Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_03049

Experiment: L-Proline (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_03047 and MPMX26_03048 are separated by 165 nucleotidesMPMX26_03048 and MPMX26_03049 are separated by 64 nucleotidesMPMX26_03049 and MPMX26_03050 are separated by 676 nucleotides MPMX26_03047: MPMX26_03047 - Chaperone protein DnaK, at 3,166,466 to 3,168,412 _03047 MPMX26_03048: MPMX26_03048 - hypothetical protein, at 3,168,578 to 3,168,973 _03048 MPMX26_03049: MPMX26_03049 - Tn3 family transposase TnXax1, at 3,169,038 to 3,170,321 _03049 MPMX26_03050: MPMX26_03050 - N5-carboxyaminoimidazole ribonucleotide synthase, at 3,170,998 to 3,172,119 _03050 Position (kb) 3169 3170 3171Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 3168.093 kb on + strand, within MPMX26_03047at 3168.210 kb on + strand, within MPMX26_03047at 3168.285 kb on + strandat 3168.294 kb on + strandat 3168.306 kb on + strandat 3168.306 kb on + strandat 3168.306 kb on + strandat 3168.306 kb on + strandat 3168.306 kb on + strandat 3168.608 kb on - strandat 3168.628 kb on + strand, within MPMX26_03048at 3168.664 kb on + strand, within MPMX26_03048at 3168.677 kb on + strand, within MPMX26_03048at 3168.679 kb on + strand, within MPMX26_03048at 3168.694 kb on + strand, within MPMX26_03048at 3168.696 kb on + strand, within MPMX26_03048at 3168.701 kb on + strand, within MPMX26_03048at 3168.701 kb on + strand, within MPMX26_03048at 3168.701 kb on + strand, within MPMX26_03048at 3168.709 kb on - strand, within MPMX26_03048at 3168.801 kb on + strand, within MPMX26_03048at 3168.811 kb on + strand, within MPMX26_03048at 3168.902 kb on + strand, within MPMX26_03048at 3168.940 kb on + strandat 3168.940 kb on + strandat 3169.163 kb on - strandat 3169.179 kb on - strand, within MPMX26_03049at 3169.179 kb on - strand, within MPMX26_03049at 3169.242 kb on - strand, within MPMX26_03049at 3169.242 kb on - strand, within MPMX26_03049at 3169.304 kb on - strand, within MPMX26_03049at 3169.316 kb on - strand, within MPMX26_03049at 3169.391 kb on - strand, within MPMX26_03049at 3169.391 kb on - strand, within MPMX26_03049at 3169.409 kb on - strand, within MPMX26_03049at 3169.409 kb on - strand, within MPMX26_03049at 3169.409 kb on - strand, within MPMX26_03049at 3169.409 kb on - strand, within MPMX26_03049at 3169.467 kb on - strand, within MPMX26_03049at 3169.521 kb on - strand, within MPMX26_03049at 3169.523 kb on - strand, within MPMX26_03049at 3169.630 kb on - strand, within MPMX26_03049at 3169.637 kb on - strand, within MPMX26_03049at 3169.638 kb on - strand, within MPMX26_03049at 3169.694 kb on - strand, within MPMX26_03049at 3169.701 kb on - strand, within MPMX26_03049at 3169.740 kb on - strand, within MPMX26_03049at 3169.892 kb on - strand, within MPMX26_03049at 3169.901 kb on - strand, within MPMX26_03049at 3169.934 kb on - strand, within MPMX26_03049at 3169.934 kb on - strand, within MPMX26_03049at 3169.934 kb on - strand, within MPMX26_03049at 3169.934 kb on - strand, within MPMX26_03049at 3169.934 kb on - strand, within MPMX26_03049at 3169.934 kb on - strand, within MPMX26_03049at 