Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02585

Experiment: L-Proline (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02584 and MPMX26_02585 are separated by 261 nucleotidesMPMX26_02585 and MPMX26_02586 are separated by 0 nucleotides MPMX26_02584: MPMX26_02584 - hypothetical protein, at 2,677,197 to 2,678,162 _02584 MPMX26_02585: MPMX26_02585 - Isochorismate synthase MenF, at 2,678,424 to 2,679,782 _02585 MPMX26_02586: MPMX26_02586 - Histidinol-phosphate aminotransferase, at 2,679,783 to 2,680,871 _02586 Position (kb) 2678 2679 2680Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 2677.458 kb on - strand, within MPMX26_02584at 2677.458 kb on - strand, within MPMX26_02584at 2677.586 kb on - strand, within MPMX26_02584at 2677.656 kb on - strand, within MPMX26_02584at 2677.966 kb on - strand, within MPMX26_02584at 2677.966 kb on - strand, within MPMX26_02584at 2678.414 kb on + strandat 2678.459 kb on + strandat 2678.459 kb on + strandat 2678.694 kb on + strand, within MPMX26_02585at 2678.694 kb on + strand, within MPMX26_02585at 2678.819 kb on + strand, within MPMX26_02585at 2678.840 kb on + strand, within MPMX26_02585at 2678.853 kb on + strand, within MPMX26_02585at 2678.853 kb on + strand, within MPMX26_02585at 2678.919 kb on + strand, within MPMX26_02585at 2678.936 kb on + strand, within MPMX26_02585at 2678.936 kb on + strand, within MPMX26_02585at 2678.937 kb on + strand, within MPMX26_02585at 2678.937 kb on + strand, within MPMX26_02585at 2678.937 kb on + strand, within MPMX26_02585at 2678.937 kb on + strand, within MPMX26_02585at 2678.937 kb on + strand, within MPMX26_02585at 2678.937 kb on + strand, within MPMX26_02585at 2678.937 kb on + strand, within MPMX26_02585at 2678.937 kb on + strand, within MPMX26_02585at 2678.937 kb on + strand, within MPMX26_02585at 2678.937 kb on + strand, within MPMX26_02585at 2678.937 kb on + strand, within MPMX26_02585at 2678.937 kb on + strand, within MPMX26_02585at 2679.047 kb on + strand, within MPMX26_02585at 2679.054 kb on + strand, within MPMX26_02585at 2679.072 kb on + strand, within MPMX26_02585at 2679.200 kb on + strand, within MPMX26_02585at 2679.233 kb on + strand, within MPMX26_02585at 2679.307 kb on + strand, within MPMX26_02585at 2679.338 kb on + strand, within MPMX26_02585at 2679.351 kb on + strand, within MPMX26_02585at 2679.351 kb on + strand, within MPMX26_02585at 2679.429 kb on + strand, within MPMX26_02585at 2679.555 kb on + strand, within MPMX26_02585at 2679.560 kb on + strand, within MPMX26_02585at 2679.618 kb on + strand, within MPMX26_02585at 2679.618 kb on + strand, within MPMX26_02585at 2679.623 kb on + strand, within MPMX26_02585at 2679.623 kb on + strand, within MPMX26_02585at 2679.623 kb on + strand, within MPMX26_02585at 2679.654 kb on + strandat 2679.738 kb