Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02621

Experiment: L-Proline (N)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_02619 and MPMX26_02620 are separated by 99 nucleotidesMPMX26_02620 and MPMX26_02621 are separated by 44 nucleotidesMPMX26_02621 and MPMX26_02622 are separated by 9 nucleotidesMPMX26_02622 and MPMX26_02623 are separated by 196 nucleotides MPMX26_02619: MPMX26_02619 - Vitamin B12 transporter BtuB, at 2,713,520 to 2,715,337 _02619 MPMX26_02620: MPMX26_02620 - Cobalamin adenosyltransferase, at 2,715,437 to 2,716,015 _02620 MPMX26_02621: MPMX26_02621 - Glycerophosphodiester phosphodiesterase, cytoplasmic, at 2,716,060 to 2,716,773 _02621 MPMX26_02622: MPMX26_02622 - hypothetical protein, at 2,716,783 to 2,717,316 _02622 MPMX26_02623: MPMX26_02623 - hypothetical protein, at 2,717,513 to 2,718,676 _02623 Position (kb) 2716 2717Strain fitness (log2 ratio) -2 -1 0 1 2at 2715.077 kb on + strand, within MPMX26_02619at 2715.077 kb on + strand, within MPMX26_02619at 2715.077 kb on + strand, within MPMX26_02619at 2715.091 kb on + strand, within MPMX26_02619at 2715.091 kb on + strand, within MPMX26_02619at 2715.091 kb on + strand, within MPMX26_02619at 2715.092 kb on + strand, within MPMX26_02619at 2715.092 kb on + strand, within MPMX26_02619at 2715.128 kb on + strand, within MPMX26_02619at 2715.177 kb on + strandat 2715.266 kb on + strandat 2715.266 kb on + strandat 2715.266 kb on + strandat 2715.266 kb on + strandat 2715.266 kb on + strandat 2715.266 kb on + strandat 2715.266 kb on + strandat 2715.266 kb on + strandat 2715.266 kb on + strandat 2715.266 kb on + strandat 2715.268 kb on + strandat 2715.268 kb on + strandat 2715.318 kb on + strandat 2715.318 kb on + strandat 2715.318 kb on + strandat 2715.387 kb on + strandat 2715.486 kb on + strandat 2715.529 kb on + strand, within MPMX26_02620at 2715.529 kb on + strand, within MPMX26_02620at 2715.538 kb on + strand, within MPMX26_02620at 2715.539 kb on + strand, within MPMX26_02620at 2715.568 kb on + strand, within MPMX26_02620at 2715.569 kb on + strand, within MPMX26_02620at 2715.601 kb on + strand, within MPMX26_02620at 2715.647 kb on + strand, within MPMX26_02620at 2715.703 kb on + strand, within MPMX26_02620at 2715.703 kb on + strand, within MPMX26_02620at 2715.703 kb on + strand, within MPMX26_02620at 2715.703 kb on + strand, within MPMX26_02620at 2715.748 kb on + strand, within MPMX26_02620at 2715.752 kb on + strand, within MPMX26_02620at 2715.758 kb on + strand, within MPMX26_02620at 2715.798 kb on + strand, within MPMX26_02620at 2715.818 kb on + strand, within MPMX26_02620at 2715.818 kb on + strand, within MPMX26_02620at 2715.866 kb on + strand, within MPMX26_02620at 2715.866 kb on + strand, within MPMX26_02620at 2715.866 kb on + strand, within MPMX26_02620at 2715.873 kb on + strand, within MPMX26_02620at 2715.873 kb on + strand, within MPMX26_02620at 2715.873 kb on + strand, within MPMX26_02620at 2715.908 kb on + strand, within MPMX26_02620at 2715.908 kb on + strand, within MPMX26_02620at 2715.960 kb on + strandat 2715.961 kb on + strandat 2715.961 