Experiment: L-Proline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_00989 and MPMX26_00990 are separated by 106 nucleotides MPMX26_00990 and MPMX26_00991 are separated by 53 nucleotides MPMX26_00991 and MPMX26_00992 are separated by 37 nucleotides MPMX26_00992 and MPMX26_00993 are separated by 57 nucleotides
MPMX26_00989: MPMX26_00989 - 4-hydroxybenzoate octaprenyltransferase, at 1,041,702 to 1,042,583
_00989
MPMX26_00990: MPMX26_00990 - hypothetical protein, at 1,042,690 to 1,043,997
_00990
MPMX26_00991: MPMX26_00991 - hypothetical protein, at 1,044,051 to 1,044,299
_00991
MPMX26_00992: MPMX26_00992 - hypothetical protein, at 1,044,337 to 1,044,780
_00992
MPMX26_00993: MPMX26_00993 - tRNA-Asn, at 1,044,838 to 1,044,913
_00993
Position (kb) 1042
1043
1044 Strain fitness (log2 ratio) -1
0
1 at 1041.699 kb on + strand at 1043.184 kb on + strand, within MPMX26_00990 at 1043.844 kb on + strand, within MPMX26_00990 at 1044.168 kb on + strand, within MPMX26_00991 at 1044.182 kb on + strand, within MPMX26_00991 at 1044.182 kb on + strand, within MPMX26_00991
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (N) remove 1,041,699 + -0.6 1,043,184 + MPMX26_00990 0.38 -0.5 1,043,844 + MPMX26_00990 0.88 +0.7 1,044,168 + MPMX26_00991 0.47 -0.4 1,044,182 + MPMX26_00991 0.53 -0.2 1,044,182 + MPMX26_00991 0.53 -0.1
Or see this region's nucleotide sequence