3169.935 kb on - strand, within MPMX26_03049at 3169.935 kb on - strand, within MPMX26_03049at 3169.995 kb on - strand, within MPMX26_03049at 3169.995 kb on - strand, within MPMX26_03049at 3170.010 kb on - strand, within MPMX26_03049at 3170.109 kb on - strand, within MPMX26_03049at 3170.109 kb on - strand, within MPMX26_03049at 3170.109 kb on - strand, within MPMX26_03049at 3170.117 kb on - strand, within MPMX26_03049at 3170.117 kb on - strand, within MPMX26_03049at 3170.124 kb on - strand, within MPMX26_03049at 3170.141 kb on - strand, within MPMX26_03049at 3170.145 kb on - strand, within MPMX26_03049at 3170.145 kb on - strand, within MPMX26_03049at 3170.145 kb on - strand, within MPMX26_03049at 3170.145 kb on - strand, within MPMX26_03049at 3170.145 kb on - strand, within MPMX26_03049at 3170.145 kb on - strand, within MPMX26_03049at 3170.145 kb on - strand, within MPMX26_03049at 3170.145 kb on - strand, within MPMX26_03049at 3170.145 kb on - strand, within MPMX26_03049at 3170.145 kb on - strand, within MPMX26_03049at 3170.198 kb on - strandat 3170.271 kb on - strandat 3170.321 kb on - strandat 3170.598 kb on - strandat 3170.851 kb on - strandat 3170.997 kb on - strandat 3171.004 kb on - strandat 3171.066 kb on - strandat 3171.158 kb on - strand, within MPMX26_03050at 3171.158 kb on - strand, within MPMX26_03050at 3171.175 kb on - strand, within MPMX26_03050at 3171.206 kb on - strand, within MPMX26_03050at 3171.221 kb on - strand, within MPMX26_03050at 3171.221 kb on - strand, within MPMX26_03050at 3171.224 kb on - strand, within MPMX26_03050at 3171.224 kb on - strand, within MPMX26_03050at 3171.231 kb on - strand, within MPMX26_03050at 3171.239 kb on - strand, within MPMX26_03050at 3171.242 kb on - strand, within MPMX26_03050at 3171.242 kb on - strand, within MPMX26_03050at 3171.242 kb on - strand, within MPMX26_03050at 3171.242 kb on - strand, within MPMX26_03050at 3171.242 kb on - strand, within MPMX26_03050at 3171.242 kb on - strand, within MPMX26_03050at 3171.242 kb on - strand, within MPMX26_03050at 3171.255 kb on - strand, within MPMX26_03050at 3171.255 kb on - strand, within MPMX26_03050at 3171.261 kb on - strand, within MPMX26_03050at 3171.261 kb on - strand, within MPMX26_03050at 3171.261 kb on - strand, within MPMX26_03050at 3171.274 kb on - strand, within MPMX26_03050at 3171.274 kb on - strand, within MPMX26_03050at 3171.290 kb on - strand, within MPMX26_03050at 3171.311 kb on - strand, within MPMX26_03050at 3171.316 kb on - strand, within MPMX26_03050

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline (N)
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3,168,093 + MPMX26_03047 0.84 -2.0
3,168,210 + MPMX26_03047 0.90 -1.1
3,168,285 + -0.4
3,168,294 + -0.8
3,168,306 + -0.8
3,168,306 + -0.7
3,168,306 + -0.6
3,168,306 + -0.9
3,168,306 + -0.7
3,168,608 - -1.4
3,168,628 + MPMX26_03048 0.13 -0.2
3,168,664 + MPMX26_03048 0.22 -0.6
3,168,677 + MPMX26_03048 0.25 -0.5
3,168,679 + MPMX26_03048 0.26 -0.4
3,168,694 + MPMX26_03048 0.29 -0.1
3,168,696 + MPMX26_03048 0.30 -0.6
3,168,701 + MPMX26_03048 0.31 -0.4
3,168,701 + MPMX26_03048 0.31 +0.6
