Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02029

Experiment: L-Proline (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02028 and MPMX26_02029 are separated by 191 nucleotidesMPMX26_02029 and MPMX26_02030 are separated by 18 nucleotidesMPMX26_02030 and MPMX26_02031 are separated by 31 nucleotides MPMX26_02028: MPMX26_02028 - NAD kinase, at 2,093,691 to 2,094,596 _02028 MPMX26_02029: MPMX26_02029 - Penicillin-binding protein 1B, at 2,094,788 to 2,097,190 _02029 MPMX26_02030: MPMX26_02030 - hypothetical protein, at 2,097,209 to 2,097,763 _02030 MPMX26_02031: MPMX26_02031 - Thiamine-phosphate synthase, at 2,097,795 to 2,098,694 _02031 Position (kb) 2094 2095 2096 2097 2098Strain fitness (log2 ratio) -3 -2 -1 0 1at 2094.953 kb on + strandat 2094.983 kb on + strandat 2094.983 kb on + strandat 2094.983 kb on + strandat 2095.066 kb on + strand, within MPMX26_02029at 2095.106 kb on + strand, within MPMX26_02029at 2095.114 kb on + strand, within MPMX26_02029at 2095.196 kb on + strand, within MPMX26_02029at 2095.196 kb on + strand, within MPMX26_02029at 2095.243 kb on + strand, within MPMX26_02029at 2095.243 kb on + strand, within MPMX26_02029at 2095.264 kb on + strand, within MPMX26_02029at 2095.318 kb on + strand, within MPMX26_02029at 2095.319 kb on + strand, within MPMX26_02029at 2095.375 kb on + strand, within MPMX26_02029at 2095.487 kb on + strand, within MPMX26_02029at 2095.544 kb on + strand, within MPMX26_02029at 2095.627 kb on + strand, within MPMX26_02029at 2095.627 kb on + strand, within MPMX26_02029at 2095.676 kb on + strand, within MPMX26_02029at 2095.688 kb on + strand, within MPMX26_02029at 2095.688 kb on + strand, within MPMX26_02029at 2095.759 kb on + strand, within MPMX26_02029at 2095.792 kb on + strand, within MPMX26_02029at 2095.885 kb on + strand, within MPMX26_02029at 2095.907 kb on + strand, within MPMX26_02029at 2095.955 kb on + strand, within MPMX26_02029at 2095.955 kb on + strand, within MPMX26_02029at 2095.955 kb on + strand, within MPMX26_02029at 2095.955 kb on + strand, within MPMX26_02029at 2095.955 kb on + strand, within MPMX26_02029at 2095.955 kb on + strand, within MPMX26_02029at 2095.955 kb on + strand, within MPMX26_02029at 2095.955 kb on + strand, within MPMX26_02029at 2095.955 kb on + strand, within MPMX26_02029at 2095.955 kb on + strand, within MPMX26_02029at 2095.955 kb on + strand, within MPMX26_02029at 2095.955 kb on + strand, within MPMX26_02029at 2095.955 kb on + strand, within MPMX26_02029at 2095.955 kb on + strand, within MPMX26_02029at 2095.955 kb on + strand, within MPMX26_02029at 2095.955 kb on + strand, within MPMX26_02029at 2095.955 kb on + strand, within MPMX26_02029at 2095.955 kb on + strand, within MPMX26_02029at 2095.955 kb on + strand, within MPMX26_02029at 2096.008 kb on + strand, within MPMX26_02029at 2096.008 kb on + strand, within MPMX26_02029at 2096.040 kb on + strand, within