Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3054

Experiment: Ying_Others16 rep A; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 2
132,420	+		GFF3053	0.28	-0.1
132,421	-		GFF3053	0.28	-0.1
133,510	+		GFF3054	0.45	-0.1
133,613	-		GFF3054	0.57	+0.3
133,943	-				-0.5
133,962	+				+0.4
134,433	+		GFF3055	0.40	+0.6
134,529	+		GFF3055	0.48	-1.3
134,529	+		GFF3055	0.48	+0.0
134,530	-		GFF3055	0.48	+0.2
134,530	-		GFF3055	0.48	+0.5
134,530	-		GFF3055	0.48	+0.1
134,530	-		GFF3055	0.48	+0.1
134,784	+		GFF3055	0.69	+0.4