Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4633

Experiment: Ying_Others16 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 2
1,583,501	+				-0.4
1,583,501	+				-0.8
1,583,501	+				-0.1
1,583,501	+				+0.4
1,583,502	-				-1.5
1,583,502	-				-1.9
1,583,509	+				+0.2
1,583,510	-				+0.4
1,583,510	-				-1.0
1,583,510	-				+1.5
1,583,510	-				+0.1
1,583,510	-				-0.9
1,583,510	-				+0.2
1,583,510	-				-0.6
1,583,510	-				-0.1
1,583,510	-				-0.6
1,583,510	-				+1.1
1,583,721	+		GFF4631	0.32	-0.4
1,583,721	+		GFF4631	0.32	+0.8
1,583,721	+		GFF4631	0.32	+0.5
1,583,721	+		GFF4631	0.32	-1.2
1,583,721	+		GFF4631	0.32	+0.3
1,583,722	-		GFF4631	0.32	+0.6
1,583,722	-		GFF4631	0.32	-0.6
1,583,722	-		GFF4631	0.32	+0.1
1,583,724	+		GFF4631	0.33	-0.1
1,583,725	-		GFF4631	0.33	-0.5
1,583,854	+		GFF4631	0.70	-0.2
1,583,888	-		GFF4631	0.79	+0.2
1,583,888	-		GFF4631	0.79	+0.1
1,583,959	+				-0.6
1,583,960	-				+0.3
1,584,374	+				+0.5
1,584,374	+				-1.7
1,584,374	+				-0.3
1,584,375	-				+0.0
1,584,375	-				-0.1
1,584,375	-				+0.2
1,584,409	-		GFF4633	0.10	+0.1
1,584,409	-		GFF4633	0.10	+0.0
1,584,581	-		GFF4633	0.37	-0.8
1,584,753	-		GFF4633	0.64	-0.2
1,584,972	+				-0.6
1,584,972	+				-0.5
1,584,973	-				-0.3
1,584,973	-				+1.0
1,584,973	-				+1.2
1,584,973	-				+0.0
1,584,973	-				-0.2
1,584,973	-				+0.0
1,584,973	-				-0.1
1,585,019	+				-1.2
1,585,019	+				-0.9
1,585,020	-				+0.7
1,585,020	-				-0.5
1,585,020	-				+1.1
1,585,134	+				+0.5
1,585,135	-				+0.1
1,585,135	-				+0.2
1,585,290	+		GFF4634	0.23	-0.6
1,585,290	+		GFF4634	0.23	+0.9
1,585,290	+		GFF4634	0.23	-1.0
1,585,291	-		GFF4634	0.24	-0.1
1,585,291	-		GFF4634	0.24	-1.5
1,585,302	+		GFF4634	0.25	-0.3
1,585,542	+		GFF4634	0.49	-0.1
1,585,542	+		GFF4634	0.49	-0.1
1,585,543	-		GFF4634	0.49	-1.3
1,585,758	+		GFF4634	0.71	+0.2
1,585,758	+		GFF4634	0.71	+0.3
1,585,758	+		GFF4634	0.71	-0.7
1,585,759	-		GFF4634	0.71	+0.1
1,585,759	-		GFF4634	0.71	-1.0
1,585,759	-		GFF4634	0.71	-0.2
1,585,759	-		GFF4634	0.71	+0.0
1,585,759	-		GFF4634	0.71	+0.7
1,585,779	+		GFF4634	0.73	+0.2
1,585,779	+		GFF4634	0.73	-0.3
1,585,780	-		GFF4634	0.73	-0.5
1,585,780	-		GFF4634	0.73	+0.3
1,585,780	-		GFF4634	0.73	+0.6
1,585,926	+		GFF4634	0.88	+0.8
1,585,926	+		GFF4634	0.88	+1.0
1,585,926	+		GFF4634	0.88	-0.4
1,585,927	-		GFF4634	0.88	-0.1
1,585,927	-		GFF4634	0.88	+0.3
1,585,927	-		GFF4634	0.88	-1.0
1,585,927	-		GFF4634	0.88	-0.6