MPMX26_02029at 2096.040 kb on + strand, within MPMX26_02029at 2096.040 kb on + strand, within MPMX26_02029at 2096.045 kb on + strand, within MPMX26_02029at 2096.057 kb on + strand, within MPMX26_02029at 2096.074 kb on + strand, within MPMX26_02029at 2096.196 kb on + strand, within MPMX26_02029at 2096.201 kb on + strand, within MPMX26_02029at 2096.201 kb on + strand, within MPMX26_02029at 2096.228 kb on + strand, within MPMX26_02029at 2096.257 kb on + strand, within MPMX26_02029at 2096.257 kb on + strand, within MPMX26_02029at 2096.309 kb on + strand, within MPMX26_02029at 2096.320 kb on + strand, within MPMX26_02029at 2096.320 kb on + strand, within MPMX26_02029at 2096.320 kb on + strand, within MPMX26_02029at 2096.320 kb on + strand, within MPMX26_02029at 2096.326 kb on + strand, within MPMX26_02029at 2096.354 kb on + strand, within MPMX26_02029at 2096.354 kb on + strand, within MPMX26_02029at 2096.408 kb on + strand, within MPMX26_02029at 2096.408 kb on + strand, within MPMX26_02029at 2096.416 kb on + strand, within MPMX26_02029at 2096.416 kb on + strand, within MPMX26_02029at 2096.435 kb on + strand, within MPMX26_02029at 2096.530 kb on + strand, within MPMX26_02029at 2096.558 kb on + strand, within MPMX26_02029at 2096.647 kb on + strand, within MPMX26_02029at 2096.647 kb on + strand, within MPMX26_02029at 2096.647 kb on + strand, within MPMX26_02029at 2096.647 kb on + strand, within MPMX26_02029at 2096.647 kb on + strand, within MPMX26_02029at 2096.666 kb on + strand, within MPMX26_02029at 2096.666 kb on + strand, within MPMX26_02029at 2096.666 kb on + strand, within MPMX26_02029at 2096.668 kb on + strand, within MPMX26_02029at 2096.698 kb on + strand, within MPMX26_02029at 2096.749 kb on + strand, within MPMX26_02029at 2096.764 kb on + strand, within MPMX26_02029at 2096.767 kb on + strand, within MPMX26_02029at 2096.773 kb on + strand, within MPMX26_02029at 2096.778 kb on + strand, within MPMX26_02029at 2096.783 kb on + strand, within MPMX26_02029at 2096.783 kb on + strand, within MPMX26_02029at 2096.807 kb on + strand, within MPMX26_02029at 2096.884 kb on + strand, within MPMX26_02029at 2096.892 kb on + strand, within MPMX26_02029at 2096.905 kb on + strand, within MPMX26_02029at 2096.905 kb on + strand, within MPMX26_02029at 2096.908 kb on + strand, within MPMX26_02029at 2096.913 kb on + strand, within MPMX26_02029at 2096.942 kb on + strand, within MPMX26_02029at 2096.942 kb on + strand, within MPMX26_02029at 2096.942 kb on + strand, within MPMX26_02029at 2096.942 kb on + strand, within MPMX26_02029at 2096.942 kb on + strand, within MPMX26_02029at 2096.942 kb on + strand, within MPMX26_02029at 2096.947 kb on + strand, within MPMX26_02029at 2096.947 kb on + strand, within MPMX26_02029at 2096.947 kb on + strand, within MPMX26_02029at 2096.947 kb on + strand, within MPMX26_02029at 2096.957 kb on + strandat 2096.970 kb on + strandat 