Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01210

Experiment: L-Proline (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01208 and MPMX26_01209 are separated by 91 nucleotidesMPMX26_01209 and MPMX26_01210 are separated by 124 nucleotidesMPMX26_01210 and MPMX26_01211 overlap by 1 nucleotides MPMX26_01208: MPMX26_01208 - tRNA dimethylallyltransferase, at 1,282,809 to 1,283,753 _01208 MPMX26_01209: MPMX26_01209 - RNA-binding protein Hfq, at 1,283,845 to 1,284,393 _01209 MPMX26_01210: MPMX26_01210 - Chaperone SurA, at 1,284,518 to 1,285,828 _01210 MPMX26_01211: MPMX26_01211 - LPS-assembly protein LptD, at 1,285,828 to 1,288,278 _01211 Position (kb) 1284 1285 1286Strain fitness (log2 ratio) -3 -2 -1 0 1at 1283.710 kb on + strandat 1284.203 kb on + strand, within MPMX26_01209at 1284.224 kb on + strand, within MPMX26_01209at 1284.242 kb on + strand, within MPMX26_01209at 1284.276 kb on + strand, within MPMX26_01209at 1284.530 kb on - strandat 1284.530 kb on - strandat 1284.572 kb on - strandat 1284.665 kb on - strand, within MPMX26_01210at 1284.665 kb on - strand, within MPMX26_01210at 1284.665 kb on - strand, within MPMX26_01210at 1284.665 kb on - strand, within MPMX26_01210at 1284.686 kb on - strand, within MPMX26_01210at 1284.686 kb on - strand, within MPMX26_01210at 1284.731 kb on - strand, within MPMX26_01210at 1284.731 kb on - strand, within MPMX26_01210at 1284.731 kb on - strand, within MPMX26_01210at 1284.742 kb on - strand, within MPMX26_01210at 1284.775 kb on - strand, within MPMX26_01210at 1284.775 kb on - strand, within MPMX26_01210at 1284.783 kb on - strand, within MPMX26_01210at 1284.783 kb on - strand, within MPMX26_01210at 1284.783 kb on - strand, within MPMX26_01210at 1284.783 kb on - strand, within MPMX26_01210at 1284.783 kb on - strand, within MPMX26_01210at 1284.783 kb on - strand, within MPMX26_01210at 1284.783 kb on - strand, within MPMX26_01210at 1284.783 kb on - strand, within MPMX26_01210at 1284.783 kb on - strand, within MPMX26_01210at 1284.783 kb on - strand, within MPMX26_01210at 1284.783 kb on - strand, within MPMX26_01210at 1284.783 kb on - strand, within MPMX26_01210at 1284.789 kb on - strand, within MPMX26_01210at 1284.789 kb on - strand, within MPMX26_01210at 1284.789 kb on - strand, within MPMX26_01210at 1284.789 kb on - strand, within MPMX26_01210at 1284.789 kb on - strand, within MPMX26_01210at 1284.794 kb on - strand, within MPMX26_01210at 1284.795 kb on - strand, within MPMX26_01210at 1284.795 kb on - strand, within MPMX26_01210at 1284.795 kb on - strand, within MPMX26_01210at 1284.795 kb on - strand, within MPMX26_01210at 1284.795 kb on - strand, within MPMX26_01210at 1284.795 kb on - strand, within