Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_03189

Experiment: L-Proline (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_03187 and MPMX26_03188 are separated by 11 nucleotidesMPMX26_03188 and MPMX26_03189 are separated by 39 nucleotidesMPMX26_03189 and MPMX26_03190 are separated by 65 nucleotidesMPMX26_03190 and MPMX26_03191 overlap by 4 nucleotides MPMX26_03187: MPMX26_03187 - IS3 family transposase ISAba21, at 41,628 to 41,927 _03187 MPMX26_03188: MPMX26_03188 - IS3 family transposase ISAba21, at 41,939 to 42,793 _03188 MPMX26_03189: MPMX26_03189 - hypothetical protein, at 42,833 to 43,072 _03189 MPMX26_03190: MPMX26_03190 - hypothetical protein, at 43,138 to 43,779 _03190 MPMX26_03191: MPMX26_03191 - Type IV secretion system protein virB4, at 43,776 to 46,487 _03191 Position (kb) 42 43 44Strain fitness (log2 ratio) -2 -1 0 1 2at 42.831 kb on + strandat 42.831 kb on + strandat 42.877 kb on - strand, within MPMX26_03189at 42.893 kb on - strand, within MPMX26_03189at 42.894 kb on + strand, within MPMX26_03189at 42.894 kb on + strand, within MPMX26_03189at 42.896 kb on + strand, within MPMX26_03189at 42.899 kb on + strand, within MPMX26_03189at 42.902 kb on - strand, within MPMX26_03189at 42.902 kb on - strand, within MPMX26_03189at 42.902 kb on - strand, within MPMX26_03189at 42.902 kb on - strand, within MPMX26_03189at 42.902 kb on - strand, within MPMX26_03189at 42.902 kb on - strand, within MPMX26_03189at 42.902 kb on - strand, within MPMX26_03189at 42.906 kb on + strand, within MPMX26_03189at 42.914 kb on - strand, within MPMX26_03189at 42.919 kb on - strand, within MPMX26_03189at 42.919 kb on - strand, within MPMX26_03189at 42.919 kb on - strand, within MPMX26_03189at 42.931 kb on - strand, within MPMX26_03189at 42.956 kb on - strand, within MPMX26_03189at 42.956 kb on - strand, within MPMX26_03189at 42.956 kb on - strand, within MPMX26_03189at 42.956 kb on - strand, within MPMX26_03189at 42.956 kb on - strand, within MPMX26_03189at 42.956 kb on - strand, within MPMX26_03189at 42.956 kb on - strand, within MPMX26_03189at 42.956 kb on - strand, within MPMX26_03189at 42.956 kb on - strand, within MPMX26_03189at 42.956 kb on - strand, within MPMX26_03189at 42.956 kb on - strand, within MPMX26_03189at 42.956 kb on - strand, within MPMX26_03189at 42.956 kb on - strand, within MPMX26_03189at 42.956 kb on - strand, within MPMX26_03189at 42.956 kb on - strand, within MPMX26_03189at 42.956 kb on - strand, within MPMX26_03189at 42.956 kb on - strand, within MPMX26_03189at 42.961 kb on - strand, within MPMX26_03189at 42.963 kb on - strand, within MPMX26_03189at 42.963 kb on - strand, within MPMX26_03189at 42.975 kb on - strand, within MPMX26_03189at 42.985 kb on - strand, within MPMX26_03189at 42.985 kb on - strand, within MPMX26_03189at 42.985 kb on - strand, within MPMX26_03189at 42.985 kb on - strand, within MPMX26_03189at 42.998 kb on - strand, within MPMX26_03189at 42.998 kb on - strand, within MPMX26_03189at 42.998 kb