2096.970 kb on + strandat 2096.970 kb on + strandat 2096.970 kb on + strandat 2096.970 kb on + strandat 2096.970 kb on + strandat 2096.970 kb on + strandat 2096.970 kb on + strandat 2096.980 kb on + strandat 2096.980 kb on + strandat 2096.980 kb on + strandat 2096.980 kb on + strandat 2096.980 kb on + strandat 2096.980 kb on + strandat 2096.980 kb on + strandat 2096.980 kb on + strandat 2096.980 kb on + strandat 2096.980 kb on + strandat 2096.985 kb on + strandat 2096.985 kb on + strandat 2096.990 kb on + strandat 2096.990 kb on + strandat 2096.990 kb on + strandat 2096.990 kb on + strandat 2096.990 kb on + strandat 2096.990 kb on + strandat 2096.990 kb on + strandat 2096.990 kb on + strandat 2096.990 kb on + strandat 2096.990 kb on + strandat 2096.990 kb on + strandat 2096.990 kb on + strandat 2096.990 kb on + strandat 2096.990 kb on + strandat 2096.998 kb on - strandat 2097.009 kb on + strandat 2097.040 kb on + strandat 2097.074 kb on + strandat 2097.083 kb on + strandat 2097.088 kb on + strandat 2097.109 kb on + strandat 2097.131 kb on + strandat 2097.131 kb on + strandat 2097.136 kb on + strandat 2097.247 kb on + strandat 2097.331 kb on + strand, within MPMX26_02030at 2097.331 kb on + strand, within MPMX26_02030at 2097.331 kb on + strand, within MPMX26_02030at 2097.331 kb on + strand, within MPMX26_02030at 2097.331 kb on + strand, within MPMX26_02030at 2097.331 kb on + strand, within MPMX26_02030at 2097.331 kb on + strand, within MPMX26_02030at 2097.331 kb on + strand, within MPMX26_02030at 2097.361 kb on + strand, within MPMX26_02030at 2097.391 kb on + strand, within MPMX26_02030at 2097.391 kb on + strand, within MPMX26_02030at 2097.400 kb on + strand, within MPMX26_02030at 2097.400 kb on + strand, within MPMX26_02030at 2097.430 kb on + strand, within MPMX26_02030at 2097.430 kb on + strand, within MPMX26_02030at 2097.430 kb on + strand, within MPMX26_02030at 2097.430 kb on + strand, within MPMX26_02030at 2097.430 kb on + strand, within MPMX26_02030at 2097.430 kb on + strand, within MPMX26_02030at 2097.430 kb on + strand, within MPMX26_02030at 2097.430 kb on + strand, within MPMX26_02030at 2097.441 kb on + strand, within MPMX26_02030at 2097.500 kb on + strand, within MPMX26_02030at 2097.515 kb on + strand, within MPMX26_02030at 2097.569 kb on + strand, within MPMX26_02030at 2097.638 kb on + strand, within MPMX26_02030at 2097.638 kb on + strand, within MPMX26_02030at 2097.638 kb on + strand, within MPMX26_02030at 2097.638 kb on + strand, within MPMX26_02030at 2097.645 kb on + strand, within MPMX26_02030at 2097.650 kb on + strand, within MPMX26_02030at 2097.650 kb on + strand, within MPMX26_02030at 2097.655 kb on + strand, within MPMX26_02030at 2097.655 kb on + strand, within MPMX26_02030at 2097.655 kb on + strand, within MPMX26_02030at 2097.655 kb on + strand, within MPMX26_02030at 2097.655 kb on + strand, within MPMX26_02030at 2097.655 