	+				-0.0
3,722,063	-				-0.8
3,722,063	-				+2.2
3,722,063	-				-1.2
3,722,065	+				+0.7
3,722,065	+				-0.6
3,722,065	+				+1.2
3,722,079	+				+1.1
3,722,079	+				+0.8
3,722,080	-				-0.9
3,722,080	-				+1.4
3,722,080	-				-4.3
3,722,103	+				-2.9
3,722,110	-				+0.9
3,722,126	+				+0.1
3,722,126	+				+2.1
3,722,126	+				+3.4
3,722,126	+				-0.1
3,722,126	+				-0.8
3,722,126	+				-0.3
3,722,127	-				+1.5
3,722,127	-				-1.5
3,722,127	-				-0.3
3,722,127	-				-1.2
3,722,130	+				+0.2
3,722,131	-				-0.4
3,722,148	+				+0.5
3,722,148	+				+1.9
3,722,148	+				-1.8
3,722,148	+				+0.9
3,722,148	+				+0.4
3,722,148	+				+1.2
3,722,149	-				+2.9
3,722,175	-				-2.2
3,722,175	-				-0.6
3,722,250	+		EFB2_03562	0.18	+0.8
3,722,250	+		EFB2_03562	0.18	+1.5
3,722,250	+		EFB2_03562	0.18	-1.4
3,722,250	+		EFB2_03562	0.18	+0.1
3,722,325	+		EFB2_03562	0.28	+2.1
3,722,326	-		EFB2_03562	0.28	-1.2
3,722,326	-		EFB2_03562	0.28	-0.0
3,722,335	+		EFB2_03562	0.29	-1.8
3,722,335	+		EFB2_03562	0.29	+1.0
3,722,335	+		EFB2_03562	0.29	-0.8
3,722,335	+		EFB2_03562	0.29	+0.9
3,722,336	-		EFB2_03562	0.29	+0.4
3,722,336	-		EFB2_03562	0.29	-2.1
3,722,336	-		EFB2_03562	0.29	-2.5
3,722,336	-		EFB2_03562	0.29	+0.3
3,722,336	-		EFB2_03562	0.29	+1.5
3,722,336	-		EFB2_03562	0.29	+0.4
3,722,346	+		EFB2_03562	0.31	+0.5
3,722,346	+		EFB2_03562	0.31	-0.6
3,722,346	+		EFB2_03562	0.31	-2.0
3,722,346	+		EFB2_03562	0.31	+0.3
3,722,347	-		EFB2_03562	0.31	-2.4
3,722,347	-		EFB2_03562	0.31	+2.0
3,722,347	-		EFB2_03562	0.31	+0.2
3,722,368	+		EFB2_03562	0.33	-0.7
3,722,368	+		EFB2_03562	0.33	+0.2
3,722,368	+		EFB2_03562	0.33	+0.9
3,722,368	+		EFB2_03562	0.33	+0.6
3,722,368	+		EFB2_03562	0.33	-2.5
3,722,368	+		EFB2_03562	0.33	-0.1
3,722,368	+		EFB2_03562	0.33	-0.9
3,722,368	+		EFB2_03562	0.33	+0.8
3,722,368	+		EFB2_03562	0.33	+0.4
3,722,368	+		EFB2_03562	0.33	-1.4
3,722,368	+		EFB2_03562	0.33	-0.3
3,722,368	+		EFB2_03562	0.33	-1.5
3,722,368	+		EFB2_03562	0.33	-2.2
3,722,368	+		EFB2_03562	0.33	-0.1
3,722,368	+		EFB2_03562	0.33	+0.7
3,722,368	+		EFB2_03562	0.33	-0.2
3,722,368	+		EFB2_03562	0.33	-0.0
3,722,368	+		EFB2_03562	0.33	-0.6
3,722,368	+		EFB2_03562	0.33	+0.2
3,722,368	+		EFB2_03562	0.33	+0.7
3,722,368	+		EFB2_03562	0.33	-1.1
3,722,368	+		EFB2_03562	0.33	+0.2
3,722,368	+		EFB2_03562	0.33	-1.2
3,722,368	+		EFB2_03562	0.33	+0.2
3,722,368	+		EFB2_03562	0.33	+0.1
3,722,368	+		EFB2_03562	0.33	-0.9
3,722,368	+		EFB2_03562	0.33	-0.5
3,722,368	+		EFB2_03562	0.33	+0.9
