Experiment: L-Proline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02987 and MPMX26_02988 are separated by 143 nucleotides MPMX26_02988 and MPMX26_02989 are separated by 130 nucleotides MPMX26_02989 and MPMX26_02990 are separated by 72 nucleotides
MPMX26_02987: MPMX26_02987 - Replication-associated recombination protein A, at 3,104,701 to 3,105,972
_02987
MPMX26_02988: MPMX26_02988 - Aldose sugar dehydrogenase YliI, at 3,106,116 to 3,107,288
_02988
MPMX26_02989: MPMX26_02989 - HTH-type transcriptional regulator CueR, at 3,107,419 to 3,107,823
_02989
MPMX26_02990: MPMX26_02990 - hypothetical protein, at 3,107,896 to 3,108,513
_02990
Position (kb)
3106
3107
3108 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3105.128 kb on - strand, within MPMX26_02987 at 3105.136 kb on - strand, within MPMX26_02987 at 3105.181 kb on - strand, within MPMX26_02987 at 3105.181 kb on - strand, within MPMX26_02987 at 3105.181 kb on - strand, within MPMX26_02987 at 3105.181 kb on - strand, within MPMX26_02987 at 3105.189 kb on - strand, within MPMX26_02987 at 3105.204 kb on - strand, within MPMX26_02987 at 3105.204 kb on - strand, within MPMX26_02987 at 3105.300 kb on - strand, within MPMX26_02987 at 3105.308 kb on - strand, within MPMX26_02987 at 3105.313 kb on - strand, within MPMX26_02987 at 3105.420 kb on - strand, within MPMX26_02987 at 3105.501 kb on - strand, within MPMX26_02987 at 3105.535 kb on - strand, within MPMX26_02987 at 3105.535 kb on - strand, within MPMX26_02987 at 3105.565 kb on - strand, within MPMX26_02987 at 3105.565 kb on - strand, within MPMX26_02987 at 3105.694 kb on - strand, within MPMX26_02987 at 3105.745 kb on - strand, within MPMX26_02987 at 3105.748 kb on - strand, within MPMX26_02987 at 3105.768 kb on - strand, within MPMX26_02987 at 3105.814 kb on - strand, within MPMX26_02987 at 3105.819 kb on - strand, within MPMX26_02987 at 3105.830 kb on - strand, within MPMX26_02987 at 3105.837 kb on - strand, within MPMX26_02987 at 3105.861 kb on - strand at 3105.861 kb on - strand at 3105.861 kb on - strand at 3105.866 kb on - strand at 3105.876 kb on - strand at 3105.895 kb on - strand at 3105.932 kb on - strand at 3105.932 kb on - strand at 3105.937 kb on - strand at 3105.949 kb on - strand at 3105.955 kb on - strand at 3105.982 kb on + strand at 3106.058 kb on - strand at 3106.058 kb on - strand at 3106.171 kb on - strand at 3106.190 kb on - strand at 3106.190 kb on - strand at 3106.190 kb on - strand at 3106.190 kb on - strand at 3106.269 kb on + strand, within MPMX26_02988 at 3106.372 kb on + strand, within MPMX26_02988 at 3106.511 kb on - strand, within MPMX26_02988 at 3106.617 kb on - strand, within MPMX26_02988 at 3106.619 kb on - strand, within MPMX26_02988 at 3106.622 kb on - strand, within MPMX26_02988 at 3106.670 kb on - strand, within MPMX26_02988 at 3106.721 kb on + strand, within MPMX26_02988 at 3106.729 kb on - strand, within MPMX26_02988 at 3106.729 kb on - strand, within MPMX26_02988 at 3106.740 kb on - strand, within MPMX26_02988 at 3106.787 kb on - strand, within