kb on + strand, within MPMX26_02030at 2097.655 kb on + strand, within MPMX26_02030at 2097.655 kb on + strand, within MPMX26_02030at 2097.655 kb on + strand, within MPMX26_02030at 2097.655 kb on + strand, within MPMX26_02030at 2097.655 kb on + strand, within MPMX26_02030at 2097.655 kb on + strand, within MPMX26_02030at 2097.736 kb on + strandat 2097.736 kb on + strandat 2097.736 kb on + strandat 2097.746 kb on + strandat 2097.746 kb on + strandat 2097.751 kb on + strandat 2097.834 kb on - strandat 2097.854 kb on - strandat 2097.854 kb on - strandat 2097.854 kb on - strandat 2097.854 kb on - strandat 2097.854 kb on - strandat 2097.854 kb on - strandat 2097.854 kb on - strandat 2097.854 kb on - strandat 2097.878 kb on - strandat 2097.935 kb on - strand, within MPMX26_02031at 2097.935 kb on - strand, within MPMX26_02031at 2097.959 kb on - strand, within MPMX26_02031at 2097.959 kb on - strand, within MPMX26_02031at 2097.968 kb on - strand, within MPMX26_02031at 2097.968 kb on - strand, within MPMX26_02031at 2097.968 kb on - strand, within MPMX26_02031at 2097.968 kb on - strand, within MPMX26_02031at 2097.978 kb on - strand, within MPMX26_02031at 2097.978 kb on - strand, within MPMX26_02031at 2097.983 kb on - strand, within MPMX26_02031at 2097.983 kb on - strand, within MPMX26_02031at 2098.004 kb on - strand, within MPMX26_02031at 2098.016 kb on - strand, within MPMX26_02031at 2098.016 kb on - strand, within MPMX26_02031at 2098.016 kb on - strand, within MPMX26_02031at 2098.091 kb on - strand, within MPMX26_02031at 2098.091 kb on - strand, within MPMX26_02031

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline (N)
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2,094,953 + -0.8
2,094,983 + -0.8
2,094,983 + -1.2
2,094,983 + -1.3
2,095,066 + MPMX26_02029 0.12 -1.8
2,095,106 + MPMX26_02029 0.13 -2.4
2,095,114 + MPMX26_02029 0.14 -1.6
2,095,196 + MPMX26_02029 0.17 -1.7
2,095,196 + MPMX26_02029 0.17 -1.3
2,095,243 + MPMX26_02029 0.19 -0.5
2,095,243 + MPMX26_02029 0.19 -1.0
2,095,264 + MPMX26_02029 0.20 -1.1
2,095,318 + MPMX26_02029 0.22 -0.7
2,095,319 + MPMX26_02029 0.22 -2.2
2,095,375 + MPMX26_02029 0.24 -0.6
2,095,487 + MPMX26_02029 0.29 -1.0
2,095,544 + MPMX26_02029 0.31 -1.3
2,095,627 + MPMX26_02029 0.35 -1.5
2,095,627 + MPMX26_02029 0.35 -1.3
2,095,676 + MPMX26_02029 0.37 -0.7
2,095,688 + MPMX26_02029 0.37 -2.2
2,095,688 + MPMX26_02029 0.37 -0.0
2,095,759 + MPMX26_02029 0.40 -0.9
2,095,792 + MPMX26_02029 0.42 -1.2
2,095,885 + MPMX26_02029 0.46 -0.9
2,095,907 + MPMX26_02029 0.47 -1.3
2,095,955 + MPMX26_02029 0.49 -0.4
2,095,955 + MPMX26_02029 0.49 -2.0
2,095,955 + MPMX26_02029 0.49 -1.9
2,095,955 + MPMX26_02029 0.49 -0.6
2,095,955 + MPMX26_02029 0.49 -1.1
2,095,955 + MPMX26_02029 0.49 +0.4
2,095,955 + MPMX26_02029 0.49 -1.6
2,095,955 + MPMX26_02029 0.49 +0.3
2,095,955 + MPMX26_02029 0.49 -0.4
2,095,955 + MPMX26_02029 0.49 -1.1
