Strain Fitness in Escherichia fergusonii Becca around EFB2_02550

Experiment: phage mixed community; hk phage cocktail 1 MOI; 14 member community plus Klebsiella pneumoniae

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	phage mixed community; hk phage cocktail 1 MOI; 14 member community plus Klebsiella pneumoniae
2,685,572	+		EFB2_02549	0.22	+2.6
2,685,581	+		EFB2_02549	0.22	-0.7
2,685,582	-		EFB2_02549	0.22	-1.4
2,685,588	+		EFB2_02549	0.23	-0.6
2,685,588	+		EFB2_02549	0.23	-0.8
2,685,588	+		EFB2_02549	0.23	-2.1
2,685,588	+		EFB2_02549	0.23	-0.9
2,685,589	-		EFB2_02549	0.23	+1.9
2,685,589	-		EFB2_02549	0.23	+0.9
2,685,589	-		EFB2_02549	0.23	-1.5
2,685,589	-		EFB2_02549	0.23	+0.7
2,685,610	-		EFB2_02549	0.25	-0.8
2,685,626	+		EFB2_02549	0.26	+1.4
2,685,626	+		EFB2_02549	0.26	+1.2
2,685,626	+		EFB2_02549	0.26	-2.4
2,685,626	+		EFB2_02549	0.26	-0.2
2,685,627	-		EFB2_02549	0.26	+0.3
2,685,627	-		EFB2_02549	0.26	-0.1
2,685,629	+		EFB2_02549	0.26	+2.3
2,685,629	+		EFB2_02549	0.26	-1.1
2,685,629	+		EFB2_02549	0.26	+0.1
2,685,629	+		EFB2_02549	0.26	-1.5
2,685,630	-		EFB2_02549	0.27	-0.1
2,685,720	-		EFB2_02549	0.34	+0.5
2,685,731	+		EFB2_02549	0.35	+4.0
2,685,762	+		EFB2_02549	0.38	+0.9
2,685,762	+		EFB2_02549	0.38	+1.4
2,685,762	+		EFB2_02549	0.38	-0.2
2,685,762	+		EFB2_02549	0.38	+1.2
2,685,763	-		EFB2_02549	0.38	-0.4
2,685,777	+		EFB2_02549	0.39	+3.7
2,685,777	+		EFB2_02549	0.39	+2.1
2,685,777	+		EFB2_02549	0.39	-0.9
2,685,777	+		EFB2_02549	0.39	+0.6
2,685,778	-		EFB2_02549	0.39	+1.9
2,685,778	-		EFB2_02549	0.39	-1.8
2,685,778	-		EFB2_02549	0.39	-2.7
2,685,778	-		EFB2_02549	0.39	-0.1
2,685,789	-		EFB2_02549	0.40	-0.1
2,685,821	-		EFB2_02549	0.43	-1.2
2,685,919	+		EFB2_02549	0.51	-2.0
2,685,919	+		EFB2_02549	0.51	-1.8
2,685,919	+		EFB2_02549	0.51	-0.7
2,685,919	+		EFB2_02549	0.51	+1.2
2,685,919	+		EFB2_02549	0.51	-2.3
2,685,919	+		EFB2_02549	0.51	-1.5
2,685,919	+		EFB2_02549	0.51	+1.9
2,685,919	+		EFB2_02549	0.51	-2.4
2,685,919	+		EFB2_02549	0.51	+1.4
2,685,919	+		EFB2_02549	0.51	+1.4
2,685,919	+		EFB2_02549	0.51	-0.4
2,685,919	+		EFB2_02549	0.51	+0.9
2,685,919	+		EFB2_02549	0.51	+0.4
2,685,919	+		EFB2_02549	0.51	-1.1
2,685,919	+		EFB2_02549	0.51	+1.1
2,685,919	+		EFB2_02549	0.51	+0.4
2,685,919	+		EFB2_02549	0.51	+0.4
2,685,919	+		EFB2_02549	0.51	+0.3
2,685,919	+		EFB2_02549	0.51	+2.2
2,685,919	+		EFB2_02549	0.51	-0.2
2,685,919	+		EFB2_02549	0.51	+0.1
