Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02988

Experiment: L-Proline (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02987 and MPMX26_02988 are separated by 143 nucleotidesMPMX26_02988 and MPMX26_02989 are separated by 130 nucleotidesMPMX26_02989 and MPMX26_02990 are separated by 72 nucleotides MPMX26_02987: MPMX26_02987 - Replication-associated recombination protein A, at 3,104,701 to 3,105,972 _02987 MPMX26_02988: MPMX26_02988 - Aldose sugar dehydrogenase YliI, at 3,106,116 to 3,107,288 _02988 MPMX26_02989: MPMX26_02989 - HTH-type transcriptional regulator CueR, at 3,107,419 to 3,107,823 _02989 MPMX26_02990: MPMX26_02990 - hypothetical protein, at 3,107,896 to 3,108,513 _02990 Position (kb) 3106 3107 3108Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 3105.128 kb on - strand, within MPMX26_02987at 3105.136 kb on - strand, within MPMX26_02987at 3105.181 kb on - strand, within MPMX26_02987at 3105.181 kb on - strand, within MPMX26_02987at 3105.181 kb on - strand, within MPMX26_02987at 3105.181 kb on - strand, within MPMX26_02987at 3105.189 kb on - strand, within MPMX26_02987at 3105.204 kb on - strand, within MPMX26_02987at 3105.204 kb on - strand, within MPMX26_02987at 3105.300 kb on - strand, within MPMX26_02987at 3105.308 kb on - strand, within MPMX26_02987at 3105.313 kb on - strand, within MPMX26_02987at 3105.420 kb on - strand, within MPMX26_02987at 3105.501 kb on - strand, within MPMX26_02987at 3105.535 kb on - strand, within MPMX26_02987at 3105.535 kb on - strand, within MPMX26_02987at 3105.565 kb on - strand, within MPMX26_02987at 3105.565 kb on - strand, within MPMX26_02987at 3105.694 kb on - strand, within MPMX26_02987at 3105.745 kb on - strand, within MPMX26_02987at 3105.748 kb on - strand, within MPMX26_02987at 3105.768 kb on - strand, within MPMX26_02987at 3105.814 kb on - strand, within MPMX26_02987at 3105.819 kb on - strand, within MPMX26_02987at 3105.830 kb on - strand, within MPMX26_02987at 3105.837 kb on - strand, within MPMX26_02987at 3105.861 kb on - strandat 3105.861 kb on - strandat 3105.861 kb on - strandat 3105.866 kb on - strandat 3105.876 kb on - strandat 3105.895 kb on - strandat 3105.932 kb on - strandat 3105.932 kb on - strandat 3105.937 kb on - strandat 3105.949 kb on - strandat 3105.955 kb on - strandat 3105.982 kb on + strandat 3106.058 kb on - strandat 3106.058 kb on - strandat 3106.171 kb on - strandat 3106.190 kb on - strandat 3106.190 kb on - strandat 3106.190 kb on - strandat 3106.190 kb on - strandat 3106.269 kb on + strand, within MPMX26_02988at 3106.372 kb on + strand, within MPMX26_02988at 3106.511 kb on - strand, within MPMX26_02988at 3106.617 kb on - strand, within MPMX26_02988at 3106.619 kb on - strand, within MPMX26_02988at 3106.622 kb on - strand, within MPMX26_02988at 3106.670 kb on - strand, within MPMX26_02988at 3106.721 kb on + strand, within MPMX26_02988at 3106.729 kb on - strand, within MPMX26_02988at 3106.729 kb on - strand, within MPMX26_02988at 3106.740 kb on - strand, within MPMX26_02988at 3106.787 kb on - strand, within MPMX26_02988at 3106.838 kb on + strand, within MPMX26_02988at 3106.848 kb on + strand, within MPMX26_02988at 3106.851 kb on - strand, within MPMX26_02988at 3106.851 kb on - strand, within MPMX26_02988at 3106.856 kb on - strand, within MPMX26_02988at 3106.856 kb on - strand, within MPMX26_02988at 3106.856 kb on - strand, within MPMX26_02988at 3106.856 kb on - strand, within MPMX26_02988at 3106.856 kb on - strand, within MPMX26_02988at 3106.856 kb on - strand, within MPMX26_02988at 3106.856 kb on - strand, within MPMX26_02988at 3106.856 kb on - strand, within MPMX26_02988at 3106.856 kb on - strand, within MPMX26_02988at 3106.856 kb on - strand, within MPMX26_02988at 3106.856 kb on - strand, within MPMX26_02988at 3106.856 kb on - strand, within MPMX26_02988at 3106.884 kb on - strand, within MPMX26_02988at 3106.887 kb on - strand, within MPMX26_02988at 3106.979 kb on - strand, within MPMX26_02988at 3106.998 kb on - strand, within MPMX26_02988at 3107.049 kb on - strand, within MPMX26_02988at 3107.197 kb on + strandat 3107.205 kb on - strandat 3107.205 kb on - strandat 3107.205 kb on - strandat 3107.205 kb on - strandat 3107.229 kb on + strandat 3107.431 kb on - strandat 3107.466 kb on - strand, within MPMX26_02989at 3107.466 kb on - strand, within MPMX26_02989at 3107.466 kb on - strand, within MPMX26_02989at 3107.466 kb on - strand, within MPMX26_02989at 3107.493 kb on - strand, within MPMX26_02989at 3107.562 kb on - strand, within MPMX26_02989at 3107.590 kb on - strand, within MPMX26_02989at 3107.590 kb on - strand, within MPMX26_02989at 3107.590 kb on - strand, within MPMX26_02989at 3107.590 kb on - strand, within MPMX26_02989at 3107.665 kb on - strand, within MPMX26_02989at 3107.680 kb on - strand, within MPMX26_02989at 3107.818 kb on - strandat 3107.850 kb on + strandat 3107.907 kb on + strandat 3107.953 kb on + strandat 3107.958 kb on + strand, within MPMX26_02990at 3108.038 kb on + strand, within MPMX26_02990at 3108.101 kb on + strand, within MPMX26_02990at 3108.106 kb on + strand, within MPMX26_02990at 3108.172 kb on + strand, within MPMX26_02990at 3108.186 kb on + strand, within MPMX26_02990at 3108.186 kb on + strand, within MPMX26_02990at 3108.192 kb on + strand, within MPMX26_02990at 3108.192 kb on + strand, within MPMX26_02990at 3108.194 kb on + strand, within MPMX26_02990at 3108.200 kb on - strand, within MPMX26_02990at 3108.274 kb on + strand, within MPMX26_02990at 3108.274 kb on + strand, within MPMX26_02990

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline (N)
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3,105,128 - MPMX26_02987 0.34 +0.4
3,105,136 - MPMX26_02987 0.34 -0.1
3,105,181 - MPMX26_02987 0.38 -0.5
3,105,181 - MPMX26_02987 0.38 +0.6
3,105,181 - MPMX26_02987 0.38 +0.5
3,105,181 - MPMX26_02987 0.38 -0.1
3,105,189 - MPMX26_02987 0.38 +0.1
3,105,204 - MPMX26_02987 0.40 -0.2
3,105,204 - MPMX26_02987 0.40 -0.4
3,105,300 - MPMX26_02987 0.47 +0.4
3,105,308 - MPMX26_02987 0.48 +0.5
3,105,313 - MPMX26_02987 0.48 +0.0
3,105,420 - MPMX26_02987 0.57 -0.3