2,095,955 + MPMX26_02029 0.49 -2.2
2,095,955 + MPMX26_02029 0.49 -0.7
2,095,955 + MPMX26_02029 0.49 -2.3
2,095,955 + MPMX26_02029 0.49 -0.7
2,095,955 + MPMX26_02029 0.49 -2.2
2,095,955 + MPMX26_02029 0.49 -2.9
2,095,955 + MPMX26_02029 0.49 -2.9
2,095,955 + MPMX26_02029 0.49 -3.5
2,095,955 + MPMX26_02029 0.49 -1.6
2,096,008 + MPMX26_02029 0.51 -0.5
2,096,008 + MPMX26_02029 0.51 -1.2
2,096,040 + MPMX26_02029 0.52 -0.7
2,096,040 + MPMX26_02029 0.52 -0.4
2,096,040 + MPMX26_02029 0.52 -1.2
2,096,045 + MPMX26_02029 0.52 -0.9
2,096,057 + MPMX26_02029 0.53 -1.3
2,096,074 + MPMX26_02029 0.54 -1.9
2,096,196 + MPMX26_02029 0.59 -1.0
2,096,201 + MPMX26_02029 0.59 -2.3
2,096,201 + MPMX26_02029 0.59 -1.0
2,096,228 + MPMX26_02029 0.60 -1.9
2,096,257 + MPMX26_02029 0.61 -1.3
2,096,257 + MPMX26_02029 0.61 -1.7
2,096,309 + MPMX26_02029 0.63 -0.9
2,096,320 + MPMX26_02029 0.64 -0.3
2,096,320 + MPMX26_02029 0.64 -2.4
2,096,320 + MPMX26_02029 0.64 -2.3
2,096,320 + MPMX26_02029 0.64 +0.2
2,096,326 + MPMX26_02029 0.64 -1.4
2,096,354 + MPMX26_02029 0.65 -1.2
2,096,354 + MPMX26_02029 0.65 -0.0
2,096,408 + MPMX26_02029 0.67 -1.7
2,096,408 + MPMX26_02029 0.67 +0.6
2,096,416 + MPMX26_02029 0.68 -1.4
2,096,416 + MPMX26_02029 0.68 -1.4
2,096,435 + MPMX26_02029 0.69 -0.6
2,096,530 + MPMX26_02029 0.72 -2.7
2,096,558 + MPMX26_02029 0.74 -1.4
2,096,647 + MPMX26_02029 0.77 -2.1
2,096,647 + MPMX26_02029 0.77 -2.2
2,096,647 + MPMX26_02029 0.77 -1.4
2,096,647 + MPMX26_02029 0.77 -1.6
2,096,647 + MPMX26_02029 0.77 -2.2
2,096,666 + MPMX26_02029 0.78 -1.7
2,096,666 + MPMX26_02029 0.78 -2.2
2,096,666 + MPMX26_02029 0.78 -1.1
2,096,668 + MPMX26_02029 0.78 -2.2
2,096,698 + MPMX26_02029 0.79 -1.0
2,096,749 + MPMX26_02029 0.82 -1.0
2,096,764 + MPMX26_02029 0.82 +0.9
2,096,767 + MPMX26_02029 0.82 -2.0
2,096,773 + MPMX26_02029 0.83 -1.0
2,096,778 + MPMX26_02029 0.83 -0.8
2,096,783 + MPMX26_02029 0.83 +0.4
2,096,783 + MPMX26_02029 0.83 -1.2
2,096,807 + MPMX26_02029 0.84 -2.2
2,096,884 + MPMX26_02029 0.87 -1.4
2,096,892 + MPMX26_02029 0.88 -0.7
2,096,905 + MPMX26_02029 0.88 -2.1
2,096,905 + MPMX26_02029 0.88 -1.5
2,096,908 + MPMX26_02029 0.88 -1.3
2,096,913 + MPMX26_02029 0.88 -1.9
2,096,942 + MPMX26_02029 0.90 -0.9
2,096,942 + MPMX26_02029 0.90 +0.4
2,096,942 + MPMX26_02029 0.90 -1.4
2,096,942 + MPMX26_02029 0.90 -1.5
2,096,942 + MPMX26_02029 0.90 -1.3
2,096,942 + MPMX26_02029 0.90 -1.8
2,096,947 + MPMX26_02029 0.90 -0.5
2,096,947 + MPMX26_02029 0.90 -1.7
2,096,947 + MPMX26_02029 0.90 -1.7
2,096,947 + MPMX26_02029 0.90 -1.6
2,096,957 + -0.0
2,096,970 + -0.2
2,096,970 + +0.5
2,096,970 + +0.5
2,096,970 + -1.7
2,096,970 + +0.3
2,096,970 + -0.8
2,096,970 + +0.2
2,096,970 + +0.5
2,096,980 + -0.2
2,096,980 + -0.0
2,096,980 + +0.2
2,096,980 + -0.3
2,096,980 + -0.3
2,096,980 + -0.5
2,096,980 + -2.3
2,096,980 + -0.3
2,096,980 + -0.8
2,096,980 + -0.9
2,096,985 + +0.7
2,096,985 + -0.8
2,096,990 + -0.7