MPMX26_01210at 1284.795 kb on - strand, within MPMX26_01210at 1284.795 kb on - strand, within MPMX26_01210at 1284.795 kb on - strand, within MPMX26_01210at 1284.795 kb on - strand, within MPMX26_01210at 1284.795 kb on - strand, within MPMX26_01210at 1284.795 kb on - strand, within MPMX26_01210at 1284.795 kb on - strand, within MPMX26_01210at 1284.795 kb on - strand, within MPMX26_01210at 1284.795 kb on - strand, within MPMX26_01210at 1284.795 kb on - strand, within MPMX26_01210at 1284.795 kb on - strand, within MPMX26_01210at 1284.795 kb on - strand, within MPMX26_01210at 1284.810 kb on - strand, within MPMX26_01210at 1284.825 kb on - strand, within MPMX26_01210at 1284.856 kb on - strand, within MPMX26_01210at 1284.856 kb on - strand, within MPMX26_01210at 1284.856 kb on - strand, within MPMX26_01210at 1284.856 kb on - strand, within MPMX26_01210at 1284.871 kb on - strand, within MPMX26_01210at 1284.924 kb on - strand, within MPMX26_01210at 1284.939 kb on - strand, within MPMX26_01210at 1284.957 kb on - strand, within MPMX26_01210at 1284.968 kb on - strand, within MPMX26_01210at 1284.968 kb on - strand, within MPMX26_01210at 1285.029 kb on - strand, within MPMX26_01210at 1285.035 kb on - strand, within MPMX26_01210at 1285.035 kb on - strand, within MPMX26_01210at 1285.116 kb on - strand, within MPMX26_01210at 1285.116 kb on - strand, within MPMX26_01210at 1285.132 kb on - strand, within MPMX26_01210at 1285.137 kb on - strand, within MPMX26_01210at 1285.137 kb on - strand, within MPMX26_01210at 1285.138 kb on - strand, within MPMX26_01210at 1285.138 kb on - strand, within MPMX26_01210at 1285.138 kb on - strand, within MPMX26_01210at 1285.253 kb on - strand, within MPMX26_01210at 1285.255 kb on - strand, within MPMX26_01210at 1285.255 kb on - strand, within MPMX26_01210at 1285.289 kb on - strand, within MPMX26_01210at 1285.289 kb on - strand, within MPMX26_01210at 1285.296 kb on - strand, within MPMX26_01210at 1285.296 kb on - strand, within MPMX26_01210at 1285.298 kb on - strand, within MPMX26_01210at 1285.298 kb on - strand, within MPMX26_01210at 1285.298 kb on - strand, within MPMX26_01210at 1285.298 kb on - strand, within MPMX26_01210at 1285.303 kb on - strand, within MPMX26_01210at 1285.303 kb on - strand, within MPMX26_01210at 1285.303 kb on - strand, within MPMX26_01210at 1285.312 kb on - strand, within MPMX26_01210at 1285.313 kb on - strand, within MPMX26_01210at 1285.372 kb on - strand, within MPMX26_01210at 1285.437 kb on - strand, within MPMX26_01210at 1285.460 kb on - strand, within MPMX26_01210at 1285.460 kb on - strand, within MPMX26_01210at 1285.461 kb on - strand, within MPMX26_01210at 1285.514 kb on - strand, within MPMX26_01210at 