2,685,919	+		EFB2_02549	0.51	-0.1
2,685,919	+		EFB2_02549	0.51	+1.7
2,685,919	+		EFB2_02549	0.51	-0.6
2,685,919	+		EFB2_02549	0.51	-1.4
2,685,919	+		EFB2_02549	0.51	+1.8
2,685,919	+		EFB2_02549	0.51	+1.4
2,685,919	+		EFB2_02549	0.51	+1.7
2,685,919	+		EFB2_02549	0.51	+0.4
2,685,919	+		EFB2_02549	0.51	+1.9
2,685,919	+		EFB2_02549	0.51	-1.6
2,685,919	+		EFB2_02549	0.51	+2.1
2,685,919	+		EFB2_02549	0.51	+0.9
2,685,919	+		EFB2_02549	0.51	-0.1
2,685,919	+		EFB2_02549	0.51	+0.3
2,685,920	-		EFB2_02549	0.51	+0.5
2,685,920	-		EFB2_02549	0.51	-1.6
2,685,920	-		EFB2_02549	0.51	-2.7
2,685,920	-		EFB2_02549	0.51	+0.4
2,685,920	-		EFB2_02549	0.51	-0.7
2,685,920	-		EFB2_02549	0.51	-0.1
2,685,920	-		EFB2_02549	0.51	+1.6
2,685,920	-		EFB2_02549	0.51	+1.1
2,685,920	-		EFB2_02549	0.51	-0.4
2,685,920	-		EFB2_02549	0.51	+2.9
2,685,920	-		EFB2_02549	0.51	-1.9
2,685,920	-		EFB2_02549	0.51	-0.9
2,685,920	-		EFB2_02549	0.51	-0.6
2,685,920	-		EFB2_02549	0.51	-1.9
2,685,921	+		EFB2_02549	0.51	+1.0
2,685,921	+		EFB2_02549	0.51	-0.4
2,685,921	+		EFB2_02549	0.51	-1.7
2,685,922	-		EFB2_02549	0.51	+0.1
2,685,922	-		EFB2_02549	0.51	-1.0
2,685,922	-		EFB2_02549	0.51	+1.1
2,685,922	-		EFB2_02549	0.51	-0.1
2,685,922	-		EFB2_02549	0.51	+1.4
2,685,922	-		EFB2_02549	0.51	-2.1
2,686,106	-		EFB2_02549	0.67	-1.8
2,686,106	-		EFB2_02549	0.67	-1.5
2,686,138	-		EFB2_02549	0.70	-2.1
2,686,204	-		EFB2_02549	0.75	-1.2
2,686,210	+		EFB2_02549	0.76	-0.7
2,686,268	+		EFB2_02549	0.81	-0.1
2,686,308	+		EFB2_02549	0.84	+4.0
2,686,309	-		EFB2_02549	0.84	-2.0
2,686,309	-		EFB2_02549	0.84	+2.4
2,686,327	+		EFB2_02549	0.86	+1.2
2,686,327	+		EFB2_02549	0.86	+0.6
2,686,341	+		EFB2_02549	0.87	-1.7
2,686,433	+				+0.5
2,686,433	+				+0.3
2,686,433	+				-1.1
2,686,453	+				+2.4
2,686,453	+				+3.8
2,686,489	+				-2.2
2,686,506	+				-0.3
2,686,507	-				+1.8
2,686,507	-				-0.6
2,686,527	+				-0.7
2,686,527	+				-0.0
2,686,527	+				-1.2
2,686,537	+				+0.3
2,686,576	+				+0.4
2,686,577	-				-1.7
2,686,577	-				-0.9
2,686,577	-				+0.7
2,686,577	-				+0.4
2,686,585	+				-2.0
2,686,588	+				+2.7
2,686,610	-		EFB2_02550	0.13	+1.1
2,686,610	-		EFB2_02550	0.13	-2.1
2,686,610	-		EFB2_02550	0.13	-1.0
2,686,610	-		EFB2_02550	0.13	+0.5
2,686,631	-		EFB2_02550	0.16	+0.9
2,686,631	-		EFB2_02550	0.16	-2.1
2,686,666	+		EFB2_02550	0.21	-0.7
2,686,666	+		EFB2_02550	0.21	-0.7
2,686,666	+		EFB2_02550	0.21	+0.6
2,686,667	-		EFB2_02550	0.21	+0.6