kb on + strandat 2715.967 kb on + strandat 2715.973 kb on + strandat 2716.079 kb on + strandat 2716.136 kb on + strand, within MPMX26_02621at 2716.143 kb on + strand, within MPMX26_02621at 2716.153 kb on + strand, within MPMX26_02621at 2716.163 kb on + strand, within MPMX26_02621at 2716.165 kb on + strand, within MPMX26_02621at 2716.173 kb on + strand, within MPMX26_02621at 2716.187 kb on + strand, within MPMX26_02621at 2716.228 kb on + strand, within MPMX26_02621at 2716.245 kb on + strand, within MPMX26_02621at 2716.274 kb on + strand, within MPMX26_02621at 2716.379 kb on + strand, within MPMX26_02621at 2716.389 kb on + strand, within MPMX26_02621at 2716.422 kb on + strand, within MPMX26_02621at 2716.427 kb on + strand, within MPMX26_02621at 2716.432 kb on + strand, within MPMX26_02621at 2716.438 kb on + strand, within MPMX26_02621at 2716.440 kb on + strand, within MPMX26_02621at 2716.440 kb on + strand, within MPMX26_02621at 2716.440 kb on + strand, within MPMX26_02621at 2716.440 kb on + strand, within MPMX26_02621at 2716.448 kb on + strand, within MPMX26_02621at 2716.465 kb on + strand, within MPMX26_02621at 2716.465 kb on + strand, within MPMX26_02621at 2716.470 kb on + strand, within MPMX26_02621at 2716.489 kb on + strand, within MPMX26_02621at 2716.489 kb on + strand, within MPMX26_02621at 2716.489 kb on + strand, within MPMX26_02621at 2716.539 kb on + strand, within MPMX26_02621at 2716.552 kb on + strand, within MPMX26_02621at 2716.557 kb on + strand, within MPMX26_02621at 2716.582 kb on + strand, within MPMX26_02621at 2716.582 kb on + strand, within MPMX26_02621at 2716.627 kb on + strand, within MPMX26_02621at 2716.648 kb on + strand, within MPMX26_02621at 2716.671 kb on + strand, within MPMX26_02621at 2716.688 kb on + strand, within MPMX26_02621at 2716.688 kb on + strand, within MPMX26_02621at 2716.698 kb on + strand, within MPMX26_02621at 2716.705 kb on + strandat 2716.705 kb on + strandat 2716.710 kb on + strandat 2716.721 kb on + strandat 2716.723 kb on + strandat 2716.723 kb on + strandat 2716.746 kb on + strandat 2716.746 kb on + strandat 2716.746 kb on + strandat 2716.761 kb on - strandat 2716.804 kb on - strandat 2716.815 kb on - strandat 2716.825 kb on - strandat 2716.890 kb on - strand, within MPMX26_02622at 2716.907 kb on - strand, within MPMX26_02622at 2716.909 kb on - strand, within MPMX26_02622at 2716.913 kb on - strand, within MPMX26_02622at 2716.962 kb on - strand, within MPMX26_02622at 2716.972 kb on - strand, within MPMX26_02622at 2716.972 kb on - strand, within MPMX26_02622at 2716.972 kb on - strand, within MPMX26_02622at 2716.989 kb on - strand, within MPMX26_02622at 2716.999 kb on - strand, within MPMX26_02622at 2716.999 kb on - strand, within MPMX26_02622at 2716.999 kb on - strand, within MPMX26_02622at 2716.999 kb on - strand, within MPMX26_02622at 2716.999 kb on - strand, within MPMX26_02622at 2716.999 kb on - strand, within MPMX26_02622at 2716.999 kb on - strand, within MPMX26_02622at 2716.999 kb on - strand, within MPMX26_02622at 2716.999 kb on - strand, within MPMX26_02622at 2716.999 kb on - strand, within MPMX26_02622at 2716.999 kb on - strand, within MPMX26_02622at 2716.999 kb on - strand, within MPMX26_02622at 2716.999 kb on - strand, within MPMX26_02622at 2717.001 kb on - strand, within MPMX26_02622at 2717.001 kb on - strand, within MPMX26_02622at 2717.001 kb on - strand, within MPMX26_02622at 2717.028 kb on - strand, within MPMX26_02622at 2717.131 kb on - strand, within MPMX26_02622at 2717.131 kb on - strand, within MPMX26_02622at 2717.365 kb on + strandat 2717.404 kb on + strandat 2717.417 kb on - strandat 2717.490 kb on + strandat 2717.490 kb on + strandat 2717.491 kb on + strandat 2717.491 kb on + strandat 2717.515 kb on + strandat 2717.515 kb on + strandat 2717.515 kb on + strandat 2717.525 kb on + strandat 2717.525 kb on + strandat 2717.559 kb on + strandat 2717.559 kb on + strandat 2717.559 kb on + strandat 2717.559 kb on + strandat 2717.559 kb on + strandat 2717.559 kb on + strandat 2717.559 kb on + strandat 2717.559 kb on + strandat 2717.559 kb on + strandat 2717.559 kb on + strandat 2717.559 kb on + strandat 2717.559 kb on + strandat 2717.559 kb on + strandat 2717.559 kb on + strandat 2717.637 kb on + strand, within MPMX26_02623at 2717.639 kb on + strand, within MPMX26_02623at 2717.676 kb on + strand, within MPMX26_02623at 2717.731 kb on + strand, within MPMX26_02623

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline (N)
remove
2,715,077 + MPMX26_02619 0.86 +0.6
2,715,077 + MPMX26_02619 0.86 -0.1
2,715,077 + MPMX26_02619 0.86 +0.4
2,715,091 + MPMX26_02619 0.86 -0.9
2,715,091 + MPMX26_02619 0.86 +0.6
2,715,091 + MPMX26_02619 0.86 +0.4
2,715,092 + MPMX26_02619 0.86 +1.7
2,715,092 + MPMX26_02619 0.86 +0.3
2,715,128 + MPMX26_02619 0.88 -0.1
2,715,177 + +0.6
2,715,266 + +0.3
2,715,266 + +1.4
2,715,266 + +0.9
2,715,266 + +0.1
2,715,266 + +0.4
2,715,266 + +0.7
2,715,266 + -0.1
2,715,266 + +0.3
2,715,266 + +0.3
2,715,266 + +0.6
2,715,268 + +0.7
2,715,268 + +0.7
2,715,318 + -0.1
2,715,318 + +0.4
2,715,318 + -0.2
2,715,387 + -0.1
2,715,486 + -0.3
2,715,529 + MPMX26_02620 0.16 +0.2
2,715,529 + MPMX26_02620 0.16 -0.1
2,715,538 + MPMX26_02620 0.17 +0.1
2,715,539 + MPMX26_02620 0.18 +0.3
2,715,568 + MPMX26_02620 0.23 -0.6
2,715,569 + MPMX26_02620 0.23 -0.1
2,715,601 + MPMX26_02620 0.28 +0.0
2,715,647 + MPMX26_02620 0.36 +0.1
2,715,703 + MPMX26_02620 0.46 -0.2
2,715,703 + MPMX26_02620 0.46 -0.1
2,715,703 + MPMX26_02620 0.46 +0.6
2,715,703 + MPMX26_02620 0.46 -0.7
2,715,748 + MPMX26_02620 0.54 -1.7
2,715,752 + MPMX26_02620 0.54 +0.3
2,715,758 + MPMX26_02620 0.55 +0.2
2,715,798 + MPMX26_02620 0.62 +0.5
2,715,818 + MPMX26_02620 0.66 +0.9
2,715,818 + MPMX26_02620 0.66 -0.0
2,715,866 + MPMX26_02620 0.74 +0.8
2,715,866 + MPMX26_02620 0.74 +0.3
2,715,866 + MPMX26_02620 0.74 +0.1
2,715,873 + MPMX26_02620 0.75 +0.3
2,715,873 + MPMX26_02620 0.75 -0.4
2,715,873 + MPMX26_02620 0.75 +0.1
2,715,908 + MPMX26_02620 0.81 +0.4
2,715,908 + MPMX26_02620 0.81 +0.2
2,715,960 + +0.9
2,715,961 + +0.4
2,715,961 + -0.5
2,715,967 + -0.1
2,715,973 + +0.2
2,716,079 + +0.1
2,716,136 + MPMX26_02621 0.11 -0.4
2,716,143 + MPMX26_02621 0.12 -0.3