1285.514 kb on - strand, within MPMX26_01210at 1285.514 kb on - strand, within MPMX26_01210at 1285.516 kb on - strand, within MPMX26_01210at 1285.516 kb on - strand, within MPMX26_01210at 1285.516 kb on - strand, within MPMX26_01210at 1285.540 kb on - strand, within MPMX26_01210at 1285.550 kb on - strand, within MPMX26_01210at 1285.550 kb on - strand, within MPMX26_01210at 1285.550 kb on - strand, within MPMX26_01210at 1285.550 kb on - strand, within MPMX26_01210at 1285.550 kb on - strand, within MPMX26_01210at 1285.605 kb on - strand, within MPMX26_01210at 1285.682 kb on - strand, within MPMX26_01210at 1285.682 kb on - strand, within MPMX26_01210at 1285.682 kb on - strand, within MPMX26_01210at 1285.743 kb on - strandat 1285.755 kb on - strandat 1285.755 kb on - strandat 1285.755 kb on - strandat 1285.762 kb on - strandat 1285.789 kb on - strandat 1285.789 kb on - strandat 1285.794 kb on - strandat 1285.834 kb on - strandat 1285.834 kb on - strandat 1285.846 kb on - strandat 1285.846 kb on - strandat 1285.846 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline (N)
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1,283,710 + -1.6
1,284,203 + MPMX26_01209 0.65 -2.3
1,284,224 + MPMX26_01209 0.69 -1.3
1,284,242 + MPMX26_01209 0.72 -3.3
1,284,276 + MPMX26_01209 0.79 -0.1
1,284,530 - +0.1
1,284,530 - -0.0
1,284,572 - -0.0
1,284,665 - MPMX26_01210 0.11 -0.9
1,284,665 - MPMX26_01210 0.11 +0.4
1,284,665 - MPMX26_01210 0.11 -0.2
1,284,665 - MPMX26_01210 0.11 -0.5
1,284,686 - MPMX26_01210 0.13 +0.0
1,284,686 - MPMX26_01210 0.13 +0.1
1,284,731 - MPMX26_01210 0.16 -0.1
1,284,731 - MPMX26_01210 0.16 -0.0
1,284,731 - MPMX26_01210 0.16 -0.1
1,284,742 - MPMX26_01210 0.17 -0.2
1,284,775 - MPMX26_01210 0.20 +0.4
1,284,775 - MPMX26_01210 0.20 +0.5
1,284,783 - MPMX26_01210 0.20 +0.0
1,284,783 - MPMX26_01210 0.20 -0.3
1,284,783 - MPMX26_01210 0.20 -0.7
1,284,783 - MPMX26_01210 0.20 +0.6
1,284,783 - MPMX26_01210 0.20 +0.1
1,284,783 - MPMX26_01210 0.20 +0.2
1,284,783 - MPMX26_01210 0.20 +0.3
1,284,783 - MPMX26_01210 0.20 -0.2
1,284,783 - MPMX26_01210 0.20 +0.9
1,284,783 - MPMX26_01210 0.20 +0.1
1,284,783 - MPMX26_01210 0.20 -0.5
1,284,783 - MPMX26_01210 0.20 +0.3
1,284,789 - MPMX26_01210 0.21 +0.0
1,284,789 - MPMX26_01210 0.21 +0.4
1,284,789 - MPMX26_01210 0.21 -0.2
1,284,789 - MPMX26_01210 0.21 -0.1
1,284,789 - MPMX26_01210 0.21 -0.1
1,284,794 - MPMX26_01210 0.21 -0.0
1,284,795 - MPMX26_01210 0.21 +0.4
1,284,795 - MPMX26_01210 0.21 -0.1
1,284,795 - MPMX26_01210 0.21 +0.3
1,284,795 - MPMX26_01210 0.21 +0.3
1,284,795 - MPMX26_01210 0.21 -0.1
1,284,795 - MPMX26_01210 0.21 -0.4
1,284,795 - MPMX26_01210 0.21 +0.8
1,284,795 - MPMX26_01210 0.21 +0.3