on - strand, within MPMX26_03189at 42.998 kb on - strand, within MPMX26_03189at 42.998 kb on - strand, within MPMX26_03189at 42.998 kb on - strand, within MPMX26_03189at 42.998 kb on - strand, within MPMX26_03189at 42.998 kb on - strand, within MPMX26_03189at 42.998 kb on - strand, within MPMX26_03189at 42.998 kb on - strand, within MPMX26_03189at 42.998 kb on - strand, within MPMX26_03189at 42.998 kb on - strand, within MPMX26_03189at 42.998 kb on - strand, within MPMX26_03189at 42.998 kb on - strand, within MPMX26_03189at 42.998 kb on - strand, within MPMX26_03189at 43.009 kb on - strand, within MPMX26_03189at 43.031 kb on - strand, within MPMX26_03189at 43.031 kb on - strand, within MPMX26_03189at 43.031 kb on - strand, within MPMX26_03189at 43.031 kb on - strand, within MPMX26_03189at 43.031 kb on - strand, within MPMX26_03189at 43.031 kb on - strand, within MPMX26_03189at 43.031 kb on - strand, within MPMX26_03189at 43.031 kb on - strand, within MPMX26_03189at 43.031 kb on - strand, within MPMX26_03189at 43.116 kb on - strandat 43.116 kb on - strandat 43.123 kb on - strandat 43.182 kb on - strandat 43.182 kb on - strandat 43.182 kb on - strandat 43.182 kb on - strandat 43.182 kb on - strandat 43.187 kb on - strandat 43.218 kb on - strand, within MPMX26_03190at 43.235 kb on - strand, within MPMX26_03190at 43.235 kb on - strand, within MPMX26_03190at 43.235 kb on - strand, within MPMX26_03190at 43.255 kb on - strand, within MPMX26_03190at 43.255 kb on - strand, within MPMX26_03190at 43.255 kb on - strand, within MPMX26_03190at 43.255 kb on - strand, within MPMX26_03190at 43.255 kb on - strand, within MPMX26_03190at 43.255 kb on - strand, within MPMX26_03190at 43.255 kb on - strand, within MPMX26_03190at 43.255 kb on - strand, within MPMX26_03190at 43.255 kb on - strand, within MPMX26_03190at 43.255 kb on - strand, within MPMX26_03190at 43.255 kb on - strand, within MPMX26_03190at 43.255 kb on - strand, within MPMX26_03190at 43.255 kb on - strand, within MPMX26_03190at 43.255 kb on - strand, within MPMX26_03190at 43.255 kb on - strand, within MPMX26_03190at 43.255 kb on - strand, within MPMX26_03190at 43.255 kb on - strand, within MPMX26_03190at 43.255 kb on - strand, within MPMX26_03190at 43.255 kb on - strand, within MPMX26_03190at 43.260 kb on - strand, within MPMX26_03190at 43.282 kb on + strand, within MPMX26_03190at 43.284 kb on - strand, within MPMX26_03190at 43.284 kb on - strand, within MPMX26_03190at 43.290 kb on - strand, within MPMX26_03190at 43.290 kb on - strand, within MPMX26_03190at 43.290 kb on - strand, within MPMX26_03190at 43.290 kb on - strand, within MPMX26_03190at 43.290 kb on - strand, within MPMX26_03190at 43.290 kb on - strand, within MPMX26_03190at 43.290 kb on - strand, within MPMX26_03190at 43.290 kb on - strand, within MPMX26_03190at 43.300 kb on - strand, within MPMX26_03190at 43.300 kb on - strand, within MPMX26_03190at 43.339 kb on - strand, within MPMX26_03190at 43.339 kb on - strand, within