3,722,368	+		EFB2_03562	0.33	+1.5
3,722,368	+		EFB2_03562	0.33	+0.4
3,722,368	+		EFB2_03562	0.33	+0.4
3,722,368	+		EFB2_03562	0.33	+1.2
3,722,368	+		EFB2_03562	0.33	-1.7
3,722,368	+		EFB2_03562	0.33	-1.3
3,722,368	+		EFB2_03562	0.33	+1.4
3,722,368	+		EFB2_03562	0.33	+0.5
3,722,368	+		EFB2_03562	0.33	+0.5
3,722,368	+		EFB2_03562	0.33	+0.0
3,722,368	+		EFB2_03562	0.33	-0.5
3,722,368	+		EFB2_03562	0.33	-2.3
3,722,368	+		EFB2_03562	0.33	-0.3
3,722,368	+		EFB2_03562	0.33	-0.1
3,722,368	+		EFB2_03562	0.33	+1.0
3,722,368	+		EFB2_03562	0.33	+1.4
3,722,368	+		EFB2_03562	0.33	+0.2
3,722,368	+		EFB2_03562	0.33	+4.2
3,722,369	-		EFB2_03562	0.34	-1.7
3,722,369	-		EFB2_03562	0.34	+0.8
3,722,369	-		EFB2_03562	0.34	-0.8
3,722,369	-		EFB2_03562	0.34	-0.5
3,722,369	-		EFB2_03562	0.34	+1.4
3,722,369	-		EFB2_03562	0.34	+1.9
3,722,369	-		EFB2_03562	0.34	+1.9
3,722,369	-		EFB2_03562	0.34	+0.6
3,722,369	-		EFB2_03562	0.34	+1.1
3,722,369	-		EFB2_03562	0.34	-2.5
3,722,369	-		EFB2_03562	0.34	-0.8
3,722,369	-		EFB2_03562	0.34	+1.4
3,722,369	-		EFB2_03562	0.34	-1.3
3,722,369	-		EFB2_03562	0.34	-0.7
3,722,369	-		EFB2_03562	0.34	-0.3
3,722,369	-		EFB2_03562	0.34	-0.7
3,722,369	-		EFB2_03562	0.34	+2.3
3,722,369	-		EFB2_03562	0.34	-2.4
3,722,369	-		EFB2_03562	0.34	+1.3
3,722,369	-		EFB2_03562	0.34	-0.3
3,722,369	-		EFB2_03562	0.34	+0.1
3,722,369	-		EFB2_03562	0.34	+0.6
3,722,369	-		EFB2_03562	0.34	-0.9
3,722,369	-		EFB2_03562	0.34	-1.3
3,722,369	-		EFB2_03562	0.34	+1.0
3,722,369	-		EFB2_03562	0.34	+0.7
3,722,369	-		EFB2_03562	0.34	-0.2
3,722,369	-		EFB2_03562	0.34	-1.7
3,722,369	-		EFB2_03562	0.34	-1.8
3,722,369	-		EFB2_03562	0.34	+2.3
3,722,369	-		EFB2_03562	0.34	-2.3
3,722,369	-		EFB2_03562	0.34	-0.3
3,722,369	-		EFB2_03562	0.34	-3.2
3,722,369	-		EFB2_03562	0.34	+0.1
3,722,369	-		EFB2_03562	0.34	-0.3
3,722,369	-		EFB2_03562	0.34	+2.1
3,722,369	-		EFB2_03562	0.34	-0.9
3,722,369	-		EFB2_03562	0.34	+1.7
3,722,369	-		EFB2_03562	0.34	+2.1
3,722,369	-		EFB2_03562	0.34	-1.0
3,722,369	-		EFB2_03562	0.34	-0.6
3,722,369	-		EFB2_03562	0.34	+0.2
3,722,369	-		EFB2_03562	0.34	+0.9
3,722,369	-		EFB2_03562	0.34	-0.7
3,722,369	-		EFB2_03562	0.34	-0.3
3,722,369	-		EFB2_03562	0.34	-0.8
3,722,369	-		EFB2_03562	0.34	+1.8
3,722,369	-		EFB2_03562	0.34	+0.0
3,722,369	-		EFB2_03562	0.34	-1.3
3,722,369	-		EFB2_03562	0.34	+1.0
3,722,490	+		EFB2_03562	0.49	+0.9
3,722,490	+		EFB2_03562	0.49	+0.4
3,722,490	+		EFB2_03562	0.49	-1.4
3,722,490	+		EFB2_03562	0.49	-2.7
3,722,491	-		EFB2_03562	0.49	+0.6