3,105,501 - MPMX26_02987 0.63 -0.2
3,105,535 - MPMX26_02987 0.66 +0.5
3,105,535 - MPMX26_02987 0.66 -0.2
3,105,565 - MPMX26_02987 0.68 +0.2
3,105,565 - MPMX26_02987 0.68 +0.2
3,105,694 - MPMX26_02987 0.78 +0.0
3,105,745 - MPMX26_02987 0.82 +0.0
3,105,748 - MPMX26_02987 0.82 +0.1
3,105,768 - MPMX26_02987 0.84 +0.4
3,105,814 - MPMX26_02987 0.88 +0.5
3,105,819 - MPMX26_02987 0.88 +0.1
3,105,830 - MPMX26_02987 0.89 +1.0
3,105,837 - MPMX26_02987 0.89 +0.1
3,105,861 - +0.2
3,105,861 - -0.2
3,105,861 - +0.2
3,105,866 - +1.2
3,105,876 - -0.1
3,105,895 - -3.6
3,105,932 - -0.2
3,105,932 - -0.2
3,105,937 - -0.3
3,105,949 - -0.1
3,105,955 - +0.1
3,105,982 + -0.7
3,106,058 - -2.4
3,106,058 - +0.1
3,106,171 - +0.5
3,106,190 - -0.0
3,106,190 - -0.6
3,106,190 - -0.3
3,106,190 - -1.5
3,106,269 + MPMX26_02988 0.13 -1.3
3,106,372 + MPMX26_02988 0.22 +0.5
3,106,511 - MPMX26_02988 0.34 +0.0
3,106,617 - MPMX26_02988 0.43 +1.6
3,106,619 - MPMX26_02988 0.43 +0.5
3,106,622 - MPMX26_02988 0.43 +0.4
3,106,670 - MPMX26_02988 0.47 -1.7
3,106,721 + MPMX26_02988 0.52 -1.1
3,106,729 - MPMX26_02988 0.52 +0.3
3,106,729 - MPMX26_02988 0.52 +0.3
3,106,740 - MPMX26_02988 0.53 -1.0
3,106,787 - MPMX26_02988 0.57 -0.5
3,106,838 + MPMX26_02988 0.62 -0.2
3,106,848 + MPMX26_02988 0.62 +0.4
3,106,851 - MPMX26_02988 0.63 +0.8
3,106,851 - MPMX26_02988 0.63 -0.4
3,106,856 - MPMX26_02988 0.63 +1.4
3,106,856 - MPMX26_02988 0.63 +0.0
3,106,856 - MPMX26_02988 0.63 +2.1
3,106,856 - MPMX26_02988 0.63 -0.5
3,106,856 - MPMX26_02988 0.63 -0.3
3,106,856 - MPMX26_02988 0.63 -0.3
3,106,856 - MPMX26_02988 0.63 +0.1
3,106,856 - MPMX26_02988 0.63 +0.1
3,106,856 - MPMX26_02988 0.63 -0.8
3,106,856 - MPMX26_02988 0.63 +1.0
3,106,856 - MPMX26_02988 0.63 +1.5
3,106,856 - MPMX26_02988 0.63 -0.2
3,106,884 - MPMX26_02988 0.65 -0.4
3,106,887 - MPMX26_02988 0.66 +0.1
3,106,979 - MPMX26_02988 0.74 +0.4
3,106,998 - MPMX26_02988 0.75 +0.7
3,107,049 - MPMX26_02988 0.80 -1.2
3,107,197 + +1.8
3,107,205 - +0.5
3,107,205 - -0.2
3,107,205 - +0.4
3,107,205 - +0.4
3,107,229 + -0.3
3,107,431 - -0.0
3,107,466 - MPMX26_02989 0.12 -0.7
3,107,466 - MPMX26_02989 0.12 -0.3
3,107,466 - MPMX26_02989 0.12 -0.6
3,107,466 - MPMX26_02989 0.12 +0.6
3,107,493 - MPMX26_02989 0.18 +0.1
3,107,562 - MPMX26_02989 0.35 -0.0
3,107,590 - MPMX26_02989 0.42 -0.5
3,107,590 - MPMX26_02989 0.42 -0.2
3,107,590 - MPMX26_02989 0.42 -0.0
3,107,590 - MPMX26_02989 0.42 +0.5
3,107,665 - MPMX26_02989 0.61 -0.3
3,107,680 - MPMX26_02989 0.64 +0.3
3,107,818 - -1.0
3,107,850 + +0.1
3,107,907 + +0.7
3,107,953 + +0.1
3,107,958 + MPMX26_02990 0.10 +2.0
3,108,038 + MPMX26_02990 0.23 -1.0
3,108,101 + MPMX26_02990 0.33 -1.0
3,108,106 + MPMX26_02990 0.34 +0.4
3,108,172 + MPMX26_02990 0.45 -0.2
3,108,186 + MPMX26_02990 0.47 +0.5
3,108,186 + MPMX26_02990 0.47 -0.1
3,108,192 + MPMX26_02990 0.48 +1.4
3,108,192 + MPMX26_02990 0.48 -0.7
3,108,194 + MPMX26_02990 0.48 +0.6
3,108,200 - MPMX26_02990 0.49 -0.0
3,108,274 + MPMX26_02990 0.61 -0.1
3,108,274 + MPMX26_02990 0.61 +1.2

Or see this region's nucleotide sequence