MPMX26_03190at 43.339 kb on - strand, within MPMX26_03190at 43.339 kb on - strand, within MPMX26_03190at 43.346 kb on - strand, within MPMX26_03190at 43.362 kb on - strand, within MPMX26_03190at 43.381 kb on - strand, within MPMX26_03190at 43.403 kb on + strand, within MPMX26_03190at 43.411 kb on - strand, within MPMX26_03190at 43.411 kb on - strand, within MPMX26_03190at 43.411 kb on - strand, within MPMX26_03190at 43.412 kb on - strand, within MPMX26_03190at 43.412 kb on - strand, within MPMX26_03190at 43.412 kb on - strand, within MPMX26_03190at 43.428 kb on - strand, within MPMX26_03190at 43.428 kb on - strand, within MPMX26_03190at 43.433 kb on - strand, within MPMX26_03190at 43.459 kb on + strand, within MPMX26_03190at 43.471 kb on - strand, within MPMX26_03190at 43.474 kb on - strand, within MPMX26_03190at 43.474 kb on - strand, within MPMX26_03190at 43.474 kb on - strand, within MPMX26_03190at 43.474 kb on - strand, within MPMX26_03190at 43.476 kb on - strand, within MPMX26_03190at 43.476 kb on - strand, within MPMX26_03190at 43.476 kb on - strand, within MPMX26_03190at 43.509 kb on - strand, within MPMX26_03190at 43.509 kb on - strand, within MPMX26_03190at 43.516 kb on - strand, within MPMX26_03190at 43.548 kb on - strand, within MPMX26_03190at 43.566 kb on - strand, within MPMX26_03190at 43.570 kb on - strand, within MPMX26_03190at 43.578 kb on - strand, within MPMX26_03190at 43.593 kb on - strand, within MPMX26_03190at 43.593 kb on - strand, within MPMX26_03190at 43.593 kb on - strand, within MPMX26_03190at 43.595 kb on + strand, within MPMX26_03190at 43.595 kb on + strand, within MPMX26_03190at 43.603 kb on - strand, within MPMX26_03190at 43.603 kb on - strand, within MPMX26_03190at 43.647 kb on - strand, within MPMX26_03190at 43.649 kb on - strand, within MPMX26_03190at 43.710 kb on - strand, within MPMX26_03190at 43.711 kb on - strand, within MPMX26_03190at 43.711 kb on - strand, within MPMX26_03190at 43.711 kb on - strand, within MPMX26_03190at 43.711 kb on - strand, within MPMX26_03190at 43.711 kb on - strand, within MPMX26_03190at 43.711 kb on - strand, within MPMX26_03190at 43.711 kb on - strand, within MPMX26_03190at 43.711 kb on - strand, within MPMX26_03190at 43.711 kb on - strand, within MPMX26_03190at 43.711 kb on - strand, within MPMX26_03190at 43.717 kb on - strandat 43.717 kb on - strandat 43.717 kb on - strandat 43.717 kb on - strandat 43.732 kb on - strandat 43.732 kb on - strandat 43.737 kb on - strandat 43.740 kb on - strandat 43.740 kb on - strandat 43.811 kb on + strandat 43.816 kb on - strandat 43.852 kb on - strandat 43.871 kb on - strandat 43.874 kb on - strandat 43.964 kb on + strandat 44.024 kb on - strandat 44.041 kb on + strandat 44.049 kb on - strand, within MPMX26_03191at 44.049 kb on - strand, within MPMX26_03191at 44.049 kb on - strand, within MPMX26_03191at 44.049 kb on - strand, within MPMX26_03191at 44.049 kb on - strand, within MPMX26_03191at 44.049 kb on - strand, within MPMX26_03191at 44.064 kb on - strand, within MPMX26_03191at 44.070 kb on - strand, within MPMX26_03191