MPMX26_02988 at 3106.838 kb on + strand, within MPMX26_02988 at 3106.848 kb on + strand, within MPMX26_02988 at 3106.851 kb on - strand, within MPMX26_02988 at 3106.851 kb on - strand, within MPMX26_02988 at 3106.856 kb on - strand, within MPMX26_02988 at 3106.856 kb on - strand, within MPMX26_02988 at 3106.856 kb on - strand, within MPMX26_02988 at 3106.856 kb on - strand, within MPMX26_02988 at 3106.856 kb on - strand, within MPMX26_02988 at 3106.856 kb on - strand, within MPMX26_02988 at 3106.856 kb on - strand, within MPMX26_02988 at 3106.856 kb on - strand, within MPMX26_02988 at 3106.856 kb on - strand, within MPMX26_02988 at 3106.856 kb on - strand, within MPMX26_02988 at 3106.856 kb on - strand, within MPMX26_02988 at 3106.856 kb on - strand, within MPMX26_02988 at 3106.884 kb on - strand, within MPMX26_02988 at 3106.887 kb on - strand, within MPMX26_02988 at 3106.979 kb on - strand, within MPMX26_02988 at 3106.998 kb on - strand, within MPMX26_02988 at 3107.049 kb on - strand, within MPMX26_02988 at 3107.197 kb on + strand at 3107.205 kb on - strand at 3107.205 kb on - strand at 3107.205 kb on - strand at 3107.205 kb on - strand at 3107.229 kb on + strand at 3107.431 kb on - strand at 3107.466 kb on - strand, within MPMX26_02989 at 3107.466 kb on - strand, within MPMX26_02989 at 3107.466 kb on - strand, within MPMX26_02989 at 3107.466 kb on - strand, within MPMX26_02989 at 3107.493 kb on - strand, within MPMX26_02989 at 3107.562 kb on - strand, within MPMX26_02989 at 3107.590 kb on - strand, within MPMX26_02989 at 3107.590 kb on - strand, within MPMX26_02989 at 3107.590 kb on - strand, within MPMX26_02989 at 3107.590 kb on - strand, within MPMX26_02989 at 3107.665 kb on - strand, within MPMX26_02989 at 3107.680 kb on - strand, within MPMX26_02989 at 3107.818 kb on - strand at 3107.850 kb on + strand at 3107.907 kb on + strand at 3107.953 kb on + strand at 3107.958 kb on + strand, within MPMX26_02990 at 3108.038 kb on + strand, within MPMX26_02990 at 3108.101 kb on + strand, within MPMX26_02990 at 3108.106 kb on + strand, within MPMX26_02990 at 3108.172 kb on + strand, within MPMX26_02990 at 3108.186 kb on + strand, within MPMX26_02990 at 3108.186 kb on + strand, within MPMX26_02990 at 3108.192 kb on + strand, within MPMX26_02990 at 3108.192 kb on + strand, within MPMX26_02990 at 3108.194 kb on + strand, within MPMX26_02990 at 3108.200 kb on - strand, within MPMX26_02990 at 3108.274 kb on + strand, within MPMX26_02990 at 3108.274 kb on + strand, within MPMX26_02990
Per-strain Table
Position Strand Gene LocusTag Fraction L-Proline (N) remove 3,105,128 - MPMX26_02987 0.34 +0.4 3,105,136 - MPMX26_02987 0.34 -0.1 3,105,181 - MPMX26_02987 0.38 -0.5 3,105,181 - MPMX26_02987 0.38 +0.6 3,105,181 - MPMX26_02987 0.38 +0.5 3,105,181 - MPMX26_02987 0.38 -0.1 3,105,189 - MPMX26_02987 0.38 +0.1 3,105,204 - MPMX26_02987 0.40 -0.2 3,105,204 - MPMX26_02987 0.40 -0.4 3,105,300 - MPMX26_02987 0.47 +0.4 3,105,308 - MPMX26_02987 0.48 +0.5 3,105,313 - MPMX26_02987 0.48 +0.0 3,105,420 - MPMX26_02987 