on + strandat 2679.738 kb on + strandat 2679.743 kb on + strandat 2679.746 kb on - strandat 2679.746 kb on - strandat 2679.749 kb on + strandat 2679.757 kb on - strandat 2679.757 kb on - strandat 2679.757 kb on - strandat 2679.757 kb on - strandat 2679.761 kb on + strandat 2679.761 kb on + strandat 2679.762 kb on - strandat 2679.922 kb on - strand, within MPMX26_02586at 2680.030 kb on - strand, within MPMX26_02586at 2680.030 kb on - strand, within MPMX26_02586at 2680.030 kb on - strand, within MPMX26_02586at 2680.068 kb on - strand, within MPMX26_02586at 2680.142 kb on - strand, within MPMX26_02586at 2680.152 kb on - strand, within MPMX26_02586at 2680.152 kb on - strand, within MPMX26_02586at 2680.152 kb on - strand, within MPMX26_02586at 2680.170 kb on - strand, within MPMX26_02586at 2680.199 kb on - strand, within MPMX26_02586at 2680.199 kb on - strand, within MPMX26_02586at 2680.199 kb on - strand, within MPMX26_02586at 2680.199 kb on - strand, within MPMX26_02586at 2680.199 kb on - strand, within MPMX26_02586at 2680.299 kb on - strand, within MPMX26_02586at 2680.318 kb on - strand, within MPMX26_02586at 2680.332 kb on - strand, within MPMX26_02586at 2680.372 kb on - strand, within MPMX26_02586at 2680.405 kb on - strand, within MPMX26_02586at 2680.471 kb on - strand, within MPMX26_02586at 2680.510 kb on - strand, within MPMX26_02586at 2680.591 kb on - strand, within MPMX26_02586at 2680.622 kb on - strand, within MPMX26_02586at 2680.624 kb on - strand, within MPMX26_02586at 2680.624 kb on - strand, within MPMX26_02586at 2680.626 kb on - strand, within MPMX26_02586at 2680.626 kb on - strand, within MPMX26_02586at 2680.626 kb on - strand, within MPMX26_02586at 2680.626 kb on - strand, within MPMX26_02586at 2680.626 kb on - strand, within MPMX26_02586at 2680.695 kb on - strand, within MPMX26_02586at 2680.709 kb on - strand, within MPMX26_02586at 2680.709 kb on - strand, within MPMX26_02586at 2680.709 kb on - strand, within MPMX26_02586at 2680.723 kb on - strand, within MPMX26_02586at 2680.723 kb on - strand, within MPMX26_02586at 2680.736 kb on - strand, within MPMX26_02586at 2680.737 kb on - strand, within MPMX26_02586at 2680.743 kb on - strand, within MPMX26_02586

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline (N)
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2,677,458 - MPMX26_02584 0.27 -0.8
2,677,458 - MPMX26_02584 0.27 +0.9
2,677,586 - MPMX26_02584 0.40 -0.5
2,677,656 - MPMX26_02584 0.48 +0.4
2,677,966 - MPMX26_02584 0.80 +0.5
2,677,966 - MPMX26_02584 0.80 -0.0
2,678,414 + -1.4
2,678,459 + +0.0
2,678,459 + +0.1
2,678,694 + MPMX26_02585 0.20 -0.4
2,678,694 + MPMX26_02585 0.20 -0.3
2,678,819 + MPMX26_02585 0.29 -0.4
2,678,840 + MPMX26_02585 0.31 +0.3
2,678,853 + MPMX26_02585 0.32 -0.2
2,678,853 + MPMX26_02585 0.32 +0.2
