Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02353

Experiment: L-Proline (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02351 and MPMX26_02352 are separated by 188 nucleotidesMPMX26_02352 and MPMX26_02353 overlap by 4 nucleotidesMPMX26_02353 and MPMX26_02354 are separated by 632 nucleotides MPMX26_02351: MPMX26_02351 - Methionine synthase, at 2,430,420 to 2,434,106 _02351 MPMX26_02352: MPMX26_02352 - hypothetical protein, at 2,434,295 to 2,434,480 _02352 MPMX26_02353: MPMX26_02353 - 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase, at 2,434,477 to 2,436,186 _02353 MPMX26_02354: MPMX26_02354 - Fosfomycin resistance protein AbaF, at 2,436,819 to 2,438,207 _02354 Position (kb) 2434 2435 2436 2437Strain fitness (log2 ratio) -2 -1 0 1at 2433.573 kb on + strand, within MPMX26_02351at 2433.585 kb on + strand, within MPMX26_02351at 2433.585 kb on + strand, within MPMX26_02351at 2433.585 kb on + strand, within MPMX26_02351at 2433.590 kb on + strand, within MPMX26_02351at 2433.595 kb on + strand, within MPMX26_02351at 2433.595 kb on + strand, within MPMX26_02351at 2433.595 kb on + strand, within MPMX26_02351at 2433.604 kb on + strand, within MPMX26_02351at 2433.604 kb on + strand, within MPMX26_02351at 2433.604 kb on + strand, within MPMX26_02351at 2433.605 kb on + strand, within MPMX26_02351at 2433.628 kb on + strand, within MPMX26_02351at 2433.642 kb on + strand, within MPMX26_02351at 2433.661 kb on + strand, within MPMX26_02351at 2433.668 kb on + strand, within MPMX26_02351at 2433.668 kb on + strand, within MPMX26_02351at 2433.668 kb on + strand, within MPMX26_02351at 2433.668 kb on + strand, within MPMX26_02351at 2433.668 kb on + strand, within MPMX26_02351at 2433.673 kb on + strand, within MPMX26_02351at 2433.689 kb on + strand, within MPMX26_02351at 2433.689 kb on + strand, within MPMX26_02351at 2433.689 kb on + strand, within MPMX26_02351at 2433.689 kb on + strand, within MPMX26_02351at 2433.689 kb on + strand, within MPMX26_02351at 2433.689 kb on + strand, within MPMX26_02351at 2433.689 kb on + strand, within MPMX26_02351at 2433.689 kb on + strand, within MPMX26_02351at 2433.689 kb on + strand, within MPMX26_02351at 2433.689 kb on + strand, within MPMX26_02351at 2433.689 kb on + strand, within MPMX26_02351at 2433.731 kb on + strand, within MPMX26_02351at 2433.736 kb on + strand, within MPMX26_02351at 2433.752 kb on + strandat 2433.752 kb on + strandat 2433.752 kb on + strandat 2433.752 kb on + strandat 2433.772 kb on + strandat 2433.817 kb on + strandat 2433.833 kb on + strandat 2433.837 kb on + strandat 2433.837 kb on + strandat 2433.842 kb on + strandat 2433.842 kb on + strandat 2433.842 kb on + strandat 2433.842 kb on + strandat 2433.847 kb on + strandat 2433.847 kb on + strandat 2433.847 kb on + strandat 2433.847 kb on + strandat 2433.847 kb on + strandat 2433.847 kb on + strandat 2433.847 kb on + strandat 2433.847 kb on + strandat 2433.847 kb on + strandat 2433.847 kb on + strandat 2433.847 kb on + strandat 2433.847 kb on + strandat 2433.847 kb on + strandat 2433.847 kb on + strandat 2433.847 kb on + strandat 