3,722,491	-		EFB2_03562	0.49	-0.2
3,722,491	-		EFB2_03562	0.49	+0.3
3,722,491	-		EFB2_03562	0.49	-0.5
3,722,491	-		EFB2_03562	0.49	+0.7
3,722,491	-		EFB2_03562	0.49	+0.2
3,722,519	+		EFB2_03562	0.53	-0.8
3,722,520	-		EFB2_03562	0.53	-1.2
3,722,556	+		EFB2_03562	0.58	-1.1
3,722,557	-		EFB2_03562	0.58	+1.4
3,722,560	+		EFB2_03562	0.58	+0.9
3,722,560	+		EFB2_03562	0.58	+0.8
3,722,560	+		EFB2_03562	0.58	-0.1
3,722,560	+		EFB2_03562	0.58	-1.2
3,722,561	-		EFB2_03562	0.58	+0.7
3,722,561	-		EFB2_03562	0.58	+0.8
3,722,561	-		EFB2_03562	0.58	+0.7
3,722,561	-		EFB2_03562	0.58	-2.1
3,722,616	+		EFB2_03562	0.66	-0.2
3,722,617	-		EFB2_03562	0.66	-0.3
3,722,617	-		EFB2_03562	0.66	-0.7
3,722,649	+		EFB2_03562	0.70	-0.6
3,722,650	-		EFB2_03562	0.70	-1.3
3,722,688	+		EFB2_03562	0.75	+2.7
3,722,688	+		EFB2_03562	0.75	-1.0
3,722,689	-		EFB2_03562	0.75	+0.3
3,722,724	+		EFB2_03562	0.80	+0.9
3,722,724	+		EFB2_03562	0.80	+0.6
3,722,724	+		EFB2_03562	0.80	+0.4
3,722,724	+		EFB2_03562	0.80	-1.4
3,722,725	-		EFB2_03562	0.80	-0.6
3,722,725	-		EFB2_03562	0.80	-0.3
3,722,770	-		EFB2_03562	0.86	-2.9
3,722,770	-		EFB2_03562	0.86	-0.7
3,722,832	+				-1.0
3,722,833	-				+0.0
3,722,833	-				-1.7
3,722,833	-				+1.0
3,722,833	-				+0.5
3,722,867	+				+0.4
3,722,868	-				-2.3
3,722,896	+				+2.6
3,722,897	-				-1.0
3,722,897	-				+2.1
3,722,919	-				-0.9
3,722,949	-				+1.0
3,722,949	-				+0.3
3,722,955	+				-2.0
3,722,956	-				+1.1
3,722,976	+				+0.9
3,723,025	+				-0.9
3,723,025	+				-3.6
3,723,025	+				+0.9
3,723,025	+				-0.1
3,723,026	-				+0.0
3,723,026	-				-1.3
3,723,042	+		EFB2_03563	0.12	+0.0
3,723,043	-		EFB2_03563	0.12	+0.3
3,723,043	-		EFB2_03563	0.12	-0.3
3,723,062	+		EFB2_03563	0.14	-0.2
3,723,063	-		EFB2_03563	0.14	+0.9
3,723,094	+		EFB2_03563	0.18	+0.7
3,723,095	-		EFB2_03563	0.18	-0.6
3,723,095	-		EFB2_03563	0.18	+0.4
3,723,095	-		EFB2_03563	0.18	-0.5
3,723,095	-		EFB2_03563	0.18	-0.1
3,723,108	+		EFB2_03563	0.20	-0.6
3,723,108	+		EFB2_03563	0.20	+1.3
3,723,182	+		EFB2_03563	0.28	-0.6
3,723,182	+		EFB2_03563	0.28	+0.4
3,723,182	+		EFB2_03563	0.28	+0.8
3,723,182	+		EFB2_03563	0.28	-0.1
3,723,182	+		EFB2_03563	0.28	+0.5
3,723,182	+		EFB2_03563	0.28	+0.4
3,723,182	+		EFB2_03563	0.28	+0.0
3,723,182	+		EFB2_03563	0.28	-0.2
3,723,182	+		EFB2_03563	0.28	-0.7
3,723,182	+		EFB2_03563	0.28	-0.2
3,723,182	+		EFB2_03563	0.28	+0.0
3,723,183	-		EFB2_03563	0.28	-2.0
3,723,183	-		EFB2_03563	0.28	+0.5
3,723,183	-		EFB2_03563	0.28	+1.2
