Experiment: L-Proline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01330 and MPMX26_01331 are separated by 157 nucleotides MPMX26_01331 and MPMX26_01332 are separated by 128 nucleotides MPMX26_01332 and MPMX26_01333 are separated by 54 nucleotides MPMX26_01333 and MPMX26_01334 are separated by 91 nucleotides
MPMX26_01330: MPMX26_01330 - hypothetical protein, at 1,404,697 to 1,405,173
_01330
MPMX26_01331: MPMX26_01331 - DNA-binding protein HU-beta, at 1,405,331 to 1,405,603
_01331
MPMX26_01332: MPMX26_01332 - Peptidyl-prolyl cis-trans isomerase D, at 1,405,732 to 1,407,603
_01332
MPMX26_01333: MPMX26_01333 - hypothetical protein, at 1,407,658 to 1,408,149
_01333
MPMX26_01334: MPMX26_01334 - Acyl-CoA dehydrogenase, short-chain specific, at 1,408,241 to 1,409,440
_01334
Position (kb)
1405
1406
1407
1408 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1404.888 kb on + strand, within MPMX26_01330 at 1405.018 kb on + strand, within MPMX26_01330 at 1405.288 kb on + strand at 1405.288 kb on + strand at 1405.319 kb on + strand at 1405.319 kb on + strand at 1405.325 kb on + strand at 1405.750 kb on + strand at 1405.750 kb on + strand at 1405.758 kb on + strand at 1405.758 kb on + strand at 1405.758 kb on + strand at 1405.758 kb on + strand at 1405.891 kb on + strand at 1405.987 kb on + strand, within MPMX26_01332 at 1406.152 kb on + strand, within MPMX26_01332 at 1406.238 kb on + strand, within MPMX26_01332 at 1406.238 kb on + strand, within MPMX26_01332 at 1406.271 kb on + strand, within MPMX26_01332 at 1406.271 kb on + strand, within MPMX26_01332 at 1406.271 kb on + strand, within MPMX26_01332 at 1406.271 kb on + strand, within MPMX26_01332 at 1406.401 kb on + strand, within MPMX26_01332 at 1406.442 kb on + strand, within MPMX26_01332 at 1406.442 kb on + strand, within MPMX26_01332 at 1406.599 kb on + strand, within MPMX26_01332 at 1406.617 kb on + strand, within MPMX26_01332 at 1406.665 kb on + strand, within MPMX26_01332 at 1406.694 kb on + strand, within MPMX26_01332 at 1406.694 kb on + strand, within MPMX26_01332 at 1406.743 kb on + strand, within MPMX26_01332 at 1406.776 kb on + strand, within MPMX26_01332 at 1406.848 kb on + strand, within MPMX26_01332 at 1406.851 kb on + strand, within MPMX26_01332 at 1406.911 kb on + strand, within MPMX26_01332 at 1406.980 kb on + strand, within MPMX26_01332 at 1406.988 kb on + strand, within MPMX26_01332 at 1407.133 kb on + strand, within MPMX26_01332 at 1407.159 kb on + strand, within MPMX26_01332 at 1407.159 kb on + strand, within MPMX26_01332 at 1407.249 kb on + strand, within MPMX26_01332 at 1407.249 kb on + strand, within MPMX26_01332 at 1407.249 kb on + strand, within MPMX26_01332 at 1407.286 kb on + strand, within MPMX26_01332 at 1407.334 kb on + strand, within MPMX26_01332 at 1407.346 kb on + strand, within MPMX26_01332 at 1407.352 kb on + strand, within MPMX26_01332 at 1407.406 kb on + strand, within MPMX26_01332 at 1407.430 kb on + strand at 1407.447 kb on + strand at 1407.499 kb on + strand at 1407.793 kb on - strand, within MPMX26_01333
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (N) remove 1,404,888 + MPMX26_01330 0.40 +1.3 1,405,018 + MPMX26_01330 0.67 -0.4 1,405,288 + -2.0 1,405,288 + -2.9 1,405,319 + -3.3 1,405,319 + -3.9 1,405,325 + -4.7 1,405,750 + -0.4 1,405,750 + -2.2 1,405,758 + -2.3 1,405,758 + -2.8 1,405,758 + -1.9 1,405,758 + -1.6 1,405,891 + -2.1 1,405,987 + MPMX26_01332 0.14 -1.8 1,406,152 + MPMX26_01332 0.22 -1.2 1,406,238 + MPMX26_01332 0.27 -3.0 1,406,238 + MPMX26_01332 0.27 -0.1 1,406,271 + MPMX26_01332 0.29 -1.7 1,406,271 + MPMX26_01332 0.29 -0.9 1,406,271 + MPMX26_01332 0.29 -0.4 1,406,271 + MPMX26_01332 0.29 -1.7 1,406,401 + MPMX26_01332 0.36 +0.6 1,406,442 + MPMX26_01332 0.38 -0.1 1,406,442 + MPMX26_01332 0.38 -2.1 1,406,599 + MPMX26_01332 0.46 -1.7 1,406,617 + MPMX26_01332 0.47 -0.9 1,406,665 + MPMX26_01332 0.50 -1.9 1,406,694 + MPMX26_01332 0.51 -1.6 1,406,694 + MPMX26_01332 0.51 -2.6 1,406,743 + MPMX26_01332 0.54 -0.4 1,406,776 + MPMX26_01332 0.56 -0.6 1,406,848 + MPMX26_01332 0.60 -1.4 1,406,851 + MPMX26_01332 0.60 -2.7 1,406,911 + MPMX26_01332 0.63 -1.0 1,406,980 + MPMX26_01332 0.67 -2.4 1,406,988 + MPMX26_01332 0.67 -1.7 1,407,133 + MPMX26_01332 0.75 -1.4 1,407,159 + MPMX26_01332 0.76 -1.2 1,407,159 + MPMX26_01332 0.76 -0.5 1,407,249 + MPMX26_01332 0.81 -1.1 1,407,249 + MPMX26_01332 0.81 -1.7 1,407,249 + MPMX26_01332 0.81 -1.4 1,407,286 + MPMX26_01332 0.83 -1.4 1,407,334 + MPMX26_01332 0.86 -1.2 1,407,346 + MPMX26_01332 0.86 -0.8 1,407,352 + MPMX26_01332 0.87 -0.9 1,407,406 + MPMX26_01332 0.89 -2.3 1,407,430 + -0.7 1,407,447 + -0.1 1,407,499 + -3.3 1,407,793 - MPMX26_01333 0.27 +1.7
Or see this region's nucleotide sequence