2,716,153 + MPMX26_02621 0.13 -0.5
2,716,163 + MPMX26_02621 0.14 -0.2
2,716,165 + MPMX26_02621 0.15 -0.1
2,716,173 + MPMX26_02621 0.16 -0.2
2,716,187 + MPMX26_02621 0.18 -0.4
2,716,228 + MPMX26_02621 0.24 -0.0
2,716,245 + MPMX26_02621 0.26 -0.6
2,716,274 + MPMX26_02621 0.30 +1.1
2,716,379 + MPMX26_02621 0.45 -1.5
2,716,389 + MPMX26_02621 0.46 +0.1
2,716,422 + MPMX26_02621 0.51 +1.9
2,716,427 + MPMX26_02621 0.51 -0.8
2,716,432 + MPMX26_02621 0.52 -0.6
2,716,438 + MPMX26_02621 0.53 -0.3
2,716,440 + MPMX26_02621 0.53 -0.6
2,716,440 + MPMX26_02621 0.53 -1.5
2,716,440 + MPMX26_02621 0.53 -0.6
2,716,440 + MPMX26_02621 0.53 -0.3
2,716,448 + MPMX26_02621 0.54 -0.1
2,716,465 + MPMX26_02621 0.57 -0.7
2,716,465 + MPMX26_02621 0.57 +0.1
2,716,470 + MPMX26_02621 0.57 -0.3
2,716,489 + MPMX26_02621 0.60 -0.0
2,716,489 + MPMX26_02621 0.60 -1.2
2,716,489 + MPMX26_02621 0.60 -0.7
2,716,539 + MPMX26_02621 0.67 -0.2
2,716,552 + MPMX26_02621 0.69 +0.0
2,716,557 + MPMX26_02621 0.70 -0.4
2,716,582 + MPMX26_02621 0.73 -0.7
2,716,582 + MPMX26_02621 0.73 -0.4
2,716,627 + MPMX26_02621 0.79 -0.2
2,716,648 + MPMX26_02621 0.82 -1.1
2,716,671 + MPMX26_02621 0.86 +0.3
2,716,688 + MPMX26_02621 0.88 -0.6
2,716,688 + MPMX26_02621 0.88 -0.2
2,716,698 + MPMX26_02621 0.89 -0.7
2,716,705 + +0.2
2,716,705 + -0.2
2,716,710 + -0.7
2,716,721 + +0.6
2,716,723 + +0.1
2,716,723 + -0.1
2,716,746 + -0.0
2,716,746 + +0.4
2,716,746 + -0.1
2,716,761 - +1.1
2,716,804 - -0.4
2,716,815 - +0.1
2,716,825 - -0.0
2,716,890 - MPMX26_02622 0.20 -0.1
2,716,907 - MPMX26_02622 0.23 +1.2
2,716,909 - MPMX26_02622 0.24 +0.1
2,716,913 - MPMX26_02622 0.24 +1.2
2,716,962 - MPMX26_02622 0.34 -0.0
2,716,972 - MPMX26_02622 0.35 +0.5
2,716,972 - MPMX26_02622 0.35 -0.8
2,716,972 - MPMX26_02622 0.35 +0.5
2,716,989 - MPMX26_02622 0.39 -0.9
2,716,999 - MPMX26_02622 0.40 +0.2
2,716,999 - MPMX26_02622 0.40 -0.4
2,716,999 - MPMX26_02622 0.40 -0.2
2,716,999 - MPMX26_02622 0.40 -0.0
2,716,999 - MPMX26_02622 0.40 -0.2
2,716,999 - MPMX26_02622 0.40 +0.4
2,716,999 - MPMX26_02622 0.40 -0.0
2,716,999 - MPMX26_02622 0.40 +0.6
2,716,999 - MPMX26_02622 0.40 -0.3
2,716,999 - MPMX26_02622 0.40 -0.0
2,716,999 - MPMX26_02622 0.40 +0.6
2,716,999 - MPMX26_02622 0.40 +0.7
2,716,999 - MPMX26_02622 0.40 -0.3
2,717,001 - MPMX26_02622 0.41 -0.2
2,717,001 - MPMX26_02622 0.41 +0.6
2,717,001 - MPMX26_02622 0.41 -0.2
2,717,028 - MPMX26_02622 0.46 -0.3
2,717,131 - MPMX26_02622 0.65 -0.1
2,717,131 - MPMX26_02622 0.65 +0.2
2,717,365 + -1.1
2,717,404 + -0.7
2,717,417 - -0.5
2,717,490 + -0.6
2,717,490 + -0.3
2,717,491 + -0.5
2,717,491 + -0.9
2,717,515 + -1.0
2,717,515 + -1.2
2,717,515 + -0.2
2,717,525 + -0.8
2,717,525 + -1.0
2,717,559 + -0.6
2,717,559 + -1.6
2,717,559 + -1.3
2,717,559 + -0.6
2,717,559 + -0.8
2,717,559 + -1.4
2,717,559 + -1.3
2,717,559 + -0.7
2,717,559 + -1.0
2,717,559 + -0.9
2,717,559 + -0.4
2,717,559 + -0.9
2,717,559 + -1.9
2,717,559 + -1.3
2,717,637 + MPMX26_02623 0.11 -1.4
2,717,639 + MPMX26_02623 0.11 -1.0
2,717,676 + MPMX26_02623 0.14 -1.2
2,717,731 + MPMX26_02623 0.19 -0.9

Or see this region's nucleotide sequence