Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01060

Experiment: L-Proline (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01059 and MPMX26_01060 are separated by 247 nucleotidesMPMX26_01060 and MPMX26_01061 are separated by 2 nucleotidesMPMX26_01061 and MPMX26_01062 are separated by 159 nucleotides MPMX26_01059: MPMX26_01059 - Lon protease, at 1,121,771 to 1,124,404 _01059 MPMX26_01060: MPMX26_01060 - hypothetical protein, at 1,124,652 to 1,126,739 _01060 MPMX26_01061: MPMX26_01061 - Lactoylglutathione lyase, at 1,126,742 to 1,127,143 _01061 MPMX26_01062: MPMX26_01062 - hypothetical protein, at 1,127,303 to 1,128,304 _01062 Position (kb) 1124 1125 1126 1127Strain fitness (log2 ratio) -2 -1 0 1 2at 1123.688 kb on - strand, within MPMX26_01059at 1123.688 kb on - strand, within MPMX26_01059at 1123.739 kb on - strand, within MPMX26_01059at 1123.895 kb on - strand, within MPMX26_01059at 1123.915 kb on - strand, within MPMX26_01059at 1123.937 kb on - strand, within MPMX26_01059at 1123.937 kb on - strand, within MPMX26_01059at 1123.942 kb on - strand, within MPMX26_01059at 1124.030 kb on - strand, within MPMX26_01059at 1124.042 kb on - strand, within MPMX26_01059at 1124.047 kb on - strand, within MPMX26_01059at 1124.048 kb on - strand, within MPMX26_01059at 1124.048 kb on - strand, within MPMX26_01059at 1124.072 kb on - strand, within MPMX26_01059at 1124.087 kb on - strand, within MPMX26_01059at 1124.098 kb on - strand, within MPMX26_01059at 1124.098 kb on - strand, within MPMX26_01059at 1124.098 kb on - strand, within MPMX26_01059at 1124.108 kb on - strand, within MPMX26_01059at 1124.108 kb on - strand, within MPMX26_01059at 1124.108 kb on - strand, within MPMX26_01059at 1124.108 kb on - strand, within MPMX26_01059at 1124.108 kb on - strand, within MPMX26_01059at 1124.138 kb on - strand, within MPMX26_01059at 1124.138 kb on - strand, within MPMX26_01059at 1124.138 kb on - strand, within MPMX26_01059at 1124.138 kb on - strand, within MPMX26_01059at 1124.138 kb on - strand, within MPMX26_01059at 1124.143 kb on - strandat 1124.143 kb on - strandat 1124.158 kb on - strandat 1124.170 kb on - strandat 1124.182 kb on - strandat 1124.257 kb on - strandat 1124.270 kb on - strandat 1124.314 kb on - strandat 1124.327 kb on - strandat 1124.720 kb on + strandat 1124.769 kb on + strandat 1124.769 kb on + strandat 1124.769 kb on + strandat 1124.769 kb on + strandat 1124.769 kb on + strandat 1124.802 kb on + strandat 1124.879 kb on + strand, within MPMX26_01060at 1124.879 kb on + strand, within MPMX26_01060at 1124.879 kb on + strand, within MPMX26_01060at 1124.879 kb on + strand, within MPMX26_01060at 1124.879 kb on + strand, within MPMX26_01060at 1125.051 kb on + strand, within MPMX26_01060at 1125.185 kb on + strand, within MPMX26_01060at 1125.185 kb on + strand, within MPMX26_01060at 1125.185 kb on + strand, within MPMX26_01060at 1125.213 kb on + strand, within MPMX26_01060at 1125.225 kb on + strand, within MPMX26_01060at 1125.279 kb on + strand, within MPMX26_01060at 1125.384 kb on + strand, within MPMX26_01060at 1125.450 kb on + strand, within MPMX26_01060at 1125.452 kb on + strand, within MPMX26_01060at 1125.777 kb on + strand, within MPMX26_01060at 