2,096,990 + -0.4
2,096,990 + -0.5
2,096,990 + -1.0
2,096,990 + +0.1
2,096,990 + -1.0
2,096,990 + -0.4
2,096,990 + -0.8
2,096,990 + -0.6
2,096,990 + -0.1
2,096,990 + -1.3
2,096,990 + -0.7
2,096,990 + -0.3
2,096,990 + -0.3
2,096,998 - -0.7
2,097,009 + -0.3
2,097,040 + -0.3
2,097,074 + -0.2
2,097,083 + -0.7
2,097,088 + -0.0
2,097,109 + -0.0
2,097,131 + -0.1
2,097,131 + -0.2
2,097,136 + +0.7
2,097,247 + +0.3
2,097,331 + MPMX26_02030 0.22 -0.2
2,097,331 + MPMX26_02030 0.22 -0.1
2,097,331 + MPMX26_02030 0.22 +0.1
2,097,331 + MPMX26_02030 0.22 +0.3
2,097,331 + MPMX26_02030 0.22 +0.2
2,097,331 + MPMX26_02030 0.22 +0.1
2,097,331 + MPMX26_02030 0.22 -0.5
2,097,331 + MPMX26_02030 0.22 -0.1
2,097,361 + MPMX26_02030 0.27 +0.2
2,097,391 + MPMX26_02030 0.33 -0.1
2,097,391 + MPMX26_02030 0.33 +0.2
2,097,400 + MPMX26_02030 0.34 -0.3
2,097,400 + MPMX26_02030 0.34 -0.1
2,097,430 + MPMX26_02030 0.40 -0.7
2,097,430 + MPMX26_02030 0.40 +0.1
2,097,430 + MPMX26_02030 0.40 +0.0
2,097,430 + MPMX26_02030 0.40 +0.2
2,097,430 + MPMX26_02030 0.40 +0.2
2,097,430 + MPMX26_02030 0.40 -0.2
2,097,430 + MPMX26_02030 0.40 -0.3
2,097,430 + MPMX26_02030 0.40 +0.3
2,097,441 + MPMX26_02030 0.42 +1.3
2,097,500 + MPMX26_02030 0.52 +0.1
2,097,515 + MPMX26_02030 0.55 -0.0
2,097,569 + MPMX26_02030 0.65 +0.4
2,097,638 + MPMX26_02030 0.77 +0.0
2,097,638 + MPMX26_02030 0.77 +0.3
2,097,638 + MPMX26_02030 0.77 +0.2
2,097,638 + MPMX26_02030 0.77 -0.0
2,097,645 + MPMX26_02030 0.79 -0.1
2,097,650 + MPMX26_02030 0.79 -0.3
2,097,650 + MPMX26_02030 0.79 -0.1
2,097,655 + MPMX26_02030 0.80 -0.0
2,097,655 + MPMX26_02030 0.80 -0.2
2,097,655 + MPMX26_02030 0.80 +0.0
2,097,655 + MPMX26_02030 0.80 -0.0
2,097,655 + MPMX26_02030 0.80 -0.2
2,097,655 + MPMX26_02030 0.80 -0.6
2,097,655 + MPMX26_02030 0.80 -0.1
2,097,655 + MPMX26_02030 0.80 +0.1
2,097,655 + MPMX26_02030 0.80 +0.1
2,097,655 + MPMX26_02030 0.80 +0.7
2,097,655 + MPMX26_02030 0.80 -1.5
2,097,655 + MPMX26_02030 0.80 +0.5
2,097,736 + +0.3
2,097,736 + -0.4
2,097,736 + -0.2
2,097,746 + -0.7
2,097,746 + +0.1
2,097,751 + +1.0
2,097,834 - -0.9
2,097,854 - -1.9
2,097,854 - +1.1
2,097,854 - +1.2
2,097,854 - +0.7
2,097,854 - +0.2
2,097,854 - -1.0
2,097,854 - +0.0
2,097,854 - +0.1
2,097,878 - +0.6
2,097,935 - MPMX26_02031 0.16 +1.4
2,097,935 - MPMX26_02031 0.16 -0.0
2,097,959 - MPMX26_02031 0.18 +1.1
2,097,959 - MPMX26_02031 0.18 -0.4
2,097,968 - MPMX26_02031 0.19 -0.3
2,097,968 - MPMX26_02031 0.19 +1.1
2,097,968 - MPMX26_02031 0.19 +0.0
2,097,968 - MPMX26_02031 0.19 +1.3
2,097,978 - MPMX26_02031 0.20 +1.5
2,097,978 - MPMX26_02031 0.20 +0.7
2,097,983 - MPMX26_02031 0.21 -0.4
2,097,983 - MPMX26_02031 0.21 +0.8
2,098,004 - MPMX26_02031 0.23 +0.5
2,098,016 - MPMX26_02031 0.25 -0.4
2,098,016 - MPMX26_02031 0.25 -0.1
2,098,016 - MPMX26_02031 0.25 -0.3
2,098,091 - MPMX26_02031 0.33 -0.5
2,098,091 - MPMX26_02031 0.33 +0.2

Or see this region's nucleotide sequence