2,686,667	-		EFB2_02550	0.21	+1.5
2,686,667	-		EFB2_02550	0.21	+0.1
2,686,669	+		EFB2_02550	0.21	-1.1
2,686,669	+		EFB2_02550	0.21	-3.0
2,686,669	+		EFB2_02550	0.21	-1.7
2,686,701	+		EFB2_02550	0.26	-1.1
2,686,701	+		EFB2_02550	0.26	-1.1
2,686,702	-		EFB2_02550	0.26	+0.4
2,686,702	-		EFB2_02550	0.26	+1.5
2,686,712	-		EFB2_02550	0.28	+3.9
2,686,720	+		EFB2_02550	0.29	-0.9
2,686,720	+		EFB2_02550	0.29	+0.4
2,686,720	+		EFB2_02550	0.29	+1.0
2,686,720	+		EFB2_02550	0.29	-1.3
2,686,720	+		EFB2_02550	0.29	+1.1
2,686,720	+		EFB2_02550	0.29	-1.0
2,686,720	+		EFB2_02550	0.29	+0.9
2,686,721	-		EFB2_02550	0.29	-1.3
2,686,721	-		EFB2_02550	0.29	-1.6
2,686,721	-		EFB2_02550	0.29	-2.8
2,686,721	-		EFB2_02550	0.29	-0.4
2,686,758	-		EFB2_02550	0.35	-0.1
2,686,758	-		EFB2_02550	0.35	-1.8
2,686,779	+		EFB2_02550	0.38	+0.1
2,686,780	-		EFB2_02550	0.38	-0.7
2,686,780	-		EFB2_02550	0.38	-0.1
2,686,804	+		EFB2_02550	0.42	-1.7
2,686,804	+		EFB2_02550	0.42	+0.4
2,686,804	+		EFB2_02550	0.42	+1.3
2,686,804	+		EFB2_02550	0.42	-1.5
2,686,804	+		EFB2_02550	0.42	-1.5
2,686,804	+		EFB2_02550	0.42	-1.1
2,686,804	+		EFB2_02550	0.42	-1.0
2,686,805	-		EFB2_02550	0.42	-1.7
2,686,805	-		EFB2_02550	0.42	-0.5
2,686,805	-		EFB2_02550	0.42	-2.6
2,686,805	-		EFB2_02550	0.42	+0.4
2,686,805	-		EFB2_02550	0.42	-0.4
2,686,805	-		EFB2_02550	0.42	+1.1
2,686,805	-		EFB2_02550	0.42	-1.7
2,686,808	+		EFB2_02550	0.42	-1.1
2,686,808	+		EFB2_02550	0.42	-3.0
2,686,808	+		EFB2_02550	0.42	-0.0
2,686,808	+		EFB2_02550	0.42	-0.4
2,686,808	+		EFB2_02550	0.42	-0.5
2,686,809	-		EFB2_02550	0.42	+1.2
2,686,809	-		EFB2_02550	0.42	-0.8
2,686,809	-		EFB2_02550	0.42	-0.6
2,686,841	-		EFB2_02550	0.47	+0.3
2,686,841	-		EFB2_02550	0.47	+0.4
2,686,870	+		EFB2_02550	0.51	+1.0
2,686,871	-		EFB2_02550	0.52	+0.2
2,686,906	+		EFB2_02550	0.57	+0.2
2,686,906	+		EFB2_02550	0.57	+1.1
2,686,906	+		EFB2_02550	0.57	-0.1
2,686,906	+		EFB2_02550	0.57	-1.0
2,686,906	+		EFB2_02550	0.57	-2.4
2,686,906	+		EFB2_02550	0.57	+0.6
2,686,907	-		EFB2_02550	0.57	+0.4
2,686,907	-		EFB2_02550	0.57	+0.6
2,686,907	-		EFB2_02550	0.57	+0.9
2,686,907	-		EFB2_02550	0.57	+0.4
2,686,907	-		EFB2_02550	0.57	+1.6
2,686,908	+		EFB2_02550	0.57	+0.9
2,686,908	+		EFB2_02550	0.57	-0.9
2,686,908	+		EFB2_02550	0.57	-1.5
2,686,908	+		EFB2_02550	0.57	-0.7
2,686,908	+		EFB2_02550	0.57	+0.4
2,686,908	+		EFB2_02550	0.57	+1.1
2,686,908	+		EFB2_02550	0.57	+1.9