1125.777 kb on + strand, within MPMX26_01060at 1125.777 kb on + strand, within MPMX26_01060at 1125.777 kb on + strand, within MPMX26_01060at 1125.777 kb on + strand, within MPMX26_01060at 1125.787 kb on + strand, within MPMX26_01060at 1125.815 kb on + strand, within MPMX26_01060at 1125.912 kb on + strand, within MPMX26_01060at 1125.969 kb on + strand, within MPMX26_01060at 1125.983 kb on + strand, within MPMX26_01060at 1125.983 kb on + strand, within MPMX26_01060at 1125.983 kb on + strand, within MPMX26_01060at 1125.983 kb on + strand, within MPMX26_01060at 1125.984 kb on + strand, within MPMX26_01060at 1125.992 kb on + strand, within MPMX26_01060at 1126.506 kb on + strand, within MPMX26_01060at 1126.506 kb on + strand, within MPMX26_01060at 1126.639 kb on + strandat 1126.725 kb on + strandat 1126.751 kb on + strandat 1126.753 kb on + strandat 1126.762 kb on + strandat 1126.776 kb on + strandat 1126.776 kb on + strandat 1126.776 kb on + strandat 1126.795 kb on + strand, within MPMX26_01061at 1126.800 kb on + strand, within MPMX26_01061at 1126.800 kb on + strand, within MPMX26_01061at 1126.800 kb on + strand, within MPMX26_01061at 1126.800 kb on + strand, within MPMX26_01061at 1126.800 kb on + strand, within MPMX26_01061at 1126.800 kb on + strand, within MPMX26_01061at 1126.800 kb on + strand, within MPMX26_01061at 1126.839 kb on + strand, within MPMX26_01061at 1126.891 kb on + strand, within MPMX26_01061at 1126.891 kb on + strand, within MPMX26_01061at 1126.894 kb on + strand, within MPMX26_01061at 1126.896 kb on + strand, within MPMX26_01061at 1126.901 kb on + strand, within MPMX26_01061at 1126.901 kb on + strand, within MPMX26_01061at 1126.901 kb on + strand, within MPMX26_01061at 1126.903 kb on + strand, within MPMX26_01061at 1126.908 kb on + strand, within MPMX26_01061at 1126.935 kb on + strand, within MPMX26_01061at 1126.935 kb on + strand, within MPMX26_01061at 1126.945 kb on + strand, within MPMX26_01061at 1126.961 kb on + strand, within MPMX26_01061at 1126.973 kb on + strand, within MPMX26_01061at 1126.976 kb on + strand, within MPMX26_01061at 1126.982 kb on + strand, within MPMX26_01061at 1126.987 kb on + strand, within MPMX26_01061at 1127.019 kb on + strand, within MPMX26_01061at 1127.019 kb on + strand, within MPMX26_01061at 1127.022 kb on + strand, within MPMX26_01061at 1127.038 kb on + strand, within MPMX26_01061at 1127.048 kb on + strand, within MPMX26_01061at 1127.086 kb on + strand, within MPMX26_01061at 1127.101 kb on + strand, within MPMX26_01061at 1127.563 kb on + strand, within MPMX26_01062

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline (N)
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1,123,688 - MPMX26_01059 0.73 -0.9
1,123,688 - MPMX26_01059 0.73 +0.1
1,123,739 - MPMX26_01059 0.75 +0.6
1,123,895 - MPMX26_01059 0.81 +0.7
1,123,915 - MPMX26_01059 0.81 -0.3
1,123,937 - MPMX26_01059 0.82 +0.4
1,123,937 - MPMX26_01059 0.82 -0.3
1,123,942 - MPMX26_01059 0.82 +0.3
1,124,030 - MPMX26_01059 0.86 +0.5
1,124,042 - MPMX26_01059 0.86 -1.0
1,124,047 - MPMX26_01059 0.86 -0.1
1,124,048 - MPMX26_01059 0.86 -0.1
1,124,048 - MPMX26_01059 0.86 -0.0
1,124,072 - MPMX26_01059 0.87 -0.2
1,124,087 - MPMX26_01059 0.88 -0.0
