Experiment: L-Proline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02356 and MPMX26_02357 are separated by 276 nucleotides MPMX26_02357 and MPMX26_02358 are separated by 51 nucleotides MPMX26_02358 and MPMX26_02359 are separated by 144 nucleotides
MPMX26_02356: MPMX26_02356 - hypothetical protein, at 2,440,691 to 2,441,332
_02356
MPMX26_02357: MPMX26_02357 - Proline/betaine transporter, at 2,441,609 to 2,442,877
_02357
MPMX26_02358: MPMX26_02358 - hypothetical protein, at 2,442,929 to 2,443,426
_02358
MPMX26_02359: MPMX26_02359 - hypothetical protein, at 2,443,571 to 2,443,858
_02359
Position (kb)
2441
2442
2443 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1 at 2440.748 kb on + strand at 2440.748 kb on + strand at 2440.784 kb on + strand, within MPMX26_02356 at 2440.803 kb on + strand, within MPMX26_02356 at 2440.815 kb on + strand, within MPMX26_02356 at 2440.827 kb on + strand, within MPMX26_02356 at 2440.943 kb on + strand, within MPMX26_02356 at 2440.943 kb on + strand, within MPMX26_02356 at 2440.972 kb on + strand, within MPMX26_02356 at 2441.000 kb on + strand, within MPMX26_02356 at 2441.000 kb on + strand, within MPMX26_02356 at 2441.000 kb on + strand, within MPMX26_02356 at 2441.000 kb on + strand, within MPMX26_02356 at 2441.000 kb on + strand, within MPMX26_02356 at 2441.010 kb on + strand, within MPMX26_02356 at 2441.010 kb on + strand, within MPMX26_02356 at 2441.010 kb on + strand, within MPMX26_02356 at 2441.017 kb on + strand, within MPMX26_02356 at 2441.017 kb on + strand, within MPMX26_02356 at 2441.017 kb on + strand, within MPMX26_02356 at 2441.152 kb on + strand, within MPMX26_02356 at 2441.216 kb on + strand, within MPMX26_02356 at 2441.221 kb on + strand, within MPMX26_02356 at 2441.242 kb on + strand, within MPMX26_02356 at 2441.821 kb on - strand, within MPMX26_02357 at 2442.648 kb on - strand, within MPMX26_02357 at 2442.782 kb on + strand at 2443.185 kb on - strand, within MPMX26_02358 at 2443.234 kb on - strand, within MPMX26_02358 at 2443.631 kb on - strand, within MPMX26_02359 at 2443.695 kb on - strand, within MPMX26_02359 at 2443.717 kb on - strand, within MPMX26_02359
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (N) remove 2,440,748 + -0.1 2,440,748 + +0.2 2,440,784 + MPMX26_02356 0.14 +0.1 2,440,803 + MPMX26_02356 0.17 +0.3 2,440,815 + MPMX26_02356 0.19 -0.8 2,440,827 + MPMX26_02356 0.21 +0.1 2,440,943 + MPMX26_02356 0.39 -0.3 2,440,943 + MPMX26_02356 0.39 -0.2 2,440,972 + MPMX26_02356 0.44 -1.0 2,441,000 + MPMX26_02356 0.48 -0.3 2,441,000 + MPMX26_02356 0.48 -0.1 2,441,000 + MPMX26_02356 0.48 -6.2 2,441,000 + MPMX26_02356 0.48 -0.2 2,441,000 + MPMX26_02356 0.48 -0.0 2,441,010 + MPMX26_02356 0.50 -0.1 2,441,010 + MPMX26_02356 0.50 +0.4 2,441,010 + MPMX26_02356 0.50 +0.6 2,441,017 + MPMX26_02356 0.51 -0.1 2,441,017 + MPMX26_02356 0.51 -0.5 2,441,017 + MPMX26_02356 0.51 +0.5 2,441,152 + MPMX26_02356 0.72 -0.7 2,441,216 + MPMX26_02356 0.82 -1.3 2,441,221 + MPMX26_02356 0.83 -0.2 2,441,242 + MPMX26_02356 0.86 -1.2 2,441,821 - MPMX26_02357 0.17 -0.2 2,442,648 - MPMX26_02357 0.82 -1.0 2,442,782 + +0.1 2,443,185 - MPMX26_02358 0.51 -0.4 2,443,234 - MPMX26_02358 0.61 -0.5 2,443,631 - MPMX26_02359 0.21 +0.6 2,443,695 - MPMX26_02359 0.43 -0.8 2,443,717 - MPMX26_02359 0.51 +0.4
Or see this region's nucleotide sequence