Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4614

Experiment: Ying_Others16 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 2
1,559,576	+				-0.2
1,559,576	+				-0.7
1,559,576	+				-0.8
1,559,576	+				+0.6
1,559,576	+				-0.4
1,559,576	+				+0.8
1,559,576	+				-0.4
1,559,576	+				-0.4
1,559,576	+				+0.5
1,559,576	+				+0.7
1,559,577	-				-0.2
1,559,577	-				-0.1
1,559,577	-				-0.3
1,559,577	-				-0.2
1,559,577	-				-0.1
1,559,577	-				+0.6
1,559,577	-				-0.2
1,559,577	-				-0.2
1,559,577	-				+0.2
1,559,577	-				-0.1
1,559,577	-				-0.2
1,559,577	-				+0.3
1,559,577	-				+0.7
1,559,675	+				-1.2
1,559,675	+				-0.5
1,559,675	+				-0.4
1,559,675	+				-0.2
1,559,675	+				-0.4
1,559,676	-				-0.5
1,559,676	-				-0.1
1,559,750	+				+0.2
1,559,751	-				-0.8
1,559,843	+		GFF4613	0.10	+0.5
1,559,843	+		GFF4613	0.10	-1.0
1,559,843	+		GFF4613	0.10	-0.7
1,559,843	+		GFF4613	0.10	-0.2
1,559,844	-		GFF4613	0.10	+0.5
1,559,866	+		GFF4613	0.13	+0.5
1,559,866	+		GFF4613	0.13	+0.3
1,559,867	-		GFF4613	0.13	-0.3
1,559,893	+		GFF4613	0.16	+0.5
1,559,893	+		GFF4613	0.16	-0.1
1,559,893	+		GFF4613	0.16	+0.2
1,559,893	+		GFF4613	0.16	-0.0
1,559,894	-		GFF4613	0.17	-0.0
1,559,894	-		GFF4613	0.17	-0.2
1,559,897	+		GFF4613	0.17	+0.4
1,559,897	+		GFF4613	0.17	+0.2
1,559,897	+		GFF4613	0.17	+1.0
1,559,898	-		GFF4613	0.17	-0.3
1,559,898	-		GFF4613	0.17	+1.1
1,559,962	+		GFF4613	0.25	+0.3
1,559,963	-		GFF4613	0.26	+0.9
1,560,267	-		GFF4613	0.65	-0.3
1,560,304	+		GFF4613	0.70	-0.4
1,560,305	-		GFF4613	0.70	-0.3
1,560,336	-		GFF4613	0.74	+0.2
1,560,446	-		GFF4613	0.88	+0.0
1,560,446	-		GFF4613	0.88	-0.4
1,560,581	+				-0.4
1,560,581	+				-0.9
1,560,582	-				-0.0
1,560,582	-				+0.5
1,560,582	-				-0.6
1,560,617	+				+0.1
1,560,617	+				-0.1
1,560,618	-				-0.2
1,560,618	-				+0.5
1,560,998	+		GFF4614	0.41	-0.9
1,560,999	-		GFF4614	0.41	-0.1
1,560,999	-		GFF4614	0.41	+0.0
1,561,002	+		GFF4614	0.41	-0.1
1,561,002	+		GFF4614	0.41	+1.0
1,561,002	+		GFF4614	0.41	+0.1
1,561,002	+		GFF4614	0.41	-0.0
1,561,003	-		GFF4614	0.41	-0.3
1,561,008	+		GFF4614	0.42	+0.2
1,561,009	-		GFF4614	0.42	+0.4
1,561,009	-		GFF4614	0.42	-0.3
1,561,024	+		GFF4614	0.43	-0.1
1,561,025	-		GFF4614	0.43	+0.3
1,561,392	-		GFF4614	0.76	-0.3
1,561,430	+		GFF4614	0.79	-0.1
1,561,431	-		GFF4614	0.79	-0.4
1,561,476	+		GFF4614	0.83	-0.4
1,561,476	+		GFF4614	0.83	+0.1
1,561,477	-		GFF4614	0.83	+0.3
1,561,477	-		GFF4614	0.83	+0.6
1,561,640	-				+1.1
1,561,640	-				+0.3
1,561,705	-				-0.2
1,561,718	-				+1.3
1,561,742	-				-0.2
1,561,747	+				-0.3
1,562,052	+				-0.2
1,562,053	-				+0.4
1,562,226	-				-0.2
1,562,226	-				+1.3
1,562,226	-				+0.7
1,562,583	+				+0.1
1,562,584	-				-0.0
1,562,584	-				+0.0
1,562,612	+				+0.2
1,562,612	+				+0.6