1,124,098 - MPMX26_01059 0.88 +0.7
1,124,098 - MPMX26_01059 0.88 +0.4
1,124,098 - MPMX26_01059 0.88 +0.4
1,124,108 - MPMX26_01059 0.89 +0.7
1,124,108 - MPMX26_01059 0.89 -0.0
1,124,108 - MPMX26_01059 0.89 +0.3
1,124,108 - MPMX26_01059 0.89 +0.0
1,124,108 - MPMX26_01059 0.89 -0.2
1,124,138 - MPMX26_01059 0.90 -0.0
1,124,138 - MPMX26_01059 0.90 +0.5
1,124,138 - MPMX26_01059 0.90 -0.2
1,124,138 - MPMX26_01059 0.90 -0.5
1,124,138 - MPMX26_01059 0.90 +0.7
1,124,143 - +0.2
1,124,143 - -0.3
1,124,158 - -0.2
1,124,170 - +0.9
1,124,182 - +0.4
1,124,257 - -0.2
1,124,270 - +0.0
1,124,314 - +0.2
1,124,327 - -0.6
1,124,720 + -0.2
1,124,769 + +0.8
1,124,769 + +0.1
1,124,769 + -0.5
1,124,769 + +0.7
1,124,769 + -0.6
1,124,802 + +0.8
1,124,879 + MPMX26_01060 0.11 +0.1
1,124,879 + MPMX26_01060 0.11 -1.1
1,124,879 + MPMX26_01060 0.11 +0.6
1,124,879 + MPMX26_01060 0.11 +1.4
1,124,879 + MPMX26_01060 0.11 -1.5
1,125,051 + MPMX26_01060 0.19 +0.1
1,125,185 + MPMX26_01060 0.26 -0.5
1,125,185 + MPMX26_01060 0.26 -0.9
1,125,185 + MPMX26_01060 0.26 -1.8
1,125,213 + MPMX26_01060 0.27 +0.3
1,125,225 + MPMX26_01060 0.27 -0.8
1,125,279 + MPMX26_01060 0.30 -0.4
1,125,384 + MPMX26_01060 0.35 -1.6
1,125,450 + MPMX26_01060 0.38 -0.7
1,125,452 + MPMX26_01060 0.38 -0.9
1,125,777 + MPMX26_01060 0.54 -0.0
1,125,777 + MPMX26_01060 0.54 +0.2
1,125,777 + MPMX26_01060 0.54 -0.5
1,125,777 + MPMX26_01060 0.54 -0.2
1,125,777 + MPMX26_01060 0.54 -0.3
1,125,787 + MPMX26_01060 0.54 +0.0
1,125,815 + MPMX26_01060 0.56 +0.0
1,125,912 + MPMX26_01060 0.60 -0.4
1,125,969 + MPMX26_01060 0.63 -0.0
1,125,983 + MPMX26_01060 0.64 +0.3
1,125,983 + MPMX26_01060 0.64 -1.2
1,125,983 + MPMX26_01060 0.64 -0.9
1,125,983 + MPMX26_01060 0.64 +0.1
1,125,984 + MPMX26_01060 0.64 -0.7
1,125,992 + MPMX26_01060 0.64 +0.0
1,126,506 + MPMX26_01060 0.89 +0.4
1,126,506 + MPMX26_01060 0.89 +1.9
1,126,639 + -0.7
1,126,725 + +0.5
1,126,751 + +0.7
1,126,753 + +0.1
1,126,762 + +0.3
1,126,776 + -0.8
1,126,776 + +0.2
1,126,776 + +0.4
1,126,795 + MPMX26_01061 0.13 -0.1
1,126,800 + MPMX26_01061 0.14 +0.2
1,126,800 + MPMX26_01061 0.14 +0.1
1,126,800 + MPMX26_01061 0.14 -0.7
1,126,800 + MPMX26_01061 0.14 +0.6
1,126,800 + MPMX26_01061 0.14 +0.3
1,126,800 + MPMX26_01061 0.14 +0.7
1,126,800 + MPMX26_01061 0.14 +1.7
1,126,839 + MPMX26_01061 0.24 +0.0
1,126,891 + MPMX26_01061 0.37 -0.1
1,126,891 + MPMX26_01061 0.37 +0.3
1,126,894 + MPMX26_01061 0.38 +0.2
1,126,896 + MPMX26_01061 0.38 -0.1
1,126,901 + MPMX26_01061 0.40 +0.2
1,126,901 + MPMX26_01061 0.40 +0.2
1,126,901 + MPMX26_01061 0.40 -0.0
1,126,903 + MPMX26_01061 0.40 -0.1
1,126,908 + MPMX26_01061 0.41 +0.5
1,126,935 + MPMX26_01061 0.48 +0.7
1,126,935 + MPMX26_01061 0.48 +1.8
1,126,945 + MPMX26_01061 0.50 +0.3
1,126,961 + MPMX26_01061 0.54 +0.5
1,126,973 + MPMX26_01061 0.57 -0.1
1,126,976 + MPMX26_01061 0.58 +0.2
1,126,982 + MPMX26_01061 0.60 -0.1
1,126,987 + MPMX26_01061 0.61 +0.3
1,127,019 + MPMX26_01061 0.69 +0.7
1,127,019 + MPMX26_01061 0.69 +0.7
1,127,022 + MPMX26_01061 0.70 -1.2
1,127,038 + MPMX26_01061 0.74 -0.1
1,127,048 + MPMX26_01061 0.76 -0.5
1,127,086 + MPMX26_01061 0.86 +0.1
1,127,101 + MPMX26_01061 0.89 -0.0
1,127,563 + MPMX26_01062 0.26 +0.6

Or see this region's nucleotide sequence