Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02371

Experiment: L-Proline (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02369 and MPMX26_02370 are separated by 25 nucleotidesMPMX26_02370 and MPMX26_02371 are separated by 235 nucleotidesMPMX26_02371 and MPMX26_02372 are separated by 20 nucleotidesMPMX26_02372 and MPMX26_02373 are separated by 208 nucleotides MPMX26_02369: MPMX26_02369 - NAD/NADP-dependent betaine aldehyde dehydrogenase, at 2,451,757 to 2,453,232 _02369 MPMX26_02370: MPMX26_02370 - HTH-type transcriptional regulator BetI, at 2,453,258 to 2,453,839 _02370 MPMX26_02371: MPMX26_02371 - Osmo-dependent choline transporter BetT2, at 2,454,075 to 2,456,114 _02371 MPMX26_02372: MPMX26_02372 - hypothetical protein, at 2,456,135 to 2,456,752 _02372 MPMX26_02373: MPMX26_02373 - Quercetin 2,3-dioxygenase, at 2,456,961 to 2,457,647 _02373 Position (kb) 2454 2455 2456 2457Strain fitness (log2 ratio) -2 -1 0 1 2at 2453.111 kb on - strandat 2453.121 kb on - strandat 2453.121 kb on - strandat 2453.121 kb on - strandat 2453.121 kb on - strandat 2453.121 kb on - strandat 2453.121 kb on - strandat 2453.121 kb on - strandat 2453.121 kb on - strandat 2453.121 kb on - strandat 2453.121 kb on - strandat 2453.133 kb on - strandat 2453.138 kb on - strandat 2453.156 kb on - strandat 2453.156 kb on - strandat 2453.156 kb on - strandat 2453.156 kb on - strandat 2453.180 kb on - strandat 2453.180 kb on - strandat 2453.208 kb on - strandat 2453.210 kb on - strandat 2453.210 kb on - strandat 2453.302 kb on - strandat 2453.316 kb on - strandat 2453.331 kb on - strand, within MPMX26_02370at 2453.331 kb on - strand, within MPMX26_02370at 2453.333 kb on - strand, within MPMX26_02370at 2453.333 kb on - strand, within MPMX26_02370at 2453.363 kb on - strand, within MPMX26_02370at 2453.368 kb on - strand, within MPMX26_02370at 2453.396 kb on - strand, within MPMX26_02370at 2453.447 kb on - strand, within MPMX26_02370at 2453.448 kb on - strand, within MPMX26_02370at 2453.472 kb on - strand, within MPMX26_02370at 2453.472 kb on - strand, within MPMX26_02370at 2453.496 kb on - strand, within MPMX26_02370at 2453.582 kb on - strand, within MPMX26_02370at 2453.616 kb on - strand, within MPMX26_02370at 2453.639 kb on - strand, within MPMX26_02370at 2453.753 kb on - strand, within MPMX26_02370at 2453.753 kb on - strand, within MPMX26_02370at 2453.753 kb on - strand, within MPMX26_02370at 2453.760 kb on - strand, within MPMX26_02370at 2453.769 kb on - strand, within MPMX26_02370at 2453.769 kb on - strand, within MPMX26_02370at 2453.770 kb on - strand, within MPMX26_02370at 2453.778 kb on - strand, within MPMX26_02370at 2453.803 kb on - strandat 2453.830 kb on - strandat 2453.849 kb on - strandat 2453.870 kb on - strandat 2453.875 kb on - strandat 2453.875 kb on - strandat 2453.875 kb on - strandat 2454.491 kb on + strand, within MPMX26_02371at 2454.491 kb on + strand, within MPMX26_02371at 2454.491 kb on + strand, within MPMX26_02371at 2454.537 kb on + strand, within