Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3620

Experiment: Ying_Others16 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 2
507,226	+		GFF3619	0.42	+0.8
507,226	+		GFF3619	0.42	-1.2
507,227	-		GFF3619	0.42	+0.5
507,451	+		GFF3619	0.64	-0.3
507,452	-		GFF3619	0.65	-0.1
507,452	-		GFF3619	0.65	-0.1
507,452	-		GFF3619	0.65	-1.3
508,343	+		GFF3620	0.56	+0.6
508,344	-		GFF3620	0.57	+0.3
508,521	-		GFF3620	0.77	+0.2
508,521	-		GFF3620	0.77	+0.7
508,815	+				+1.3
509,457	+		GFF3621	0.66	+0.2
509,458	-		GFF3621	0.66	+0.3
509,458	-		GFF3621	0.66	-0.7
509,568	+		GFF3621	0.78	+0.0
509,569	-		GFF3621	0.79	+0.2