3,723,183	-		EFB2_03563	0.28	+1.2
3,723,183	-		EFB2_03563	0.28	-0.5
3,723,183	-		EFB2_03563	0.28	-3.0
3,723,183	-		EFB2_03563	0.28	+0.1
3,723,183	-		EFB2_03563	0.28	-0.3
3,723,183	-		EFB2_03563	0.28	-0.1
3,723,183	-		EFB2_03563	0.28	+2.9
3,723,183	-		EFB2_03563	0.28	+0.8
3,723,183	-		EFB2_03563	0.28	+0.2
3,723,183	-		EFB2_03563	0.28	-1.5
3,723,183	-		EFB2_03563	0.28	-1.1
3,723,183	-		EFB2_03563	0.28	+1.0
3,723,183	-		EFB2_03563	0.28	+0.7
3,723,184	+		EFB2_03563	0.28	-0.0
3,723,184	+		EFB2_03563	0.28	-1.4
3,723,184	+		EFB2_03563	0.28	+0.1
3,723,184	+		EFB2_03563	0.28	-0.1
3,723,184	+		EFB2_03563	0.28	+0.3
3,723,184	+		EFB2_03563	0.28	-0.5
3,723,184	+		EFB2_03563	0.28	-0.4
3,723,184	+		EFB2_03563	0.28	+0.0
3,723,184	+		EFB2_03563	0.28	-0.4
3,723,184	+		EFB2_03563	0.28	-0.6
3,723,184	+		EFB2_03563	0.28	-0.3
3,723,185	-		EFB2_03563	0.29	-1.6
3,723,185	-		EFB2_03563	0.29	+2.1
3,723,185	-		EFB2_03563	0.29	-1.0
3,723,185	-		EFB2_03563	0.29	-0.7
3,723,185	-		EFB2_03563	0.29	+1.7
3,723,185	-		EFB2_03563	0.29	-1.1
3,723,185	-		EFB2_03563	0.29	+0.9
3,723,185	-		EFB2_03563	0.29	+0.3
3,723,185	-		EFB2_03563	0.29	+1.8
3,723,209	+		EFB2_03563	0.31	+0.2
3,723,261	+		EFB2_03563	0.37	-0.8
3,723,261	+		EFB2_03563	0.37	+1.1
3,723,262	-		EFB2_03563	0.38	+0.6
3,723,328	+		EFB2_03563	0.45	+1.0
3,723,328	+		EFB2_03563	0.45	+0.2
3,723,328	+		EFB2_03563	0.45	-3.4
3,723,329	-		EFB2_03563	0.45	+0.3
3,723,329	-		EFB2_03563	0.45	+1.0
3,723,329	-		EFB2_03563	0.45	-0.9
3,723,487	+		EFB2_03563	0.64	+0.6
3,723,534	+		EFB2_03563	0.69	-0.8
3,723,534	+		EFB2_03563	0.69	+0.1
3,723,653	+		EFB2_03563	0.83	-0.6
3,723,654	-		EFB2_03563	0.83	+0.4
3,723,654	-		EFB2_03563	0.83	-2.2
3,723,654	-		EFB2_03563	0.83	-0.0
3,723,654	-		EFB2_03563	0.83	+0.0
3,723,705	+		EFB2_03563	0.89	-0.5
3,723,705	+		EFB2_03563	0.89	-2.3
3,723,705	+		EFB2_03563	0.89	-2.7
3,723,705	+		EFB2_03563	0.89	+1.7
3,723,705	+		EFB2_03563	0.89	-2.1
3,723,705	+		EFB2_03563	0.89	+0.2
3,723,706	-		EFB2_03563	0.89	+1.4
3,723,706	-		EFB2_03563	0.89	-0.5
3,723,706	-		EFB2_03563	0.89	-0.7
3,723,763	+				-0.3
3,723,763	+				+1.5
3,723,763	+				+0.4
3,723,764	-				+0.0
3,723,764	-				+0.2
3,723,778	+				-0.4
3,723,778	+				-2.1
3,723,778	+				-1.4
3,723,778	+				-0.7
3,723,778	+				-0.8
3,723,778	+				+0.3
3,723,778	+				+0.6
3,723,778	+				+1.1
3,723,778	+				+0.1
3,723,779	-				-0.6
3,723,779	-				-1.8
3,723,779	-				-2.3
3,723,779	-				+1.1
3,723,779	-				-0.3
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