2,686,908	+		EFB2_02550	0.57	-0.1
2,686,908	+		EFB2_02550	0.57	-1.1
2,686,909	-		EFB2_02550	0.57	-0.9
2,686,909	-		EFB2_02550	0.57	+2.1
2,686,909	-		EFB2_02550	0.57	+2.1
2,686,909	-		EFB2_02550	0.57	-0.1
2,686,909	-		EFB2_02550	0.57	-1.0
2,686,941	-		EFB2_02550	0.62	+0.6
2,686,941	-		EFB2_02550	0.62	+0.6
2,686,948	+		EFB2_02550	0.63	-1.0
2,686,948	+		EFB2_02550	0.63	+2.6
2,686,949	-		EFB2_02550	0.63	+0.7
2,686,949	-		EFB2_02550	0.63	+0.6
2,686,949	-		EFB2_02550	0.63	+1.2
2,686,971	+		EFB2_02550	0.67	+0.1
2,686,971	+		EFB2_02550	0.67	+1.6
2,686,971	+		EFB2_02550	0.67	-0.9
2,686,971	+		EFB2_02550	0.67	-0.8
2,686,971	+		EFB2_02550	0.67	+0.9
2,686,971	+		EFB2_02550	0.67	+0.3
2,686,971	+		EFB2_02550	0.67	+2.3
2,686,971	+		EFB2_02550	0.67	-2.3
2,686,972	-		EFB2_02550	0.67	-1.3
2,686,972	-		EFB2_02550	0.67	+1.3
2,686,972	-		EFB2_02550	0.67	-0.9
2,686,972	-		EFB2_02550	0.67	+0.9
2,686,972	-		EFB2_02550	0.67	-0.1
2,686,972	-		EFB2_02550	0.67	+1.1
2,686,972	-		EFB2_02550	0.67	-0.4
2,686,972	-		EFB2_02550	0.67	+0.1
2,686,972	-		EFB2_02550	0.67	-2.1
2,687,001	+		EFB2_02550	0.71	+1.1
2,687,001	+		EFB2_02550	0.71	-1.4
2,687,002	-		EFB2_02550	0.71	-0.7
2,687,027	+		EFB2_02550	0.75	+2.6
2,687,028	-		EFB2_02550	0.75	+0.7
2,687,028	-		EFB2_02550	0.75	-2.1
2,687,036	+		EFB2_02550	0.76	+0.4
2,687,037	-		EFB2_02550	0.76	-0.6
2,687,037	-		EFB2_02550	0.76	+0.1
2,687,037	-		EFB2_02550	0.76	-0.8
2,687,047	+		EFB2_02550	0.78	-1.1
2,687,047	+		EFB2_02550	0.78	+2.4
2,687,047	+		EFB2_02550	0.78	+0.4
2,687,048	-		EFB2_02550	0.78	+0.0
2,687,083	-		EFB2_02550	0.83	+0.1
2,687,083	-		EFB2_02550	0.83	+0.5
2,687,083	-		EFB2_02550	0.83	-0.9
2,687,083	-		EFB2_02550	0.83	-1.5
2,687,103	+		EFB2_02550	0.86	+0.8
2,687,104	-		EFB2_02550	0.86	+2.9
2,687,126	-		EFB2_02550	0.90	+0.7
2,687,159	+				-0.5
2,687,188	+				+0.6
2,687,188	+				+1.1
2,687,189	-				-0.4
2,687,189	-				-1.4
2,687,189	-				+1.7
2,687,198	+				-0.6
2,687,198	+				-1.1
2,687,215	+				-1.9
2,687,215	+				-1.6
2,687,215	+				-0.7
2,687,215	+				+0.1
2,687,215	+				-0.3
2,687,215	+				+2.0
2,687,215	+				+2.4
2,687,216	-				-0.3
2,687,216	-				-0.7
2,687,216	-				-2.2
2,687,216	-				+1.3
2,687,216	-				+0.9
2,687,217	+				-0.4
2,687,220	+				+0.4
2,687,221	-				-0.2
2,687,228	-				-0.5
2,687,234	+				+0.9
2,687,234	+				-1.7
2,687,235	-				+0.5
2,687,312	+				-1.1
2,687,312	+				-0.5
2,687,312	+				-1.0
2,687,312	+				-2.0
2,687,313	-				+2.1
