Experiment: L-Proline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_03047 and MPMX26_03048 are separated by 165 nucleotides MPMX26_03048 and MPMX26_03049 are separated by 64 nucleotides MPMX26_03049 and MPMX26_03050 are separated by 676 nucleotides
MPMX26_03047: MPMX26_03047 - Chaperone protein DnaK, at 3,166,466 to 3,168,412
_03047
MPMX26_03048: MPMX26_03048 - hypothetical protein, at 3,168,578 to 3,168,973
_03048
MPMX26_03049: MPMX26_03049 - Tn3 family transposase TnXax1, at 3,169,038 to 3,170,321
_03049
MPMX26_03050: MPMX26_03050 - N5-carboxyaminoimidazole ribonucleotide synthase, at 3,170,998 to 3,172,119
_03050
Position (kb)
3169
3170
3171 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 3168.093 kb on + strand, within MPMX26_03047 at 3168.210 kb on + strand, within MPMX26_03047 at 3168.285 kb on + strand at 3168.294 kb on + strand at 3168.306 kb on + strand at 3168.306 kb on + strand at 3168.306 kb on + strand at 3168.306 kb on + strand at 3168.306 kb on + strand at 3168.608 kb on - strand at 3168.628 kb on + strand, within MPMX26_03048 at 3168.664 kb on + strand, within MPMX26_03048 at 3168.677 kb on + strand, within MPMX26_03048 at 3168.679 kb on + strand, within MPMX26_03048 at 3168.694 kb on + strand, within MPMX26_03048 at 3168.696 kb on + strand, within MPMX26_03048 at 3168.701 kb on + strand, within MPMX26_03048 at 3168.701 kb on + strand, within MPMX26_03048 at 3168.701 kb on + strand, within MPMX26_03048 at 3168.709 kb on - strand, within MPMX26_03048 at 3168.801 kb on + strand, within MPMX26_03048 at 3168.811 kb on + strand, within MPMX26_03048 at 3168.902 kb on + strand, within MPMX26_03048 at 3168.940 kb on + strand at 3168.940 kb on + strand at 3169.163 kb on - strand at 3169.179 kb on - strand, within MPMX26_03049 at 3169.179 kb on - strand, within MPMX26_03049 at 3169.242 kb on - strand, within MPMX26_03049 at 3169.242 kb on - strand, within MPMX26_03049 at 3169.304 kb on - strand, within MPMX26_03049 at 3169.316 kb on - strand, within MPMX26_03049 at 3169.391 kb on - strand, within MPMX26_03049 at 3169.391 kb on - strand, within MPMX26_03049 at 3169.409 kb on - strand, within MPMX26_03049 at 3169.409 kb on - strand, within MPMX26_03049 at 3169.409 kb on - strand, within MPMX26_03049 at 3169.409 kb on - strand, within MPMX26_03049 at 3169.467 kb on - strand, within MPMX26_03049 at 3169.521 kb on - strand, within MPMX26_03049 at 3169.523 kb on - strand, within MPMX26_03049 at 3169.630 kb on - strand, within MPMX26_03049 at 3169.637 kb on - strand, within MPMX26_03049 at 3169.638 kb on - strand, within MPMX26_03049 at 3169.694 kb on - strand, within MPMX26_03049 at 3169.701 kb on - strand, within MPMX26_03049 at 3169.740 kb on - strand, within MPMX26_03049 at 3169.892 kb on - strand, within MPMX26_03049 at 3169.901 kb on - strand, within MPMX26_03049 at 3169.934 kb on - strand, within MPMX26_03049 at 3169.934 kb on - strand, within MPMX26_03049 at 3169.934 kb on - strand, within MPMX26_03049 at 3169.934 kb on - strand, within MPMX26_03049 at 3169.934 kb on - strand, within MPMX26_03049 at 3169.934 kb on - strand, within MPMX26_03049 at 