MPMX26_02371at 2454.644 kb on + strand, within MPMX26_02371at 2455.025 kb on + strand, within MPMX26_02371at 2455.526 kb on + strand, within MPMX26_02371at 2455.937 kb on + strandat 2455.988 kb on + strandat 2456.134 kb on + strandat 2456.134 kb on + strandat 2456.167 kb on + strandat 2456.167 kb on + strandat 2456.167 kb on + strandat 2456.167 kb on + strandat 2456.167 kb on + strandat 2456.179 kb on + strandat 2456.179 kb on + strandat 2456.179 kb on + strandat 2456.179 kb on + strandat 2456.242 kb on + strand, within MPMX26_02372at 2456.242 kb on + strand, within MPMX26_02372at 2456.242 kb on + strand, within MPMX26_02372at 2456.257 kb on + strand, within MPMX26_02372at 2456.257 kb on + strand, within MPMX26_02372at 2456.257 kb on + strand, within MPMX26_02372at 2456.272 kb on + strand, within MPMX26_02372at 2456.305 kb on + strand, within MPMX26_02372at 2456.329 kb on + strand, within MPMX26_02372at 2456.369 kb on + strand, within MPMX26_02372at 2456.468 kb on + strand, within MPMX26_02372at 2456.497 kb on + strand, within MPMX26_02372at 2456.502 kb on + strand, within MPMX26_02372at 2456.502 kb on + strand, within MPMX26_02372at 2456.502 kb on + strand, within MPMX26_02372at 2456.510 kb on + strand, within MPMX26_02372at 2456.530 kb on + strand, within MPMX26_02372at 2456.534 kb on + strand, within MPMX26_02372at 2456.534 kb on + strand, within MPMX26_02372at 2456.536 kb on + strand, within MPMX26_02372at 2456.546 kb on + strand, within MPMX26_02372at 2456.567 kb on + strand, within MPMX26_02372at 2456.577 kb on + strand, within MPMX26_02372at 2456.585 kb on + strand, within MPMX26_02372at 2456.604 kb on + strand, within MPMX26_02372at 2456.645 kb on + strand, within MPMX26_02372at 2456.645 kb on + strand, within MPMX26_02372at 2456.645 kb on + strand, within MPMX26_02372at 2456.645 kb on + strand, within MPMX26_02372at 2456.645 kb on + strand, within MPMX26_02372at 2456.645 kb on + strand, within MPMX26_02372at 2456.645 kb on + strand, within MPMX26_02372at 2456.645 kb on + strand, within MPMX26_02372at 2456.645 kb on + strand, within MPMX26_02372at 2456.645 kb on + strand, within MPMX26_02372at 2456.645 kb on + strand, within MPMX26_02372at 2456.645 kb on + strand, within MPMX26_02372at 2456.645 kb on + strand, within MPMX26_02372at 2456.645 kb on + strand, within MPMX26_02372at 2456.647 kb on + strand, within MPMX26_02372at 2456.678 kb on + strand, within MPMX26_02372at 2456.678 kb on + strand, within MPMX26_02372at 2456.678 kb on + strand, within MPMX26_02372at 2456.940 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Proline (N)
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2,453,111 - -0.1
2,453,121 - +0.3
2,453,121 - -0.6
2,453,121 - +0.4
2,453,121 - -0.5
2,453,121 - -0.2
2,453,121 - -0.3
2,453,121 - -0.3
2,453,121 - +0.1
2,453,121 - +0.7
2,453,121 - +0.3
2,453,133 - +0.4
2,453,138 - -0.9
2,453,156 - -0.4
2,453,156 - +0.3
2,453,156 - -0.4
2,453,156 - +0.1
2,453,180 - +0.1
2,453,180 - +0.5
2,453,208 - -0.7
2,453,210 - +0.3
