Experiment: L-Proline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01647 and MPMX26_01648 are separated by 262 nucleotides MPMX26_01648 and MPMX26_01649 overlap by 11 nucleotides MPMX26_01649 and MPMX26_01650 are separated by 85 nucleotides MPMX26_01650 and MPMX26_01651 are separated by 70 nucleotides
MPMX26_01647: MPMX26_01647 - 2-(hydroxymethyl)glutarate dehydrogenase, at 1,706,850 to 1,707,722
_01647
MPMX26_01648: MPMX26_01648 - Arsenical-resistance protein Acr3, at 1,707,985 to 1,709,046
_01648
MPMX26_01649: MPMX26_01649 - hypothetical protein, at 1,709,036 to 1,709,350
_01649
MPMX26_01650: MPMX26_01650 - Arsenate reductase, at 1,709,436 to 1,709,864
_01650
MPMX26_01651: MPMX26_01651 - hypothetical protein, at 1,709,935 to 1,710,156
_01651
Position (kb)
1707
1708
1709
1710 Strain fitness (log2 ratio)
-2
-1
0
1 at 1707.068 kb on + strand, within MPMX26_01647 at 1707.105 kb on + strand, within MPMX26_01647 at 1707.113 kb on + strand, within MPMX26_01647 at 1707.113 kb on + strand, within MPMX26_01647 at 1707.113 kb on + strand, within MPMX26_01647 at 1707.191 kb on + strand, within MPMX26_01647 at 1707.261 kb on + strand, within MPMX26_01647 at 1707.282 kb on + strand, within MPMX26_01647 at 1707.305 kb on + strand, within MPMX26_01647 at 1707.327 kb on + strand, within MPMX26_01647 at 1707.329 kb on + strand, within MPMX26_01647 at 1707.431 kb on + strand, within MPMX26_01647 at 1707.534 kb on + strand, within MPMX26_01647 at 1707.554 kb on + strand, within MPMX26_01647 at 1707.656 kb on + strand at 1708.750 kb on + strand, within MPMX26_01648
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (N) remove 1,707,068 + MPMX26_01647 0.25 -2.2 1,707,105 + MPMX26_01647 0.29 +0.2 1,707,113 + MPMX26_01647 0.30 -0.2 1,707,113 + MPMX26_01647 0.30 +0.6 1,707,113 + MPMX26_01647 0.30 +1.6 1,707,191 + MPMX26_01647 0.39 -1.3 1,707,261 + MPMX26_01647 0.47 -0.3 1,707,282 + MPMX26_01647 0.49 +0.4 1,707,305 + MPMX26_01647 0.52 +0.7 1,707,327 + MPMX26_01647 0.55 +0.1 1,707,329 + MPMX26_01647 0.55 +0.5 1,707,431 + MPMX26_01647 0.67 -0.5 1,707,534 + MPMX26_01647 0.78 -0.1 1,707,554 + MPMX26_01647 0.81 +1.1 1,707,656 + +1.6 1,708,750 + MPMX26_01648 0.72 -0.6
Or see this region's nucleotide sequence