3169.935 kb on - strand, within MPMX26_03049 at 3169.935 kb on - strand, within MPMX26_03049 at 3169.995 kb on - strand, within MPMX26_03049 at 3169.995 kb on - strand, within MPMX26_03049 at 3170.010 kb on - strand, within MPMX26_03049 at 3170.109 kb on - strand, within MPMX26_03049 at 3170.109 kb on - strand, within MPMX26_03049 at 3170.109 kb on - strand, within MPMX26_03049 at 3170.117 kb on - strand, within MPMX26_03049 at 3170.117 kb on - strand, within MPMX26_03049 at 3170.124 kb on - strand, within MPMX26_03049 at 3170.141 kb on - strand, within MPMX26_03049 at 3170.145 kb on - strand, within MPMX26_03049 at 3170.145 kb on - strand, within MPMX26_03049 at 3170.145 kb on - strand, within MPMX26_03049 at 3170.145 kb on - strand, within MPMX26_03049 at 3170.145 kb on - strand, within MPMX26_03049 at 3170.145 kb on - strand, within MPMX26_03049 at 3170.145 kb on - strand, within MPMX26_03049 at 3170.145 kb on - strand, within MPMX26_03049 at 3170.145 kb on - strand, within MPMX26_03049 at 3170.145 kb on - strand, within MPMX26_03049 at 3170.198 kb on - strand at 3170.271 kb on - strand at 3170.321 kb on - strand at 3170.598 kb on - strand at 3170.851 kb on - strand at 3170.997 kb on - strand at 3171.004 kb on - strand at 3171.066 kb on - strand at 3171.158 kb on - strand, within MPMX26_03050 at 3171.158 kb on - strand, within MPMX26_03050 at 3171.175 kb on - strand, within MPMX26_03050 at 3171.206 kb on - strand, within MPMX26_03050 at 3171.221 kb on - strand, within MPMX26_03050 at 3171.221 kb on - strand, within MPMX26_03050 at 3171.224 kb on - strand, within MPMX26_03050 at 3171.224 kb on - strand, within MPMX26_03050 at 3171.231 kb on - strand, within MPMX26_03050 at 3171.239 kb on - strand, within MPMX26_03050 at 3171.242 kb on - strand, within MPMX26_03050 at 3171.242 kb on - strand, within MPMX26_03050 at 3171.242 kb on - strand, within MPMX26_03050 at 3171.242 kb on - strand, within MPMX26_03050 at 3171.242 kb on - strand, within MPMX26_03050 at 3171.242 kb on - strand, within MPMX26_03050 at 3171.242 kb on - strand, within MPMX26_03050 at 3171.255 kb on - strand, within MPMX26_03050 at 3171.255 kb on - strand, within MPMX26_03050 at 3171.261 kb on - strand, within MPMX26_03050 at 3171.261 kb on - strand, within MPMX26_03050 at 3171.261 kb on - strand, within MPMX26_03050 at 3171.274 kb on - strand, within MPMX26_03050 at 3171.274 kb on - strand, within MPMX26_03050 at 3171.290 kb on - strand, within MPMX26_03050 at 3171.311 kb on - strand, within MPMX26_03050 at 3171.316 kb on - strand, within MPMX26_03050
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (N) remove 3,168,093 + MPMX26_03047 0.84 -2.0 3,168,210 + MPMX26_03047 0.90 -1.1 3,168,285 + -0.4 3,168,294 + -0.8 3,168,306 + -0.8 3,168,306 + -0.7 3,168,306 + -0.6 3,168,306 + -0.9 3,168,306 + -0.7 3,168,608 - -1.4 3,168,628 + MPMX26_03048 0.13 -0.2 3,168,664 + MPMX26_03048 0.22 -0.6 3,168,677 + MPMX26_03048 0.25 -0.5 3,168,679 + MPMX26_03048 0.26 -0.4 3,168,694 + MPMX26_03048 0.29 -0.1 3,168,696 + MPMX26_03048 0.30 -0.6 3,168,701 + MPMX26_03048 0.31 -0.4 3,168,701 + MPMX26_03048 0.31 +0.6 3,168,701 + MPMX26_03048 0.31 +0.7 3,168,709 - MPMX26_03048 0.33 -0.7 3,168,801 + MPMX26_03048 0.56 -1.6 3,168,811 + MPMX26_03048 0.59 +0.1 3,168,902 + MPMX26_03048 0.82 -0.5 3,168,940 + +0.2 3,168,940 + -0.5 3,169,163 - -0.2 3,169,179 - MPMX26_03049 0.11 +0.4 3,169,179 - MPMX26_03049 0.11 +0.7 3,169,242 - MPMX26_03049 0.16 +1.3 3,169,242 - MPMX26_03049 0.16 -0.1 3,169,304 - MPMX26_03049 0.21 -0.8 3,169,316 - MPMX26_03049 0.22 +0.4 3,169,391 - MPMX26_03049 0.27 +0.4 3,169,391 - MPMX26_03049 0.27 +0.6 3,169,409 - MPMX26_03049 0.29 +1.4 3,169,409 - MPMX26_03049 0.29 -0.6 3,169,409 - MPMX26_03049 0.29 +0.1 3,169,409 - MPMX26_03049 0.29 +0.4 3,169,467 - MPMX26_03049 0.33 +0.2 3,169,521 - MPMX26_03049 0.38 -0.1 3,169,523 - MPMX26_03049 0.38 +0.4 3,169,630 - MPMX26_03049 0.46 +0.0 3,169,637 - MPMX26_03049 0.47 -0.2 3,169,638 - MPMX26_03049 0.47 +0.9 3,169,694 - MPMX26_03049 0.51 -1.9 3,169,701 - MPMX26_03049 0.52 +0.0 3,169,740 - MPMX26_03049 0.55 -0.1 3,169,892 - MPMX26_03049 0.67 +0.5 3,169,901 - MPMX26_03049 0.67 -0.8 3,169,934 - MPMX26_03049 0.70 +0.1 3,169,934 - MPMX26_03049 0.70 +0.1 3,169,934 - MPMX26_03049 0.70 +0.5 3,169,934 - MPMX26_03049 0.70 +0.5 3,169,934 - MPMX26_03049 0.70 -0.3 3,169,934 - MPMX26_03049 0.70 +0.5 3,169,935 - MPMX26_03049 0.70 -0.5 3,169,935 - MPMX26_03049 0.70 +0.4 3,169,995 - MPMX26_03049 0.75 -0.4 3,169,995 - MPMX26_03049 0.75 +0.6 3,170,010 - MPMX26_03049 0.76 +0.0 3,170,109 - MPMX26_03049 0.83 +1.0 3,170,109 - MPMX26_03049 0.83 +0.8 3,170,109 - MPMX26_03049 0.83 +0.1 3,170,117 - MPMX26_03049 0.84 +0.0 3,170,117 - MPMX26_03049 0.84 +0.5 3,170,124 - MPMX26_03049 0.85 +0.7 3,170,141 - MPMX26_03049 0.86 -0.6 3,170,145 - MPMX26_03049 0.86 +0.3 3,170,145 - MPMX26_03049 0.86 +0.5 3,170,145 - MPMX26_03049 0.86 -0.2 3,170,145 - MPMX26_03049 0.86 -0.1 3,170,145 - MPMX26_03049 0.86 -0.4 3,170,145 - MPMX26_03049 0.86 -0.1 3,170,145 - MPMX26_03049 0.86 +0.3 3,170,145 - MPMX26_03049 0.86 +0.6 3,170,145 - MPMX26_03049 0.86 +0.5 3,170,145 - MPMX26_03049 0.86 +0.2 3,170,198 - -0.1 3,170,271 - +0.2 3,170,321 - +0.1 3,170,598 - -0.3 3,170,851 - +0.6 3,170,997 - +0.1 3,171,004 - -0.1 3,171,066 - -4.0 3,171,158 - MPMX26_03050 0.14 -5.3 3,171,158 - MPMX26_03050 0.14 -5.5 3,171,175 - MPMX26_03050 0.16 -3.9 3,171,206 - MPMX26_03050 0.19 -2.3 3,171,221 - MPMX26_03050 0.20 -3.4 3,171,221 - MPMX26_03050 0.20 -3.8 3,171,224 - MPMX26_03050 0.20 -4.9 3,171,224 - MPMX26_03050 0.20 -3.9 3,171,231 - MPMX26_03050 0.21 -2.9 3,171,239 - MPMX26_03050 0.21 -4.6 3,171,242 - MPMX26_03050 0.22 -2.4 3,171,242 - MPMX26_03050 0.22 -1.3 3,171,242 - MPMX26_03050 0.22 -2.9 3,171,242 - MPMX26_03050 0.22 -2.5 3,171,242 - MPMX26_03050 0.22 -3.3 3,171,242 - MPMX26_03050 0.22 -3.7 3,171,242 - MPMX26_03050 0.22 -3.8 3,171,255 - MPMX26_03050 0.23 -2.9 3,171,255 - MPMX26_03050 0.23 -2.5 3,171,261 - MPMX26_03050 0.23 -3.6 3,171,261 - MPMX26_03050 0.23 -2.7 3,171,261 - MPMX26_03050 0.23 -1.8 3,171,274 - MPMX26_03050 0.25 -4.6 3,171,274 - MPMX26_03050 0.25 -3.4 3,171,290 - MPMX26_03050 0.26 -3.0 3,171,311 - MPMX26_03050 0.28 -3.9 3,171,316 - MPMX26_03050 0.28 -2.9
Or see this region's nucleotide sequence