3,168,701 + MPMX26_03048 0.31 +0.7
3,168,709 - MPMX26_03048 0.33 -0.7
3,168,801 + MPMX26_03048 0.56 -1.6
3,168,811 + MPMX26_03048 0.59 +0.1
3,168,902 + MPMX26_03048 0.82 -0.5
3,168,940 + +0.2
3,168,940 + -0.5
3,169,163 - -0.2
3,169,179 - MPMX26_03049 0.11 +0.4
3,169,179 - MPMX26_03049 0.11 +0.7
3,169,242 - MPMX26_03049 0.16 +1.3
3,169,242 - MPMX26_03049 0.16 -0.1
3,169,304 - MPMX26_03049 0.21 -0.8
3,169,316 - MPMX26_03049 0.22 +0.4
3,169,391 - MPMX26_03049 0.27 +0.4
3,169,391 - MPMX26_03049 0.27 +0.6
3,169,409 - MPMX26_03049 0.29 +1.4
3,169,409 - MPMX26_03049 0.29 -0.6
3,169,409 - MPMX26_03049 0.29 +0.1
3,169,409 - MPMX26_03049 0.29 +0.4
3,169,467 - MPMX26_03049 0.33 +0.2
3,169,521 - MPMX26_03049 0.38 -0.1
3,169,523 - MPMX26_03049 0.38 +0.4
3,169,630 - MPMX26_03049 0.46 +0.0
3,169,637 - MPMX26_03049 0.47 -0.2
3,169,638 - MPMX26_03049 0.47 +0.9
3,169,694 - MPMX26_03049 0.51 -1.9
3,169,701 - MPMX26_03049 0.52 +0.0
3,169,740 - MPMX26_03049 0.55 -0.1
3,169,892 - MPMX26_03049 0.67 +0.5
3,169,901 - MPMX26_03049 0.67 -0.8
3,169,934 - MPMX26_03049 0.70 +0.1
3,169,934 - MPMX26_03049 0.70 +0.1
3,169,934 - MPMX26_03049 0.70 +0.5
3,169,934 - MPMX26_03049 0.70 +0.5
3,169,934 - MPMX26_03049 0.70 -0.3
3,169,934 - MPMX26_03049 0.70 +0.5
3,169,935 - MPMX26_03049 0.70 -0.5
3,169,935 - MPMX26_03049 0.70 +0.4
3,169,995 - MPMX26_03049 0.75 -0.4
3,169,995 - MPMX26_03049 0.75 +0.6
3,170,010 - MPMX26_03049 0.76 +0.0
3,170,109 - MPMX26_03049 0.83 +1.0
3,170,109 - MPMX26_03049 0.83 +0.8
3,170,109 - MPMX26_03049 0.83 +0.1
3,170,117 - MPMX26_03049 0.84 +0.0
3,170,117 - MPMX26_03049 0.84 +0.5
3,170,124 - MPMX26_03049 0.85 +0.7
3,170,141 - MPMX26_03049 0.86 -0.6
3,170,145 - MPMX26_03049 0.86 +0.3
3,170,145 - MPMX26_03049 0.86 +0.5
3,170,145 - MPMX26_03049 0.86 -0.2
3,170,145 - MPMX26_03049 0.86 -0.1
3,170,145 - MPMX26_03049 0.86 -0.4
3,170,145 - MPMX26_03049 0.86 -0.1
3,170,145 - MPMX26_03049 0.86 +0.3
3,170,145 - MPMX26_03049 0.86 +0.6
3,170,145 - MPMX26_03049 0.86 +0.5
3,170,145 - MPMX26_03049 0.86 +0.2
3,170,198 - -0.1
3,170,271 - +0.2
3,170,321 - +0.1
3,170,598 - -0.3
3,170,851 - +0.6
3,170,997 - +0.1
3,171,004 - -0.1
3,171,066 - -4.0
3,171,158 - MPMX26_03050 0.14 -5.3
3,171,158 - MPMX26_03050 0.14 -5.5
3,171,175 - MPMX26_03050 0.16 -3.9
3,171,206 - MPMX26_03050 0.19 -2.3
3,171,221 - MPMX26_03050 0.20 -3.4
3,171,221 - MPMX26_03050 0.20 -3.8
3,171,224 - MPMX26_03050 0.20 -4.9
3,171,224 - MPMX26_03050 0.20 -3.9
3,171,231 - MPMX26_03050 0.21 -2.9
3,171,239 - MPMX26_03050 0.21 -4.6
3,171,242 - MPMX26_03050 0.22 -2.4
3,171,242 - MPMX26_03050 0.22 -1.3
3,171,242 - MPMX26_03050 0.22 -2.9
3,171,242 - MPMX26_03050 0.22 -2.5
3,171,242 - MPMX26_03050 0.22 -3.3
3,171,242 - MPMX26_03050 0.22 -3.7
3,171,242 - MPMX26_03050 0.22 -3.8
3,171,255 - MPMX26_03050 0.23 -2.9
3,171,255 - MPMX26_03050 0.23 -2.5
3,171,261 - MPMX26_03050 0.23 -3.6
3,171,261 - MPMX26_03050 0.23 -2.7
3,171,261 - MPMX26_03050 0.23 -1.8
3,171,274 - MPMX26_03050 0.25 -4.6
3,171,274 - MPMX26_03050 0.25 -3.4
3,171,290 - MPMX26_03050 0.26 -3.0
3,171,311 - MPMX26_03050 0.28 -3.9
3,171,316 - MPMX26_03050 0.28 -2.9

Or see this region's nucleotide sequence