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline (N)
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42,831 + -0.7
42,831 + +0.9
42,877 - MPMX26_03189 0.18 +0.4
42,893 - MPMX26_03189 0.25 +0.1
42,894 + MPMX26_03189 0.25 -0.5
42,894 + MPMX26_03189 0.25 +1.1
42,896 + MPMX26_03189 0.26 +0.4
42,899 + MPMX26_03189 0.28 -1.1
42,902 - MPMX26_03189 0.29 +0.5
42,902 - MPMX26_03189 0.29 -0.3
42,902 - MPMX26_03189 0.29 -0.1
42,902 - MPMX26_03189 0.29 -0.2
42,902 - MPMX26_03189 0.29 +0.1
42,902 - MPMX26_03189 0.29 +0.6
42,902 - MPMX26_03189 0.29 +0.3
42,906 + MPMX26_03189 0.30 +0.1
42,914 - MPMX26_03189 0.34 -0.0
42,919 - MPMX26_03189 0.36 +1.4
42,919 - MPMX26_03189 0.36 +1.3
42,919 - MPMX26_03189 0.36 +0.4
42,931 - MPMX26_03189 0.41 +0.8
42,956 - MPMX26_03189 0.51 +0.3
42,956 - MPMX26_03189 0.51 +0.3
42,956 - MPMX26_03189 0.51 +0.8
42,956 - MPMX26_03189 0.51 -0.0
42,956 - MPMX26_03189 0.51 -0.1
42,956 - MPMX26_03189 0.51 +0.1
42,956 - MPMX26_03189 0.51 +0.7
42,956 - MPMX26_03189 0.51 -0.2
42,956 - MPMX26_03189 0.51 +1.0
42,956 - MPMX26_03189 0.51 +0.1
42,956 - MPMX26_03189 0.51 -0.5
42,956 - MPMX26_03189 0.51 -0.0
42,956 - MPMX26_03189 0.51 +0.1
42,956 - MPMX26_03189 0.51 -0.1
42,956 - MPMX26_03189 0.51 +0.1
42,956 - MPMX26_03189 0.51 +0.5
42,956 - MPMX26_03189 0.51 +0.3
42,961 - MPMX26_03189 0.53 +0.4
42,963 - MPMX26_03189 0.54 +0.2
42,963 - MPMX26_03189 0.54 +2.1
42,975 - MPMX26_03189 0.59 -0.4
42,985 - MPMX26_03189 0.63 -0.7
42,985 - MPMX26_03189 0.63 -0.1
42,985 - MPMX26_03189 0.63 -0.2
42,985 - MPMX26_03189 0.63 -0.7
42,998 - MPMX26_03189 0.69 +0.0
42,998 - MPMX26_03189 0.69 +0.0
42,998 - MPMX26_03189 0.69 -0.1
42,998 - MPMX26_03189 0.69 -0.3
42,998 - MPMX26_03189 0.69 -0.7
42,998 - MPMX26_03189 0.69 +0.3
42,998 - MPMX26_03189 0.69 -1.0
42,998 - MPMX26_03189 0.69 +0.3
42,998 - MPMX26_03189 0.69 +0.8
42,998 - MPMX26_03189 0.69 +0.1
42,998 - MPMX26_03189 0.69 +0.4
42,998 - MPMX26_03189 0.69 +0.0
42,998 - MPMX26_03189 0.69 +0.4
42,998 - MPMX26_03189 0.69 +0.1
42,998 - MPMX26_03189 0.69 +0.0
43,009 - MPMX26_03189 0.73 +0.6
43,031 - MPMX26_03189 0.82 +0.3
43,031 - MPMX26_03189 0.82 +0.3
43,031 - MPMX26_03189 0.82 +0.3
43,031 - MPMX26_03189 0.82 +0.4
43,031 - MPMX26_03189 0.82 -0.1
43,031 - MPMX26_03189 0.82 +1.1
43,031 - MPMX26_03189 0.82 -0.1
43,031 - MPMX26_03189 0.82 -0.3
43,031 - MPMX26_03189 0.82 -0.1
43,116 - +0.7
43,116 - -0.5
43,123 - -0.2
43,182 - -0.2
43,182 - -0.2
43,182 - -0.1
43,182 - +0.3
43,182 - +0.4
43,187 - -0.4
43,218 - MPMX26_03190 0.12 -0.3
43,235 - MPMX26_03190 0.15 +0.7
43,235 - MPMX26_03190 0.15 -0.9
43,235 - MPMX26_03190 0.15 -0.4
43,255 - MPMX26_03190 0.18 -0.0
43,255 - MPMX26_03190 0.18 +0.1
43,255 - MPMX26_03190 0.18 -0.3
43,255 - MPMX26_03190 0.18 -0.2
43,255 - MPMX26_03190 0.18 +0.1
43,255 - MPMX26_03190 0.18 +0.2
43,255 - MPMX26_03190 0.18 +0.3
43,255 - MPMX26_03190 0.18 +0.3
43,255 - MPMX26_03190 0.18 -0.0