2,687,313	-				-0.2
2,687,313	-				-2.0
2,687,313	-				+0.9
2,687,313	-				+0.0
2,687,349	+				-0.3
2,687,364	-				+1.7
2,687,368	+				+0.3
2,687,399	+				-1.0
2,687,425	+				+1.6
2,687,449	+				-0.5
2,687,449	+				+0.7
2,687,450	-				-0.9
2,687,450	-				+0.6
2,687,487	+				-2.2
2,687,487	+				-0.0
2,687,488	-				-0.6
2,687,535	+				+3.2
2,687,535	+				+0.2
2,687,536	-				+0.7
2,687,536	-				+2.9
2,687,536	-				-0.1
2,687,536	-				+1.6
2,687,536	-				+0.5
2,687,536	-				+1.0
2,687,538	+				-0.6
2,687,538	+				+0.4
2,687,538	+				-0.9
2,687,538	+				+1.1
2,687,589	-		EFB2_02551	0.15	+1.6
2,687,589	-		EFB2_02551	0.15	+1.2
2,687,589	-		EFB2_02551	0.15	+2.4
2,687,589	-		EFB2_02551	0.15	-0.6
2,687,612	+		EFB2_02551	0.19	-1.7
2,687,616	-		EFB2_02551	0.20	+1.4
2,687,623	+		EFB2_02551	0.21	+0.9
2,687,623	+		EFB2_02551	0.21	-1.1
2,687,623	+		EFB2_02551	0.21	+1.3
2,687,623	+		EFB2_02551	0.21	-2.4
2,687,623	+		EFB2_02551	0.21	-1.0
2,687,623	+		EFB2_02551	0.21	-0.7
2,687,623	+		EFB2_02551	0.21	+1.4
2,687,624	-		EFB2_02551	0.21	-0.1
2,687,661	+		EFB2_02551	0.28	+0.8
2,687,661	+		EFB2_02551	0.28	+0.9
2,687,661	+		EFB2_02551	0.28	-1.6
2,687,662	-		EFB2_02551	0.28	+0.6
2,687,662	-		EFB2_02551	0.28	-1.3
2,687,662	-		EFB2_02551	0.28	-1.1
2,687,705	+		EFB2_02551	0.35	-0.2
2,687,718	+		EFB2_02551	0.37	+1.3
2,687,719	-		EFB2_02551	0.37	+2.4
2,687,719	-		EFB2_02551	0.37	-2.4
2,687,734	-		EFB2_02551	0.40	-2.5
2,687,734	-		EFB2_02551	0.40	+2.1
2,687,734	-		EFB2_02551	0.40	-1.4
2,687,788	-		EFB2_02551	0.49	+0.1
2,687,788	-		EFB2_02551	0.49	+1.8
2,687,788	-		EFB2_02551	0.49	-0.9
2,687,797	-		EFB2_02551	0.51	+1.8
2,687,805	-		EFB2_02551	0.52	+1.4
2,687,827	-		EFB2_02551	0.56	+0.4
2,687,851	+		EFB2_02551	0.60	+1.2
2,687,877	+		EFB2_02551	0.64	+1.2
2,687,877	+		EFB2_02551	0.64	-0.6
2,687,933	+		EFB2_02551	0.73	-0.0
2,687,933	+		EFB2_02551	0.73	-0.4
2,687,933	+		EFB2_02551	0.73	-0.4
2,687,951	+		EFB2_02551	0.76	+0.5
2,687,952	-		EFB2_02551	0.77	+0.3
2,687,962	-		EFB2_02551	0.78	+0.4
2,688,053	+				+2.4
2,688,054	-				+1.9
2,688,054	-				-0.6
2,688,057	+				-0.1
2,688,057	+				-0.4
2,688,058	-				-1.0
2,688,111	+				+2.0
2,688,112	-				+0.8
2,688,167	+				+0.7
2,688,167	+				+1.1
2,688,168	-				-0.3
2,688,168	-				+1.2
2,688,180	+				+2.0
2,688,180	+				-0.6
2,688,181	-				+2.0
2,688,181	-				-0.7
2,688,181	-				+0.4
2,688,189	-		EFB2_02552	0.10	-1.5
2,688,191	+		EFB2_02552	0.10	-1.5