2,678,919 + MPMX26_02585 0.36 +0.3
2,678,936 + MPMX26_02585 0.38 +0.2
2,678,936 + MPMX26_02585 0.38 +0.3
2,678,937 + MPMX26_02585 0.38 -0.7
2,678,937 + MPMX26_02585 0.38 +0.2
2,678,937 + MPMX26_02585 0.38 -0.3
2,678,937 + MPMX26_02585 0.38 -0.5
2,678,937 + MPMX26_02585 0.38 +0.2
2,678,937 + MPMX26_02585 0.38 -0.3
2,678,937 + MPMX26_02585 0.38 +0.2
2,678,937 + MPMX26_02585 0.38 -0.4
2,678,937 + MPMX26_02585 0.38 +0.2
2,678,937 + MPMX26_02585 0.38 +0.3
2,678,937 + MPMX26_02585 0.38 -0.4
2,678,937 + MPMX26_02585 0.38 -0.1
2,679,047 + MPMX26_02585 0.46 -0.1
2,679,054 + MPMX26_02585 0.46 -0.2
2,679,072 + MPMX26_02585 0.48 +0.1
2,679,200 + MPMX26_02585 0.57 -0.4
2,679,233 + MPMX26_02585 0.60 -0.6
2,679,307 + MPMX26_02585 0.65 +0.1
2,679,338 + MPMX26_02585 0.67 +0.1
2,679,351 + MPMX26_02585 0.68 -1.2
2,679,351 + MPMX26_02585 0.68 -0.2
2,679,429 + MPMX26_02585 0.74 +0.4
2,679,555 + MPMX26_02585 0.83 -0.2
2,679,560 + MPMX26_02585 0.84 -0.3
2,679,618 + MPMX26_02585 0.88 -0.3
2,679,618 + MPMX26_02585 0.88 +0.4
2,679,623 + MPMX26_02585 0.88 -0.6
2,679,623 + MPMX26_02585 0.88 +0.1
2,679,623 + MPMX26_02585 0.88 +0.5
2,679,654 + +0.0
2,679,738 + +0.3
2,679,738 + -0.6
2,679,743 + -0.6
2,679,746 - -0.4
2,679,746 - -0.5
2,679,749 + -0.2
2,679,757 - -0.1
2,679,757 - -0.5
2,679,757 - -0.9
2,679,757 - -1.0
2,679,761 + +0.1
2,679,761 + +1.2
2,679,762 - +0.7
2,679,922 - MPMX26_02586 0.13 -2.9
2,680,030 - MPMX26_02586 0.23 -2.6
2,680,030 - MPMX26_02586 0.23 -2.7
2,680,030 - MPMX26_02586 0.23 -4.7
2,680,068 - MPMX26_02586 0.26 -4.9
2,680,142 - MPMX26_02586 0.33 -3.1
2,680,152 - MPMX26_02586 0.34 -4.2
2,680,152 - MPMX26_02586 0.34 -4.6
2,680,152 - MPMX26_02586 0.34 -4.7
2,680,170 - MPMX26_02586 0.36 -4.0
2,680,199 - MPMX26_02586 0.38 -3.6
2,680,199 - MPMX26_02586 0.38 -5.0
2,680,199 - MPMX26_02586 0.38 -3.8
2,680,199 - MPMX26_02586 0.38 -3.9
2,680,199 - MPMX26_02586 0.38 -3.4
2,680,299 - MPMX26_02586 0.47 -3.9
2,680,318 - MPMX26_02586 0.49 -3.1
2,680,332 - MPMX26_02586 0.50 -2.8
2,680,372 - MPMX26_02586 0.54 -3.9
2,680,405 - MPMX26_02586 0.57 -1.6
2,680,471 - MPMX26_02586 0.63 -2.5
2,680,510 - MPMX26_02586 0.67 -1.9
2,680,591 - MPMX26_02586 0.74 -2.5
2,680,622 - MPMX26_02586 0.77 -1.9
2,680,624 - MPMX26_02586 0.77 -3.1
2,680,624 - MPMX26_02586 0.77 -3.3
2,680,626 - MPMX26_02586 0.77 -5.3
2,680,626 - MPMX26_02586 0.77 -3.4
2,680,626 - MPMX26_02586 0.77 -3.6
2,680,626 - MPMX26_02586 0.77 -3.9
2,680,626 - MPMX26_02586 0.77 -3.3
2,680,695 - MPMX26_02586 0.84 -4.7
2,680,709 - MPMX26_02586 0.85 -2.7
2,680,709 - MPMX26_02586 0.85 -4.4
2,680,709 - MPMX26_02586 0.85 -3.5
2,680,723 - MPMX26_02586 0.86 -1.8
2,680,723 - MPMX26_02586 0.86 -2.7
2,680,736 - MPMX26_02586 0.88 -3.1
2,680,737 - MPMX26_02586 0.88 -4.1
2,680,743 - MPMX26_02586 0.88 -2.6

Or see this region's nucleotide sequence