1,284,795 - MPMX26_01210 0.21 -2.2
1,284,795 - MPMX26_01210 0.21 +0.0
1,284,795 - MPMX26_01210 0.21 +0.1
1,284,795 - MPMX26_01210 0.21 -0.0
1,284,795 - MPMX26_01210 0.21 -0.4
1,284,795 - MPMX26_01210 0.21 -0.6
1,284,795 - MPMX26_01210 0.21 -1.0
1,284,795 - MPMX26_01210 0.21 -0.1
1,284,795 - MPMX26_01210 0.21 +0.2
1,284,795 - MPMX26_01210 0.21 +0.4
1,284,810 - MPMX26_01210 0.22 -0.8
1,284,825 - MPMX26_01210 0.23 -0.0
1,284,856 - MPMX26_01210 0.26 -0.1
1,284,856 - MPMX26_01210 0.26 +0.8
1,284,856 - MPMX26_01210 0.26 +0.3
1,284,856 - MPMX26_01210 0.26 +0.6
1,284,871 - MPMX26_01210 0.27 +0.2
1,284,924 - MPMX26_01210 0.31 -0.2
1,284,939 - MPMX26_01210 0.32 -0.2
1,284,957 - MPMX26_01210 0.33 +0.1
1,284,968 - MPMX26_01210 0.34 -1.7
1,284,968 - MPMX26_01210 0.34 +0.1
1,285,029 - MPMX26_01210 0.39 -0.1
1,285,035 - MPMX26_01210 0.39 -0.1
1,285,035 - MPMX26_01210 0.39 +0.1
1,285,116 - MPMX26_01210 0.46 -0.1
1,285,116 - MPMX26_01210 0.46 +0.1
1,285,132 - MPMX26_01210 0.47 -0.3
1,285,137 - MPMX26_01210 0.47 -0.1
1,285,137 - MPMX26_01210 0.47 -0.1
1,285,138 - MPMX26_01210 0.47 -0.4
1,285,138 - MPMX26_01210 0.47 -0.1
1,285,138 - MPMX26_01210 0.47 +1.0
1,285,253 - MPMX26_01210 0.56 +0.1
1,285,255 - MPMX26_01210 0.56 +0.2
1,285,255 - MPMX26_01210 0.56 -0.5
1,285,289 - MPMX26_01210 0.59 -0.2
1,285,289 - MPMX26_01210 0.59 -0.2
1,285,296 - MPMX26_01210 0.59 -0.1
1,285,296 - MPMX26_01210 0.59 -0.8
1,285,298 - MPMX26_01210 0.59 +0.1
1,285,298 - MPMX26_01210 0.59 -0.2
1,285,298 - MPMX26_01210 0.59 -0.2
1,285,298 - MPMX26_01210 0.59 +0.0
1,285,303 - MPMX26_01210 0.60 -1.0
1,285,303 - MPMX26_01210 0.60 +1.0
1,285,303 - MPMX26_01210 0.60 -0.0
1,285,312 - MPMX26_01210 0.61 -0.7
1,285,313 - MPMX26_01210 0.61 +0.1
1,285,372 - MPMX26_01210 0.65 -0.0
1,285,437 - MPMX26_01210 0.70 +0.9
1,285,460 - MPMX26_01210 0.72 +0.1
1,285,460 - MPMX26_01210 0.72 -0.0
1,285,461 - MPMX26_01210 0.72 +0.5
1,285,514 - MPMX26_01210 0.76 +0.9
1,285,514 - MPMX26_01210 0.76 +0.4
1,285,514 - MPMX26_01210 0.76 -0.0
1,285,516 - MPMX26_01210 0.76 -0.0
1,285,516 - MPMX26_01210 0.76 +0.1
1,285,516 - MPMX26_01210 0.76 -0.2
1,285,540 - MPMX26_01210 0.78 -0.2
1,285,550 - MPMX26_01210 0.79 +0.2
1,285,550 - MPMX26_01210 0.79 +0.2
1,285,550 - MPMX26_01210 0.79 +0.1
1,285,550 - MPMX26_01210 0.79 -0.8
1,285,550 - MPMX26_01210 0.79 -0.2
1,285,605 - MPMX26_01210 0.83 +0.4
1,285,682 - MPMX26_01210 0.89 +0.8
1,285,682 - MPMX26_01210 0.89 +0.4
1,285,682 - MPMX26_01210 0.89 +0.5
1,285,743 - -0.1
1,285,755 - -0.2
1,285,755 - +0.1
1,285,755 - +0.3
1,285,762 - +0.3
1,285,789 - +0.0
1,285,789 - +0.1
1,285,794 - +0.5
1,285,834 - -0.2
1,285,834 - +0.3
1,285,846 - -1.4
1,285,846 - -0.0
1,285,846 - -0.2

Or see this region's nucleotide sequence