Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_03125

Experiment: L-Proline (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_03124 and MPMX26_03125 are separated by 625 nucleotidesMPMX26_03125 and MPMX26_03126 are separated by 856 nucleotides MPMX26_03124: MPMX26_03124 - hypothetical protein, at 37,048 to 37,242 _03124 MPMX26_03125: MPMX26_03125 - Thiol:disulfide interchange protein DsbA, at 37,868 to 38,482 _03125 MPMX26_03126: MPMX26_03126 - DNA-invertase hin, at 39,339 to 39,905 _03126 Position (kb) 37 38 39Strain fitness (log2 ratio) -1 0 1at 37.071 kb on + strand, within MPMX26_03124at 37.188 kb on + strand, within MPMX26_03124at 37.205 kb on + strand, within MPMX26_03124at 37.207 kb on + strand, within MPMX26_03124at 37.231 kb on + strandat 37.495 kb on + strandat 37.934 kb on - strand, within MPMX26_03125at 37.934 kb on - strand, within MPMX26_03125at 37.934 kb on - strand, within MPMX26_03125at 37.934 kb on - strand, within MPMX26_03125at 37.934 kb on - strand, within MPMX26_03125at 37.934 kb on - strand, within MPMX26_03125at 37.934 kb on - strand, within MPMX26_03125at 37.934 kb on - strand, within MPMX26_03125at 37.944 kb on - strand, within MPMX26_03125at 37.982 kb on - strand, within MPMX26_03125at 37.982 kb on - strand, within MPMX26_03125at 37.982 kb on - strand, within MPMX26_03125at 37.982 kb on - strand, within MPMX26_03125at 37.982 kb on - strand, within MPMX26_03125at 37.993 kb on - strand, within MPMX26_03125at 38.090 kb on - strand, within MPMX26_03125at 38.090 kb on - strand, within MPMX26_03125at 38.090 kb on - strand, within MPMX26_03125at 38.090 kb on - strand, within MPMX26_03125at 38.090 kb on - strand, within MPMX26_03125at 38.090 kb on - strand, within MPMX26_03125at 38.090 kb on - strand, within MPMX26_03125at 38.182 kb on - strand, within MPMX26_03125at 38.189 kb on - strand, within MPMX26_03125at 38.221 kb on - strand, within MPMX26_03125at 38.227 kb on - strand, within MPMX26_03125at 38.290 kb on - strand, within MPMX26_03125at 38.290 kb on - strand, within MPMX26_03125at 38.290 kb on - strand, within MPMX26_03125at 38.290 kb on - strand, within MPMX26_03125at 38.290 kb on - strand, within MPMX26_03125at 38.293 kb on - strand, within MPMX26_03125at 38.293 kb on - strand, within MPMX26_03125at 38.317 kb on - strand, within MPMX26_03125at 38.322 kb on - strand, within MPMX26_03125at 38.322 kb on - strand, within MPMX26_03125at 38.352 kb on - strand, within MPMX26_03125at 38.352 kb on - strand, within MPMX26_03125at 38.352 kb on - strand, within MPMX26_03125at 38.391 kb on + strand, within MPMX26_03125at 38.404 kb on - strand, within MPMX26_03125at 38.404 kb on - strand, within MPMX26_03125at 38.404 kb on - strand, within MPMX26_03125at 38.404 kb on - strand, within MPMX26_03125at 38.420 kb on - strand, within MPMX26_03125at 38.446 kb on - strandat 38.446 kb on - strandat 38.446 kb on - strandat 38.515 kb on + strandat 38.523 kb on - strandat 38.523 kb on - strandat 38.523 kb on - strandat 38.523 kb on - strandat 38.523 kb on - strandat 38.523 kb on - strandat 38.523 kb on - strandat 38.528 kb on - strandat 38.598 kb on - strandat 38.802 kb on - strandat 39.417 kb on + strand, within MPMX26_03126at 39.435 kb on + strand, within MPMX26_03126at 39.448 kb on + strand, within MPMX26_03126

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline (N)
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37,071 + MPMX26_03124 0.12 +0.1
37,188 + MPMX26_03124 0.72 +0.5
37,205 + MPMX26_03124 0.81 +0.1
37,207 + MPMX26_03124 0.82 -0.1
37,231 + +0.3
37,495 + +1.3
37,934 - MPMX26_03125 0.11 -0.7
37,934 - MPMX26_03125 0.11 +0.3
37,934 - MPMX26_03125 0.11 -0.0
37,934 - MPMX26_03125 0.11 -0.6
37,934 - MPMX26_03125 0.11 -0.9
37,934 - MPMX26_03125 0.11 -0.1
37,934 - MPMX26_03125 0.11 +0.1
37,934 - MPMX26_03125 0.11 -0.4
37,944 - MPMX26_03125 0.12 -0.3
37,982 - MPMX26_03125 0.19 +0.5
37,982 - MPMX26_03125 0.19 -0.1
37,982 - MPMX26_03125 0.19 -0.2
37,982 - MPMX26_03125 0.19 +0.1
37,982 - MPMX26_03125 0.19 -0.1
37,993 - MPMX26_03125 0.20 +0.1
38,090 - MPMX26_03125 0.36 +0.2
38,090 - MPMX26_03125 0.36 -0.7
38,090 - MPMX26_03125 0.36 +0.1
38,090 - MPMX26_03125 0.36 +0.7
38,090 - MPMX26_03125 0.36 +0.5
38,090 - MPMX26_03125 0.36 +0.1
38,090 - MPMX26_03125 0.36 -0.1
38,182 - MPMX26_03125 0.51 -0.2
38,189 - MPMX26_03125 0.52 -0.5
38,221 - MPMX26_03125 0.57 +0.0
38,227 - MPMX26_03125 0.58 -0.1
38,290 - MPMX26_03125 0.69 -0.5
38,290 - MPMX26_03125 0.69 -0.5
38,290 - MPMX26_03125 0.69 +0.1
38,290 - MPMX26_03125 0.69 -0.7
38,290 - MPMX26_03125 0.69 -0.5
38,293 - MPMX26_03125 0.69 +0.6
38,293 - MPMX26_03125 0.69 +0.0
38,317 - MPMX26_03125 0.73 +0.6
38,322 - MPMX26_03125 0.74 +0.1
38,322 - MPMX26_03125 0.74 +0.0
38,352 - MPMX26_03125 0.79 -0.0
38,352 - MPMX26_03125 0.79 -0.0
38,352 - MPMX26_03125 0.79 +1.1
38,391 + MPMX26_03125 0.85 +0.7
38,404 - MPMX26_03125 0.87 +0.0
38,404 - MPMX26_03125 0.87 +0.4
38,404 - MPMX26_03125 0.87 +0.1
38,404 - MPMX26_03125 0.87 +0.4
38,420 - MPMX26_03125 0.90 +0.6
38,446 - +0.3
38,446 - -0.1
38,446 - +0.2
38,515 + +0.3
38,523 - +0.3
38,523 - -0.0
38,523 - +1.4
38,523 - -0.1
38,523 - +0.7
38,523 - -0.0
38,523 - +0.2
38,528 - -0.8
38,598 - -0.0
38,802 - +1.4
39,417 + MPMX26_03126 0.14 -0.0
39,435 + MPMX26_03126 0.17 -0.1
39,448 + MPMX26_03126 0.19 -0.4

Or see this region's nucleotide sequence