2,453,210 - +0.5
2,453,302 - -0.3
2,453,316 - -0.6
2,453,331 - MPMX26_02370 0.13 +0.2
2,453,331 - MPMX26_02370 0.13 +0.1
2,453,333 - MPMX26_02370 0.13 +0.3
2,453,333 - MPMX26_02370 0.13 -0.1
2,453,363 - MPMX26_02370 0.18 -0.5
2,453,368 - MPMX26_02370 0.19 -0.1
2,453,396 - MPMX26_02370 0.24 +0.2
2,453,447 - MPMX26_02370 0.32 +0.2
2,453,448 - MPMX26_02370 0.33 -0.1
2,453,472 - MPMX26_02370 0.37 +0.4
2,453,472 - MPMX26_02370 0.37 +0.0
2,453,496 - MPMX26_02370 0.41 +0.0
2,453,582 - MPMX26_02370 0.56 +0.3
2,453,616 - MPMX26_02370 0.62 -0.0
2,453,639 - MPMX26_02370 0.65 +0.2
2,453,753 - MPMX26_02370 0.85 -0.1
2,453,753 - MPMX26_02370 0.85 +0.3
2,453,753 - MPMX26_02370 0.85 +0.9
2,453,760 - MPMX26_02370 0.86 +0.3
2,453,769 - MPMX26_02370 0.88 -0.5
2,453,769 - MPMX26_02370 0.88 -0.3
2,453,770 - MPMX26_02370 0.88 +0.4
2,453,778 - MPMX26_02370 0.89 -0.1
2,453,803 - +0.1
2,453,830 - -0.1
2,453,849 - +0.4
2,453,870 - +0.3
2,453,875 - -0.1
2,453,875 - -1.5
2,453,875 - +0.4
2,454,491 + MPMX26_02371 0.20 -0.1
2,454,491 + MPMX26_02371 0.20 +0.7
2,454,491 + MPMX26_02371 0.20 +0.4
2,454,537 + MPMX26_02371 0.23 -2.3
2,454,644 + MPMX26_02371 0.28 +0.3
2,455,025 + MPMX26_02371 0.47 +0.4
2,455,526 + MPMX26_02371 0.71 -0.9
2,455,937 + -1.1
2,455,988 + +2.1
2,456,134 + -0.4
2,456,134 + -0.6
2,456,167 + +0.5
2,456,167 + +0.4
2,456,167 + -0.3
2,456,167 + -0.1
2,456,167 + -1.7
2,456,179 + -1.4
2,456,179 + -0.1
2,456,179 + +0.9
2,456,179 + +0.1
2,456,242 + MPMX26_02372 0.17 +0.9
2,456,242 + MPMX26_02372 0.17 -0.1
2,456,242 + MPMX26_02372 0.17 -0.3
2,456,257 + MPMX26_02372 0.20 +0.8
2,456,257 + MPMX26_02372 0.20 +0.5
2,456,257 + MPMX26_02372 0.20 +0.5
2,456,272 + MPMX26_02372 0.22 +0.3
2,456,305 + MPMX26_02372 0.28 +0.2
2,456,329 + MPMX26_02372 0.31 +1.0
2,456,369 + MPMX26_02372 0.38 +0.2
2,456,468 + MPMX26_02372 0.54 +0.4
2,456,497 + MPMX26_02372 0.59 -0.9
2,456,502 + MPMX26_02372 0.59 +0.9
2,456,502 + MPMX26_02372 0.59 +1.3
2,456,502 + MPMX26_02372 0.59 +0.8
2,456,510 + MPMX26_02372 0.61 -0.8
2,456,530 + MPMX26_02372 0.64 -1.1
2,456,534 + MPMX26_02372 0.65 -0.0
2,456,534 + MPMX26_02372 0.65 +0.4
2,456,536 + MPMX26_02372 0.65 +0.1
2,456,546 + MPMX26_02372 0.67 +0.1
2,456,567 + MPMX26_02372 0.70 -0.2
2,456,577 + MPMX26_02372 0.72 -0.4
2,456,585 + MPMX26_02372 0.73 +0.3
2,456,604 + MPMX26_02372 0.76 -0.5
2,456,645 + MPMX26_02372 0.83 -0.2
2,456,645 + MPMX26_02372 0.83 +0.3
2,456,645 + MPMX26_02372 0.83 +0.3
2,456,645 + MPMX26_02372 0.83 -0.3
2,456,645 + MPMX26_02372 0.83 -0.1
2,456,645 + MPMX26_02372 0.83 +0.1
2,456,645 + MPMX26_02372 0.83 +0.3
2,456,645 + MPMX26_02372 0.83 +0.2
2,456,645 + MPMX26_02372 0.83 +0.5
2,456,645 + MPMX26_02372 0.83 +0.3
2,456,645 + MPMX26_02372 0.83 -0.9
2,456,645 + MPMX26_02372 0.83 -0.4
2,456,645 + MPMX26_02372 0.83 -1.3
2,456,645 + MPMX26_02372 0.83 -0.0
2,456,647 + MPMX26_02372 0.83 -0.2
2,456,678 + MPMX26_02372 0.88 -0.7
2,456,678 + MPMX26_02372 0.88 +0.3
2,456,678 + MPMX26_02372 0.88 -0.7
2,456,940 - -1.1

Or see this region's nucleotide sequence