2433.847 kb on + strandat 2433.847 kb on + strandat 2433.847 kb on + strandat 2433.847 kb on + strandat 2433.847 kb on + strandat 2433.847 kb on + strandat 2433.847 kb on + strandat 2433.847 kb on + strandat 2433.870 kb on + strandat 2433.873 kb on + strandat 2433.887 kb on + strandat 2433.902 kb on + strandat 2433.902 kb on + strandat 2433.902 kb on + strandat 2433.902 kb on + strandat 2433.904 kb on + strandat 2433.907 kb on + strandat 2433.943 kb on + strandat 2433.943 kb on + strandat 2433.962 kb on + strandat 2433.964 kb on + strandat 2433.964 kb on + strandat 2433.964 kb on + strandat 2433.972 kb on + strandat 2434.072 kb on + strandat 2434.447 kb on - strand, within MPMX26_02352at 2434.995 kb on - strand, within MPMX26_02353at 2436.079 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline (N)
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2,433,573 + MPMX26_02351 0.86 -0.1
2,433,585 + MPMX26_02351 0.86 -0.0
2,433,585 + MPMX26_02351 0.86 +0.1
2,433,585 + MPMX26_02351 0.86 -0.1
2,433,590 + MPMX26_02351 0.86 +0.3
2,433,595 + MPMX26_02351 0.86 +0.1
2,433,595 + MPMX26_02351 0.86 +0.3
2,433,595 + MPMX26_02351 0.86 +0.2
2,433,604 + MPMX26_02351 0.86 -0.1
2,433,604 + MPMX26_02351 0.86 +0.2
2,433,604 + MPMX26_02351 0.86 +0.0
2,433,605 + MPMX26_02351 0.86 +0.2
2,433,628 + MPMX26_02351 0.87 +0.6
2,433,642 + MPMX26_02351 0.87 -0.1
2,433,661 + MPMX26_02351 0.88 +0.5
2,433,668 + MPMX26_02351 0.88 +0.3
2,433,668 + MPMX26_02351 0.88 +0.6
2,433,668 + MPMX26_02351 0.88 +0.4
2,433,668 + MPMX26_02351 0.88 +0.3
2,433,668 + MPMX26_02351 0.88 +0.5
2,433,673 + MPMX26_02351 0.88 -0.0
2,433,689 + MPMX26_02351 0.89 +0.1
2,433,689 + MPMX26_02351 0.89 -0.8
2,433,689 + MPMX26_02351 0.89 -0.4
2,433,689 + MPMX26_02351 0.89 -0.1
2,433,689 + MPMX26_02351 0.89 +0.7
2,433,689 + MPMX26_02351 0.89 +0.5
2,433,689 + MPMX26_02351 0.89 +0.5
2,433,689 + MPMX26_02351 0.89 -2.4
2,433,689 + MPMX26_02351 0.89 +0.1
2,433,689 + MPMX26_02351 0.89 +0.9
2,433,689 + MPMX26_02351 0.89 -0.5
2,433,731 + MPMX26_02351 0.90 +0.4
2,433,736 + MPMX26_02351 0.90 +0.5
2,433,752 + +0.5
2,433,752 + +0.2
2,433,752 + +0.2
2,433,752 + +0.1
2,433,772 + +0.2
2,433,817 + +0.1
2,433,833 + +0.2
2,433,837 + +0.1
2,433,837 + +0.2
2,433,842 + +0.2
2,433,842 + +0.1
2,433,842 + +0.1
2,433,842 + +0.1
2,433,847 + +0.1
2,433,847 + +0.0
2,433,847 + -0.7
2,433,847 + -0.1
2,433,847 + +0.7
2,433,847 + +0.3
2,433,847 + +0.0
2,433,847 + +0.9
2,433,847 + +0.4
2,433,847 + +1.4
2,433,847 + +0.5
2,433,847 + +0.3
2,433,847 + +0.7
2,433,847 + +0.6
2,433,847 + +0.3
2,433,847 + +0.1
2,433,847 + +0.1
2,433,847 + +0.2
2,433,847 + +0.3
2,433,847 + +0.1
2,433,847 + -0.2
2,433,847 + +0.6
2,433,847 + +0.0
2,433,870 + +0.5
2,433,873 + +0.2
2,433,887 + -0.1
2,433,902 + +0.1
2,433,902 + +0.4
2,433,902 + +0.3
2,433,902 + +0.0
2,433,904 + +0.5
2,433,907 + +0.2
2,433,943 + +0.4
2,433,943 + +0.6
2,433,962 + +0.1
2,433,964 + +0.5
2,433,964 + +0.2
2,433,964 + +0.7
2,433,972 + -0.0
2,434,072 + +0.7
2,434,447 - MPMX26_02352 0.82 -0.5
2,434,995 - MPMX26_02353 0.30 -1.3
2,436,079 + -1.3

Or see this region's nucleotide sequence