0.57 -0.3 3,105,501 - MPMX26_02987 0.63 -0.2 3,105,535 - MPMX26_02987 0.66 +0.5 3,105,535 - MPMX26_02987 0.66 -0.2 3,105,565 - MPMX26_02987 0.68 +0.2 3,105,565 - MPMX26_02987 0.68 +0.2 3,105,694 - MPMX26_02987 0.78 +0.0 3,105,745 - MPMX26_02987 0.82 +0.0 3,105,748 - MPMX26_02987 0.82 +0.1 3,105,768 - MPMX26_02987 0.84 +0.4 3,105,814 - MPMX26_02987 0.88 +0.5 3,105,819 - MPMX26_02987 0.88 +0.1 3,105,830 - MPMX26_02987 0.89 +1.0 3,105,837 - MPMX26_02987 0.89 +0.1 3,105,861 - +0.2 3,105,861 - -0.2 3,105,861 - +0.2 3,105,866 - +1.2 3,105,876 - -0.1 3,105,895 - -3.6 3,105,932 - -0.2 3,105,932 - -0.2 3,105,937 - -0.3 3,105,949 - -0.1 3,105,955 - +0.1 3,105,982 + -0.7 3,106,058 - -2.4 3,106,058 - +0.1 3,106,171 - +0.5 3,106,190 - -0.0 3,106,190 - -0.6 3,106,190 - -0.3 3,106,190 - -1.5 3,106,269 + MPMX26_02988 0.13 -1.3 3,106,372 + MPMX26_02988 0.22 +0.5 3,106,511 - MPMX26_02988 0.34 +0.0 3,106,617 - MPMX26_02988 0.43 +1.6 3,106,619 - MPMX26_02988 0.43 +0.5 3,106,622 - MPMX26_02988 0.43 +0.4 3,106,670 - MPMX26_02988 0.47 -1.7 3,106,721 + MPMX26_02988 0.52 -1.1 3,106,729 - MPMX26_02988 0.52 +0.3 3,106,729 - MPMX26_02988 0.52 +0.3 3,106,740 - MPMX26_02988 0.53 -1.0 3,106,787 - MPMX26_02988 0.57 -0.5 3,106,838 + MPMX26_02988 0.62 -0.2 3,106,848 + MPMX26_02988 0.62 +0.4 3,106,851 - MPMX26_02988 0.63 +0.8 3,106,851 - MPMX26_02988 0.63 -0.4 3,106,856 - MPMX26_02988 0.63 +1.4 3,106,856 - MPMX26_02988 0.63 +0.0 3,106,856 - MPMX26_02988 0.63 +2.1 3,106,856 - MPMX26_02988 0.63 -0.5 3,106,856 - MPMX26_02988 0.63 -0.3 3,106,856 - MPMX26_02988 0.63 -0.3 3,106,856 - MPMX26_02988 0.63 +0.1 3,106,856 - MPMX26_02988 0.63 +0.1 3,106,856 - MPMX26_02988 0.63 -0.8 3,106,856 - MPMX26_02988 0.63 +1.0 3,106,856 - MPMX26_02988 0.63 +1.5 3,106,856 - MPMX26_02988 0.63 -0.2 3,106,884 - MPMX26_02988 0.65 -0.4 3,106,887 - MPMX26_02988 0.66 +0.1 3,106,979 - MPMX26_02988 0.74 +0.4 3,106,998 - MPMX26_02988 0.75 +0.7 3,107,049 - MPMX26_02988 0.80 -1.2 3,107,197 + +1.8 3,107,205 - +0.5 3,107,205 - -0.2 3,107,205 - +0.4 3,107,205 - +0.4 3,107,229 + -0.3 3,107,431 - -0.0 3,107,466 - MPMX26_02989 0.12 -0.7 3,107,466 - MPMX26_02989 0.12 -0.3 3,107,466 - MPMX26_02989 0.12 -0.6 3,107,466 - MPMX26_02989 0.12 +0.6 3,107,493 - MPMX26_02989 0.18 +0.1 3,107,562 - MPMX26_02989 0.35 -0.0 3,107,590 - MPMX26_02989 0.42 -0.5 3,107,590 - MPMX26_02989 0.42 -0.2 3,107,590 - MPMX26_02989 0.42 -0.0 3,107,590 - MPMX26_02989 0.42 +0.5 3,107,665 - MPMX26_02989 0.61 -0.3 3,107,680 - MPMX26_02989 0.64 +0.3 3,107,818 - -1.0 3,107,850 + +0.1 3,107,907 + +0.7 3,107,953 + +0.1 3,107,958 + MPMX26_02990 0.10 +2.0 3,108,038 + MPMX26_02990 0.23 -1.0 3,108,101 + MPMX26_02990 0.33 -1.0 3,108,106 + MPMX26_02990 0.34 +0.4 3,108,172 + MPMX26_02990 0.45 -0.2 3,108,186 + MPMX26_02990 0.47 +0.5 3,108,186 + MPMX26_02990 0.47 -0.1 3,108,192 + MPMX26_02990 0.48 +1.4 3,108,192 + MPMX26_02990 0.48 -0.7 3,108,194 + MPMX26_02990 0.48 +0.6 3,108,200 - MPMX26_02990 0.49 -0.0 3,108,274 + MPMX26_02990 0.61 -0.1 3,108,274 + MPMX26_02990 0.61 +1.2
Or see this region's nucleotide sequence