43,255 - MPMX26_03190 0.18 -0.6
43,255 - MPMX26_03190 0.18 -0.1
43,255 - MPMX26_03190 0.18 +0.3
43,255 - MPMX26_03190 0.18 +0.7
43,255 - MPMX26_03190 0.18 -0.0
43,255 - MPMX26_03190 0.18 +0.4
43,255 - MPMX26_03190 0.18 +0.2
43,255 - MPMX26_03190 0.18 +0.4
43,255 - MPMX26_03190 0.18 +0.0
43,255 - MPMX26_03190 0.18 +0.2
43,260 - MPMX26_03190 0.19 +0.0
43,282 + MPMX26_03190 0.22 -0.3
43,284 - MPMX26_03190 0.23 -0.1
43,284 - MPMX26_03190 0.23 +0.3
43,290 - MPMX26_03190 0.24 +0.3
43,290 - MPMX26_03190 0.24 -0.2
43,290 - MPMX26_03190 0.24 -0.6
43,290 - MPMX26_03190 0.24 +0.4
43,290 - MPMX26_03190 0.24 +0.9
43,290 - MPMX26_03190 0.24 +0.4
43,290 - MPMX26_03190 0.24 +0.3
43,290 - MPMX26_03190 0.24 +0.5
43,300 - MPMX26_03190 0.25 -0.3
43,300 - MPMX26_03190 0.25 +0.2
43,339 - MPMX26_03190 0.31 +0.2
43,339 - MPMX26_03190 0.31 +1.0
43,339 - MPMX26_03190 0.31 -0.5
43,339 - MPMX26_03190 0.31 +0.0
43,346 - MPMX26_03190 0.32 +0.3
43,362 - MPMX26_03190 0.35 -0.1
43,381 - MPMX26_03190 0.38 +0.3
43,403 + MPMX26_03190 0.41 +0.9
43,411 - MPMX26_03190 0.43 +0.1
43,411 - MPMX26_03190 0.43 -0.2
43,411 - MPMX26_03190 0.43 -0.5
43,412 - MPMX26_03190 0.43 -0.1
43,412 - MPMX26_03190 0.43 +0.5
43,412 - MPMX26_03190 0.43 +0.2
43,428 - MPMX26_03190 0.45 -0.3
43,428 - MPMX26_03190 0.45 -0.2
43,433 - MPMX26_03190 0.46 +0.1
43,459 + MPMX26_03190 0.50 -0.5
43,471 - MPMX26_03190 0.52 -0.4
43,474 - MPMX26_03190 0.52 +1.0
43,474 - MPMX26_03190 0.52 +0.4
43,474 - MPMX26_03190 0.52 +0.1
43,474 - MPMX26_03190 0.52 -0.7
43,476 - MPMX26_03190 0.53 -0.4
43,476 - MPMX26_03190 0.53 -0.1
43,476 - MPMX26_03190 0.53 +0.1
43,509 - MPMX26_03190 0.58 -0.7
43,509 - MPMX26_03190 0.58 +0.9
43,516 - MPMX26_03190 0.59 -0.0
43,548 - MPMX26_03190 0.64 -0.2
43,566 - MPMX26_03190 0.67 -0.6
43,570 - MPMX26_03190 0.67 -0.2
43,578 - MPMX26_03190 0.69 -0.7
43,593 - MPMX26_03190 0.71 +0.2
43,593 - MPMX26_03190 0.71 +0.3
43,593 - MPMX26_03190 0.71 -0.1
43,595 + MPMX26_03190 0.71 -0.2
43,595 + MPMX26_03190 0.71 -0.4
43,603 - MPMX26_03190 0.72 +0.3
43,603 - MPMX26_03190 0.72 +0.5
43,647 - MPMX26_03190 0.79 +1.6
43,649 - MPMX26_03190 0.80 +0.3
43,710 - MPMX26_03190 0.89 +0.1
43,711 - MPMX26_03190 0.89 -0.0
43,711 - MPMX26_03190 0.89 +0.6
43,711 - MPMX26_03190 0.89 +0.8
43,711 - MPMX26_03190 0.89 +0.0
43,711 - MPMX26_03190 0.89 -0.4
43,711 - MPMX26_03190 0.89 +0.2
43,711 - MPMX26_03190 0.89 +0.0
43,711 - MPMX26_03190 0.89 +0.4
43,711 - MPMX26_03190 0.89 -1.0
43,711 - MPMX26_03190 0.89 -0.2
43,717 - -0.1
43,717 - -0.0
43,717 - +0.0
43,717 - -0.6
43,732 - +0.1
43,732 - +0.3
43,737 - +0.7
43,740 - -0.0
43,740 - +0.3
43,811 + -1.9
43,816 - +0.3
43,852 - +0.8
43,871 - -0.5
43,874 - +0.2
43,964 + -0.7
44,024 - -0.5
44,041 + +0.0
44,049 - MPMX26_03191 0.10 -0.1
44,049 - MPMX26_03191 0.10 +0.7
44,049 - MPMX26_03191 0.10 +0.5
44,049 - MPMX26_03191 0.10 -1.5
44,049 - MPMX26_03191 0.10 +2.3
44,049 - MPMX26_03191 0.10 +0.1
44,064 - MPMX26_03191 0.11 +0.1
44,070 - MPMX26_03191 0.11 -0.2

Or see this region's nucleotide sequence